Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
745,155 |
A→G |
intergenic (+33/‑3) |
ybgL → / → nei |
putative lactam utilization protein/Nei |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 745,155 | 0 | A | G | 100.0%
| 902.7
/ NA
| 260 | intergenic (+33/‑3) | ybgL/nei | putative lactam utilization protein/Nei |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (161/99); total (161/99) |
Only 100 of 261 total aligned reads displayed.
GTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCACCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCC > NC_000913/745065‑745244
|
gtccgcccgccGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGcc < 1:4358612/90‑1 (MQ=255)
gTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGcc < 2:1572541/93‑1 (MQ=255)
ttCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCa > 1:4541327/1‑93 (MQ=255)
ttCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCa > 2:4304920/1‑93 (MQ=255)
ttCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCa > 2:3028860/1‑93 (MQ=255)
tccgcccgccGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCa < 2:1177791/91‑1 (MQ=255)
ccccgccGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGc < 1:712575/92‑1 (MQ=255)
cccgccGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGcc > 1:6205853/1‑93 (MQ=255)
cccgccGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGcc > 1:2930358/1‑93 (MQ=255)
ccgACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGaa < 1:3222925/93‑1 (MQ=255)
cgACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAg < 2:353497/93‑1 (MQ=255)
gACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAgg > 2:5673555/1‑93 (MQ=255)
tACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGccc < 2:766304/93‑1 (MQ=255)
tACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGccc < 2:5780847/93‑1 (MQ=255)
tACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGccc > 1:3330310/1‑93 (MQ=255)
aCGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCg > 1:994937/1‑93 (MQ=255)
aCGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACACCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCg > 1:4202588/1‑93 (MQ=255)
cGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCgg < 1:2327247/93‑1 (MQ=255)
gCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGga > 2:3595067/1‑93 (MQ=255)
gCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGga > 1:848170/1‑93 (MQ=255)
tctGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGgaga < 2:6170266/93‑1 (MQ=255)
ctGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGAt > 1:1839317/1‑93 (MQ=255)
tGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATc > 1:2670067/1‑93 (MQ=255)
gCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATcc < 1:1037528/93‑1 (MQ=255)
gCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATcc > 1:4937383/1‑93 (MQ=255)
aTTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATccgc < 1:518325/93‑1 (MQ=255)
aTTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATccgc > 2:3399458/1‑93 (MQ=255)
ttGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAATAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATccgccg < 1:567917/93‑1 (MQ=255)
ttGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATccgccg > 2:6451619/1‑93 (MQ=255)
tGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGt < 2:5954431/93‑1 (MQ=255)
gCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTg < 1:3967355/93‑1 (MQ=255)
ccGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGc > 1:2013014/1‑93 (MQ=255)
ccGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGc < 2:2654779/93‑1 (MQ=255)
cGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCa > 1:2871303/1‑93 (MQ=255)
gAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAg > 1:3756201/1‑93 (MQ=255)
gAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAg > 2:2458158/1‑93 (MQ=255)
gAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAg > 2:3856260/1‑93 (MQ=255)
aaaaGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGc < 1:5493221/93‑1 (MQ=255)
aaaaGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGc > 2:4548129/1‑93 (MQ=255)
aaaaGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGc > 2:4969738/1‑93 (MQ=255)
aaaaGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATACCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGc > 1:1071276/1‑93 (MQ=255)
aaaGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCg > 1:2892299/1‑93 (MQ=255)
aaaGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCACCGTGCAGCg > 1:576502/1‑93 (MQ=255)
aaGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCgg > 1:573554/1‑93 (MQ=255)
aGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGa > 2:77545/1‑93 (MQ=255)
ggggATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGAt > 2:2387623/1‑93 (MQ=255)
aTTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAAcc > 2:6269257/1‑93 (MQ=255)
gttgtCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTgg < 2:1819260/93‑1 (MQ=255)
gtCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAgg > 2:805666/1‑93 (MQ=255)
gtCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAgg > 1:2785610/1‑93 (MQ=255)
gcagcaTAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAggcgg < 1:4102188/93‑1 (MQ=255)
gcagcaTAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAggcgg > 2:230403/1‑93 (MQ=255)
cagcaTAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAggcggc > 2:5456303/1‑93 (MQ=255)
gcaTAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGa > 1:1511731/1‑93 (MQ=255)
caTAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGAt < 2:211552/93‑1 (MQ=255)
aTACCCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATc < 1:175712/93‑1 (MQ=255)
aTAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATc > 2:451533/1‑93 (MQ=255)
tAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCa < 2:1395558/93‑1 (MQ=255)
aCCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCaaa < 2:3818936/93‑1 (MQ=255)
ccccGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAg > 2:4888129/1‑93 (MQ=255)
ccccGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAg < 1:6025873/93‑1 (MQ=255)
ccccGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAg < 2:3064131/93‑1 (MQ=255)
ccGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGc > 1:5931644/1‑93 (MQ=255)
ccGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGc > 2:130914/1‑93 (MQ=255)
gATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCaa < 1:2010695/93‑1 (MQ=255)
gATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCaa > 1:6437262/1‑93 (MQ=255)
ataaAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCAc > 2:2627258/1‑93 (MQ=255)
ataaAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCAc > 2:2803304/1‑93 (MQ=255)
ataaAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCAc > 2:195088/1‑93 (MQ=255)
ataaAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCAc > 1:2076878/1‑93 (MQ=255)
ataaAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCACCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCAc > 2:1068751/1‑93 (MQ=255)
aaaGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTa > 1:5887091/1‑93 (MQ=255)
aaaGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTa > 1:2635101/1‑93 (MQ=255)
aaaGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTa > 1:4479889/1‑93 (MQ=255)
aGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAAc > 1:5105741/1‑93 (MQ=255)
aGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAAc > 2:5393383/1‑93 (MQ=255)
aGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAAc > 1:2562731/1‑93 (MQ=255)
gAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAAACACTAACt > 1:912055/1‑93 (MQ=255)
aaTGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGGTCCGCCGTGCAGCGGATAACCTGGAGGCCGCGATCAAAGGCATACCACTAACTg > 1:2246397/1‑93 (MQ=255)
aaTGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTg > 1:4010301/1‑93 (MQ=255)
tGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGAt < 2:3965350/93‑1 (MQ=255)
gAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATg > 1:1908355/1‑93 (MQ=255)
aaaaaGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTc < 2:2102023/93‑1 (MQ=255)
aaaaaGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTc > 1:4909246/1‑93 (MQ=255)
aaaaGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCt > 1:3429384/1‑93 (MQ=255)
aaaaGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCt > 2:3386645/1‑93 (MQ=255)
aaaGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTg < 2:1476180/93‑1 (MQ=255)
aaaGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTg > 2:1681236/1‑93 (MQ=255)
aaaGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTg > 2:4129593/1‑93 (MQ=255)
aaGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTgg > 1:4455429/1‑93 (MQ=255)
aaGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTgg > 1:6158453/1‑93 (MQ=255)
aaGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTgg < 2:445392/93‑1 (MQ=255)
aGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAATCACTAACTGATGTCTGGt > 2:5863459/1‑93 (MQ=255)
ggATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGtt < 1:3470558/93‑1 (MQ=255)
tatCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGc < 1:781996/93‑1 (MQ=255)
tatCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGc > 2:4029552/1‑93 (MQ=255)
tatCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGc > 1:3323354/1‑93 (MQ=255)
atCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGGTGTCTGGTTTGcc > 2:3667224/1‑93 (MQ=255)
atCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGcc < 2:5653431/93‑1 (MQ=255)
atCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGcc > 1:1549858/1‑93 (MQ=255)
|
GTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCACCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCC > NC_000913/745065‑745244
