Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
850,482 |
A→T |
F447I (TTC→ATC) |
ybiP ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 850,482 | 0 | A | T | 100.0%
| 734.4
/ NA
| 188 | F447I (TTC→ATC) | ybiP | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (111/77); total (111/77) |
Only 100 of 192 total aligned reads displayed.
AAAAGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGAAATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCA > NC_000913/850392‑850571
|
aaaaGCCTGAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGatat > 2:6239056/1‑93 (MQ=255)
ggCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATAtttt > 2:3343901/2‑93 (MQ=255)
aGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACTATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATAtttt < 2:4510570/93‑1 (MQ=255)
aGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATAtttt < 2:3978788/93‑1 (MQ=255)
aGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATAtttt > 2:4291004/1‑93 (MQ=255)
aGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATAtttt < 2:5901613/93‑1 (MQ=255)
ccTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGc < 2:5279498/93‑1 (MQ=255)
aagaagTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGa < 1:288495/93‑1 (MQ=255)
aagaagTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGa > 1:5019727/1‑93 (MQ=255)
aagaagTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGa < 1:2386356/93‑1 (MQ=255)
agaagTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGat > 2:300957/1‑93 (MQ=255)
aagTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGatat < 2:168652/93‑1 (MQ=255)
aagTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGatat < 1:4592215/93‑1 (MQ=255)
agTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATAtt < 2:4681140/93‑1 (MQ=255)
agTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATAtt < 1:369410/93‑1 (MQ=255)
agTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATAtt > 2:2290331/1‑93 (MQ=255)
gTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATAttt > 1:4656382/1‑93 (MQ=255)
taaTTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTa > 1:4051599/3‑93 (MQ=255)
aTTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTatc > 2:6152098/1‑93 (MQ=255)
tGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCTTg > 2:1731304/1‑93 (MQ=255)
tGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATg < 2:3651955/93‑1 (MQ=255)
gAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATgg < 1:4193529/93‑1 (MQ=255)
ggcggGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCaa < 1:1660463/93‑1 (MQ=255)
gcggGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAg > 2:4249279/1‑93 (MQ=255)
gcggGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAg > 2:3028072/1‑93 (MQ=255)
gcggGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAg < 1:3123159/93‑1 (MQ=255)
gggCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGt < 2:1853193/93‑1 (MQ=255)
ggCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTa < 1:4076384/93‑1 (MQ=255)
gCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTAt > 2:1237073/1‑93 (MQ=255)
gCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTAt > 2:1286139/1‑93 (MQ=255)
cTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTAtt > 1:632376/1‑93 (MQ=255)
ttAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGc > 1:5919071/1‑93 (MQ=255)
tAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCa > 2:4982551/1‑93 (MQ=255)
tAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCa > 1:5797879/1‑93 (MQ=255)
aaTCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCAc > 1:15840/1‑93 (MQ=255)
aTCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACg > 1:5263156/1‑93 (MQ=255)
tCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGt > 2:4480578/1‑93 (MQ=255)
tCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGt > 2:2297235/1‑93 (MQ=255)
cacaCGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTc < 2:3631216/93‑1 (MQ=255)
acacGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCt < 2:6465649/93‑1 (MQ=255)
acacGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCt < 2:4837989/93‑1 (MQ=255)
acacGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCt < 1:2671182/93‑1 (MQ=255)
cacGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCtt > 2:3044176/1‑93 (MQ=255)
cacGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCtt > 2:4718316/1‑93 (MQ=255)
cacGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCtt > 2:1459662/1‑93 (MQ=255)
cGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTa > 1:2559423/1‑93 (MQ=255)
cGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTa > 2:5187168/1‑93 (MQ=255)
gATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTAc < 2:5994487/93‑1 (MQ=255)
gATGAGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTAc > 1:3759624/1‑93 (MQ=255)
aTGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTAcc < 2:5320004/93‑1 (MQ=255)
tGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACcg > 2:3226043/1‑93 (MQ=255)
tGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACcg > 2:767268/1‑93 (MQ=255)
cgcTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACcgcg > 2:3391341/1‑93 (MQ=255)
cgcTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATAGGCAAGGTATTGCACGTCTTTACcgcg > 2:5552694/1‑93 (MQ=255)
cTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGct < 2:3892929/93‑1 (MQ=255)
tttATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGctc < 1:958088/93‑1 (MQ=255)
tATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCtt > 1:1443324/1‑93 (MQ=255)
tATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCtt < 1:4185101/93‑1 (MQ=255)
tATCGTCCCTGGAAATGACCATAAAAGGCACCTCGATATTTTGCTGATATTTATCAGCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCtt < 1:4687837/93‑1 (MQ=255)
tcgtcgCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTa > 2:2717263/1‑93 (MQ=255)
cgtcgCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATcatcat < 1:3141735/57‑1 (MQ=255)
cgtcgCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATcatcat > 2:3141735/1‑57 (MQ=255)
gtcgCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTaaa < 1:5657291/93‑1 (MQ=255)
gCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGc > 2:3949465/1‑93 (MQ=255)
gCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGc < 2:2571114/93‑1 (MQ=255)
cTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGcc < 1:1170481/93‑1 (MQ=255)
cTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGcc > 1:3214753/1‑93 (MQ=255)
cTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGcc < 1:1830716/93‑1 (MQ=255)
tGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCa > 1:3327311/1‑93 (MQ=255)
tGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCa < 1:2072345/93‑1 (MQ=255)
tGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCa > 2:1970800/1‑93 (MQ=255)
aaaTGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGAc > 1:1930479/1‑93 (MQ=255)
aaaTGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGAc < 1:1013238/93‑1 (MQ=255)
aaTGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGAcc > 1:35644/1‑93 (MQ=255)
tGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGt > 1:1728794/1‑93 (MQ=255)
gACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTTAAGGCCAGACCGTg > 1:613054/1‑93 (MQ=255)
gACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTg < 1:5500432/93‑1 (MQ=255)
aCCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTTAATGCCAGACCGTgt > 1:5383724/1‑92 (MQ=255)
ccATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGt < 2:1300526/93‑1 (MQ=255)
aTAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCa > 1:1352889/1‑93 (MQ=255)
tAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAg > 1:298324/1‑93 (MQ=255)
aaaaGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGa > 1:4707548/1‑93 (MQ=255)
aaaGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGaa > 2:3479824/1‑93 (MQ=255)
aaGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGaaa > 1:3607067/1‑93 (MQ=255)
aaGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGaaa < 2:5740513/93‑1 (MQ=255)
aGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGaaaa > 2:5272594/1‑93 (MQ=255)
ggCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAg > 2:4455441/1‑93 (MQ=255)
cACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTa > 1:866152/1‑93 (MQ=255)
aCCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTaa > 1:247526/1‑93 (MQ=255)
aCCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTaa < 2:4906778/93‑1 (MQ=255)
aCCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTaa < 1:5559959/93‑1 (MQ=255)
aCCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTaa > 2:1182245/1‑93 (MQ=255)
aCCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTaa > 2:6059361/1‑93 (MQ=255)
ccTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTaaa > 1:187122/1‑93 (MQ=255)
cTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAAc > 2:420548/1‑93 (MQ=255)
tGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAAcc > 2:6368901/1‑93 (MQ=255)
tGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAAcc < 1:5762561/93‑1 (MQ=255)
tGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAAcc > 1:682146/1‑93 (MQ=255)
ggATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCa > 2:2085971/1‑93 (MQ=255)
ggATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCa > 1:4712116/1‑93 (MQ=255)
|
AAAAGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGAAATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCA > NC_000913/850392‑850571
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGAAAAAGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGAAATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCAGCG > NC_000913/850389‑850574
|
AGAAAAAGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGAT > SRR4302534.4882839/1‑94 (MQ=60)
AAAAAGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATAT > SRR4302534.3690201/1‑94 (MQ=60)
AAAAGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATT > SRR4302534.3262173/1‑94 (MQ=60)
AAAGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTT < SRR4302534.6181532/94‑1 (MQ=60)
TAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGA > SRR4302534.4743826/1‑94 (MQ=60)
TAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGA > SRR4302534.5155349/1‑94 (MQ=60)
AAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGAT > SRR4302534.821505/1‑94 (MQ=60)
AAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGAT < SRR4302534.2449765/94‑1 (MQ=60)
AAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGAT < SRR4302534.295957/94‑1 (MQ=60)
AGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATA > SRR4302534.191963/1‑94 (MQ=60)
GAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATAT < SRR4302534.1251862/94‑1 (MQ=60)
GAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATAT < SRR4302534.5078213/94‑1 (MQ=60)
AAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATT < SRR4302534.4716843/94‑1 (MQ=60)
AGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTT > SRR4302534.4782795/1‑94 (MQ=60)
AGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTT < SRR4302534.378829/94‑1 (MQ=60)
GTAATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTA > SRR4302534.4160265/1‑94 (MQ=60)
ATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATTGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTgtct > SRR4302534.4611218/1‑90 (MQ=60)
ATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCA < SRR4302534.631824/94‑1 (MQ=60)
ATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCA < SRR4302534.3654202/94‑1 (MQ=60)
ATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCA > SRR4302534.4801127/1‑94 (MQ=60)
TTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCAT > SRR4302534.217909/1‑94 (MQ=60)
TGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATC > SRR4302534.4817112/1‑94 (MQ=60)
GCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCAT < SRR4302534.3122759/94‑1 (MQ=60)
ctttccctacacgacgctcttccgatctatagattTCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATG < SRR4302534.3224367/59‑1 (MQ=60)
CTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATG > SRR4302534.2682285/1‑94 (MQ=60)
TGAGCGGCGGGCTTTAATCTCTCTAGGCGCTTTATCGTCGCTGGAATTGACCATAAAAGGCATCCGTATATCTTGCGGATATTTATCATCATGG > SRR4302534.6653863/1‑94 (MQ=32)
TGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGG > SRR4302534.5442849/1‑94 (MQ=60)
GAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGG < SRR4302534.4306817/94‑1 (MQ=60)
GCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCA < SRR4302534.1436882/94‑1 (MQ=60)
GGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAG < SRR4302534.1703714/94‑1 (MQ=60)
GCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGG < SRR4302534.3205260/94‑1 (MQ=60)
CGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGT > SRR4302534.1962647/1‑94 (MQ=60)
GGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTAT < SRR4302534.4185782/94‑1 (MQ=60)
GGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTAT > SRR4302534.662560/1‑94 (MQ=60)
GCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATT > SRR4302534.647719/1‑94 (MQ=60)
GCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATT < SRR4302534.4281552/94‑1 (MQ=60)
CTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTG < SRR4302534.962788/94‑1 (MQ=60)
TTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGC > SRR4302534.6079786/1‑94 (MQ=60)
TTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCA < SRR4302534.3393239/94‑1 (MQ=60)
TTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCA > SRR4302534.5955205/1‑94 (MQ=60)
TAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCAC < SRR4302534.5952137/94‑1 (MQ=60)
TAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCAC > SRR4302534.16264/1‑94 (MQ=60)
AATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACG > SRR4302534.5405340/1‑94 (MQ=60)
AATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACG < SRR4302534.3972417/94‑1 (MQ=60)
TCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTC < SRR4302534.5279945/94‑1 (MQ=60)
ACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTT < SRR4302534.2741778/94‑1 (MQ=60)
ACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTT < SRR4302534.2453127/94‑1 (MQ=60)
ACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTA > SRR4302534.2627266/1‑94 (MQ=60)
CGATGAGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTAC > SRR4302534.3860581/1‑94 (MQ=60)
CGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGC > SRR4302534.5763747/1‑94 (MQ=60)
GCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCT < SRR4302534.3038547/94‑1 (MQ=60)
CTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGGATTGCACGTCTTTACCGCGCTT > SRR4302534.1827903/1‑94 (MQ=60)
TTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCT < SRR4302534.982497/94‑1 (MQ=60)
TTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTT > SRR4302534.1481314/1‑94 (MQ=60)
TATCGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTT < SRR4302534.4298205/94‑1 (MQ=60)
TATCGTCCCTGGAAATGACCATAAAAGGCACCTCGATATTTTGCTGATATTTATCAGCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTT < SRR4302534.4815081/94‑1 (MQ=60)
ATCGTCGGTGGAAATGTCCATAAAAGCCGCATGGATATTTTGCTGATATTTATCATCATGGGAAAGGTAGTGCGCGTCTTTGCCGCGCTCTTTA < SRR4302534.4308649/94‑1 (MQ=42)
CGTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAA < SRR4302534.1554884/94‑1 (MQ=60)
GTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAG > SRR4302534.3835132/1‑94 (MQ=60)
GTCGCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAG < SRR4302534.5810444/94‑1 (MQ=60)
GCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCC > SRR4302534.3787587/1‑94 (MQ=60)
GCTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCC > SRR4302534.3300075/1‑94 (MQ=60)
CTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCA > SRR4302534.429631/1‑94 (MQ=60)
CTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCA < SRR4302534.1201242/94‑1 (MQ=60)
CTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCA < SRR4302534.1878329/94‑1 (MQ=60)
CTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCA < SRR4302534.5579700/94‑1 (MQ=60)
CTGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCA > SRR4302534.3416293/1‑94 (MQ=60)
TGGAAATGGCCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAG < SRR4302534.320442/94‑1 (MQ=60)
TGGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAG < SRR4302534.2126564/94‑1 (MQ=60)
GGAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGA > SRR4302534.5868544/1‑94 (MQ=60)
GAAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGAC > SRR4302534.1980952/1‑94 (MQ=60)
AAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACC > SRR4302534.36587/1‑94 (MQ=60)
AAATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACC < SRR4302534.1039311/94‑1 (MQ=60)
ATGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGT > SRR4302534.1773684/1‑94 (MQ=60)
TGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTTAAGGCCAGACCGTG > SRR4302534.627950/1‑94 (MQ=60)
TGACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTG > SRR4302534.2092797/1‑94 (MQ=60)
GACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTTAATGCCAGACCGTGT > SRR4302534.5528743/1‑94 (MQ=60)
GACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGG < SRR4302534.5648768/94‑1 (MQ=60)
GACCATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGG > SRR4302534.2888305/1‑94 (MQ=60)
CATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCA > SRR4302534.1388551/1‑94 (MQ=60)
ATAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAG > SRR4302534.306035/1‑94 (MQ=60)
TAAAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGA > SRR4302534.4835346/1‑94 (MQ=60)
AAAGGCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAA > SRR4302534.3704069/1‑94 (MQ=60)
GCACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTA > SRR4302534.888025/1‑94 (MQ=60)
CACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAA > SRR4302534.253993/1‑94 (MQ=60)
CACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAA > SRR4302534.6047753/1‑94 (MQ=60)
ACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAA < SRR4302534.5710070/94‑1 (MQ=60)
ACCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAA > SRR4302534.192033/1‑94 (MQ=60)
CCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCTAGACCGTGGTCAGAAAAGTAAAC > SRR4302534.4836801/1‑94 (MQ=60)
CCTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAAC > SRR4302534.1743116/1‑94 (MQ=60)
CTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACC < SRR4302534.1639019/94‑1 (MQ=60)
CTGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACC > SRR4302534.698806/1‑94 (MQ=60)
TGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCA < SRR4302534.5918890/94‑1 (MQ=60)
TGGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCA > SRR4302534.4840083/1‑94 (MQ=60)
GGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCAG > SRR4302534.6204617/1‑94 (MQ=60)
GGATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCAG > SRR4302534.45802/1‑94 (MQ=60)
GATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCAGC > SRR4302534.2033842/1‑94 (MQ=60)
GATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCAGC > SRR4302534.934496/1‑94 (MQ=60)
ATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCAGCG > SRR4302534.4991516/1‑94 (MQ=60)
ATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCAGCG > SRR4302534.4274372/1‑94 (MQ=60)
ATATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACAAGCG > SRR4302534.249258/1‑94 (MQ=60)
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AGAAAAAGCCTAAGAAGTCATTGGCTGAGCGGCGGGCTTTAATCACACGATGCGCTTTATCGTCGCTGGAAATGACCATAAAAGGCACCTGGAAATTTTGCTGATATTTATCATCATGGGCAAGGTATTGCACGTCTTTACCGCGCTCTTTAAAGGCCAGACCGTGGTCAGAAAAGTAAACCAGCG > NC_000913/850389‑850574
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