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCACCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCTTCC > NC_000913/745062‑745248
|
ggtgtcccCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCG < SRR4302534.4227530/86‑1 (MQ=60)
GGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCG < SRR4302534.2687493/94‑1 (MQ=60)
GGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCG > SRR4302534.5030927/1‑94 (MQ=60)
GGCGTCCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCG < SRR4302534.1331854/94‑1 (MQ=60)
GTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCA > SRR4302534.4664427/1‑94 (MQ=60)
GTCCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCA < SRR4302534.4476208/94‑1 (MQ=60)
GCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCC > SRR4302534.1506228/1‑94 (MQ=60)
GCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCC > SRR4302534.3007289/1‑94 (MQ=60)
GCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCC > SRR4302534.6374589/1‑94 (MQ=60)
CCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCC < SRR4302534.730092/94‑1 (MQ=60)
CCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTG > SRR4302534.978431/1‑94 (MQ=60)
CGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGA < SRR4302534.6006417/94‑1 (MQ=60)
CCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAG < SRR4302534.3308514/94‑1 (MQ=60)
CGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGG > SRR4302534.2985815/1‑94 (MQ=60)
ACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCC < SRR4302534.4651607/94‑1 (MQ=60)
CTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCC > SRR4302534.3924920/1‑94 (MQ=60)
CTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCC > SRR4302534.3419386/1‑94 (MQ=60)
TACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCG > SRR4302534.1020412/1‑94 (MQ=60)
TACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCG > SRR4302534.2948163/1‑94 (MQ=60)
TACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACACCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCG > SRR4302534.4316051/1‑94 (MQ=60)
CGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGA > SRR4302534.869549/1‑94 (MQ=60)
CGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGA < SRR4302534.2388997/94‑1 (MQ=60)
CTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGA > SRR4302534.3202807/1‑94 (MQ=60)
TCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGAT > SRR4302534.1887133/1‑94 (MQ=60)
CTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATC > SRR4302534.2740638/1‑94 (MQ=60)
TGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCC > SRR4302534.5071171/1‑94 (MQ=60)
GCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCG < SRR4302534.4292041/94‑1 (MQ=60)
GCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCG < SRR4302534.1064305/94‑1 (MQ=60)
CATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGC > SRR4302534.2649093/1‑94 (MQ=60)
ATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCC > SRR4302534.2776764/1‑94 (MQ=60)
ATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCC < SRR4302534.531209/94‑1 (MQ=60)
TTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAATAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGT < SRR4302534.581859/94‑1 (MQ=60)
TTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGT > SRR4302534.3426711/1‑94 (MQ=60)
TTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGT < SRR4302534.4731411/94‑1 (MQ=60)
GCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGC > SRR4302534.2065684/1‑94 (MQ=60)
GCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGC < SRR4302534.4073555/94‑1 (MQ=60)
CCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCA < SRR4302534.1075848/94‑1 (MQ=60)
CCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCA > SRR4302534.2946695/1‑94 (MQ=60)
CGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAG > SRR4302534.3857053/1‑94 (MQ=60)
CGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAG < SRR4302534.4580710/94‑1 (MQ=60)
GAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGC > SRR4302534.789240/1‑94 (MQ=60)
GAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATACCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGC > SRR4302534.1099064/1‑94 (MQ=60)
GAAAAGGGGATTGATGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGC > SRR4302534.1019711/1‑94 (MQ=60)
AAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCG > SRR4302534.2968200/1‑94 (MQ=60)
AAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCG < SRR4302534.5641348/94‑1 (MQ=60)
AAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGACGTGCAGAG > SRR4302534.2716375/1‑94 (MQ=60)
AAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCACCGTGCAGCG > SRR4302534.590647/1‑94 (MQ=60)
AAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGG > SRR4302534.587630/1‑94 (MQ=60)
AAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGA > SRR4302534.1740553/1‑94 (MQ=60)
AAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGA > SRR4302534.3357154/1‑94 (MQ=60)
AAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGA < SRR4302534.4156325/94‑1 (MQ=60)
AAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGA > SRR4302534.5012995/1‑94 (MQ=60)
GGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATA > SRR4302534.5912022/1‑94 (MQ=60)
GGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAAC > SRR4302534.2071659/1‑94 (MQ=60)
TTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCAGTGCAGCGGATAACCTG < SRR4302534.6039136/94‑1 (MQ=60)
TTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAG < SRR4302534.4489882/94‑1 (MQ=60)
TTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCAGGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAG < SRR4302534.2063778/94‑1 (MQ=60)
TGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGG > SRR4302534.2858875/1‑94 (MQ=60)
TGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGG > SRR4302534.6081127/1‑94 (MQ=60)
GTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGC > SRR4302534.4125877/1‑94 (MQ=60)
GTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGC > SRR4302534.5894077/1‑94 (MQ=60)
TCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCG < SRR4302534.2102698/94‑1 (MQ=60)
CGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGG > SRR4302534.2735517/1‑94 (MQ=60)
GCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGC < SRR4302534.2497455/94‑1 (MQ=60)
GCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGC < SRR4302534.4212496/94‑1 (MQ=60)
CAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCG > SRR4302534.5864972/1‑94 (MQ=60)
CAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCG > SRR4302534.5255169/1‑94 (MQ=60)
AGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGA > SRR4302534.885573/1‑94 (MQ=60)
AGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGA > SRR4302534.1551478/1‑94 (MQ=60)
GCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGAT < SRR4302534.6577468/94‑1 (MQ=60)
CATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATC < SRR4302534.628299/94‑1 (MQ=60)
CATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATC < SRR4302534.1809164/94‑1 (MQ=60)
ATACCCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCA < SRR4302534.180337/94‑1 (MQ=60)
ATAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCA > SRR4302534.2008135/1‑94 (MQ=60)
TAACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAA > SRR4302534.2837568/1‑94 (MQ=60)
AACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAA > SRR4302534.5687008/1‑94 (MQ=60)
ACCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAG > SRR4302534.3144631/1‑94 (MQ=60)
CCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGG < SRR4302534.3557167/94‑1 (MQ=60)
CCCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGG < SRR4302534.6189628/94‑1 (MQ=60)
CCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGC > SRR4302534.4612942/1‑94 (MQ=60)
CCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGC > SRR4302534.6092726/1‑94 (MQ=60)
CCCGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGC > SRR4302534.4487644/1‑94 (MQ=60)
CGATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAA > SRR4302534.6610761/1‑94 (MQ=60)
GATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAA < SRR4302534.2063299/94‑1 (MQ=60)
ATTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAAC > SRR4302534.881652/1‑94 (MQ=60)
TTAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACC < SRR4302534.355116/94‑1 (MQ=60)
TAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGCTCAAAGGCAAACCC > SRR4302534.6333564/1‑94 (MQ=60)
TAATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGAAAACCA > SRR4302534.6111403/1‑94 (MQ=60)
AATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGCTCAAAGGCAAACCAC > SRR4302534.138296/1‑94 (MQ=60)
AATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCAC > SRR4302534.2131255/1‑94 (MQ=60)
AATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCAC > SRR4302534.6628679/1‑94 (MQ=60)
ATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACT > SRR4302534.5124759/1‑94 (MQ=60)
ATAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACT > SRR4302534.2547936/1‑94 (MQ=60)
TAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTA > SRR4302534.860383/1‑94 (MQ=60)
TAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTA > SRR4302534.6046937/1‑94 (MQ=60)
TAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTA > SRR4302534.2704822/1‑94 (MQ=60)
TAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTA > SRR4302534.4601086/1‑94 (MQ=60)
TAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTA < SRR4302534.3415621/94‑1 (MQ=60)
TAAAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTA < SRR4302534.6178224/94‑1 (MQ=60)
AAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCTAAGGCAAACCACTAAC > SRR4302534.4413319/1‑94 (MQ=60)
AAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAAC > SRR4302534.2630648/1‑94 (MQ=60)
AAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAAC > SRR4302534.5222210/1‑94 (MQ=60)
AAGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAAC > SRR4302534.5243529/1‑94 (MQ=60)
AGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACT > SRR4302534.787988/1‑94 (MQ=60)
AGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACT > SRR4302534.5058810/1‑94 (MQ=60)
AGAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAAACACTAACT > SRR4302534.935254/1‑94 (MQ=60)
GAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGGTCCGCCGTGCAGCGGATAACCTGGAGGCCGCGATCAAAGGCATACCACTAACTG > SRR4302534.2305938/1‑94 (MQ=60)
GAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTG > SRR4302534.4117692/1‑94 (MQ=60)
GAATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTG < SRR4302534.3403125/94‑1 (MQ=60)
AATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGA < SRR4302534.569052/94‑1 (MQ=60)
AATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGA > SRR4302534.1846699/1‑94 (MQ=60)
AATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGA > SRR4302534.4238540/1‑94 (MQ=60)
AATGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGA < SRR4302534.3685724/94‑1 (MQ=60)
TGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATG > SRR4302534.1958156/1‑94 (MQ=60)
TGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATG > SRR4302534.2966497/1‑94 (MQ=60)
TGAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATG < SRR4302534.2892604/94‑1 (MQ=60)
GAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGT < SRR4302534.2180291/94‑1 (MQ=60)
GAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGT > SRR4302534.1798771/1‑94 (MQ=60)
GAAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGT < SRR4302534.2304181/94‑1 (MQ=60)
AAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTC > SRR4302534.5042305/1‑94 (MQ=60)
AAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTC > SRR4302534.5612471/1‑94 (MQ=60)
AAAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTAATGTC > SRR4302534.2045944/1‑94 (MQ=60)
AAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCT < SRR4302534.1957692/94‑1 (MQ=60)
AAAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCT > SRR4302534.3521516/1‑94 (MQ=60)
AAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTG > SRR4302534.6425796/1‑94 (MQ=60)
AAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTG > SRR4302534.3979441/1‑94 (MQ=60)
AAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTG < SRR4302534.4075254/94‑1 (MQ=60)
AAAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTG > SRR4302534.1557681/1‑94 (MQ=60)
AAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGG > SRR4302534.6325956/1‑94 (MQ=60)
AAAGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGG > SRR4302534.4575867/1‑94 (MQ=60)
AGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCACACCACTAACTAATGTCCGGTT > SRR4302534.6335261/1‑94 (MQ=60)
AGGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTT > SRR4302534.5529889/1‑94 (MQ=60)
GGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTT < SRR4302534.3563838/94‑1 (MQ=60)
GGATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTT > SRR4302534.2325888/1‑94 (MQ=60)
ATATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGC > SRR4302534.3412232/1‑94 (MQ=60)
TATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCC > SRR4302534.3442306/1‑94 (MQ=60)
TATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCC < SRR4302534.801500/94‑1 (MQ=60)
TATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCC > SRR4302534.1590468/1‑94 (MQ=60)
ATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCT > SRR4302534.3618100/1‑94 (MQ=60)
ATCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCT > SRR4302534.2308603/1‑94 (MQ=60)
TCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCTT > SRR4302534.2914474/1‑94 (MQ=60)
TCGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCTT > SRR4302534.933402/1‑94 (MQ=60)
CGCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCTTC > SRR4302534.1027771/1‑94 (MQ=60)
GCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCTTCC > SRR4302534.1655783/1‑94 (MQ=60)
GCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCTTCC > SRR4302534.66874/1‑94 (MQ=60)
GCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCTTCC > SRR4302534.233729/1‑94 (MQ=60)
GCCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCTTCC < SRR4302534.4145337/94‑1 (MQ=60)
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GGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCACCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCTTCC > NC_000913/745062‑745248
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
