Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
914,564 |
T→C |
intergenic (‑436/+11) |
ybjE ← / ← aqpZ |
putative surface protein/transmembrane water channel |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 914,564 | 0 | T | C | 100.0%
| 765.6
/ NA
| 217 | intergenic (‑436/+11) | ybjE/aqpZ | putative surface protein/transmembrane water channel |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (118/99); total (118/99) |
Only 100 of 222 total aligned reads displayed.
TATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAAC > NC_000913/914474‑914653
|
tatGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTc < 2:3946550/93‑1 (MQ=255)
atGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCctct > 2:723227/1‑93 (MQ=255)
atGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCctct < 1:2732173/93‑1 (MQ=255)
atGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCctct > 2:3424211/1‑93 (MQ=255)
tGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTg < 2:5974440/93‑1 (MQ=255)
gTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGc < 1:6131066/93‑1 (MQ=255)
gTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGc < 2:1665863/93‑1 (MQ=255)
ttGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCg < 2:2459532/93‑1 (MQ=255)
tGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGt < 1:3921411/93‑1 (MQ=255)
gCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGtt < 1:5017788/93‑1 (MQ=255)
ttAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGttaa < 1:4917719/93‑1 (MQ=255)
aGCTCATGAAAGGAGCGCAACAAAATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGttaatt < 1:1196544/93‑1 (MQ=255)
cATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATc < 2:5820250/93‑1 (MQ=255)
tGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCAc > 2:3601701/1‑93 (MQ=255)
gAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACg > 1:1323699/1‑93 (MQ=255)
aaaGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGc < 2:4646698/93‑1 (MQ=255)
ggAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCttt < 1:4459919/93‑1 (MQ=255)
gcgcAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTcc > 2:1787545/1‑93 (MQ=255)
gcgcAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTcc < 2:1238902/93‑1 (MQ=255)
gcAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCcag > 2:3660657/1‑93 (MQ=255)
aacaaGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCcagca > 2:4822373/1‑93 (MQ=255)
acaaGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCcagcag > 1:4548768/1‑93 (MQ=255)
aGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGt < 1:1602596/93‑1 (MQ=255)
atgatgAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTcc < 2:5935700/93‑1 (MQ=255)
gatgaATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCgg < 1:6405488/93‑1 (MQ=255)
atgaATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGt > 2:4039264/1‑93 (MQ=255)
atgaATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGt < 2:4537141/93‑1 (MQ=255)
atgaATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGt > 1:4153603/1‑93 (MQ=255)
gaATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTaa > 1:3774106/1‑93 (MQ=255)
aaTCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTaaa > 2:233745/1‑93 (MQ=255)
tCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATc > 2:2884373/1‑93 (MQ=255)
tCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATc < 2:4126777/93‑1 (MQ=255)
aaCATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAg > 1:6438557/1‑93 (MQ=255)
aaCATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAg > 1:5691199/1‑93 (MQ=255)
aaCATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAg < 2:4438979/93‑1 (MQ=255)
aCATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAgc > 1:4030840/1‑92 (MQ=255)
aCATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGa < 1:3683980/93‑1 (MQ=255)
atatAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGacc > 2:3883732/1‑93 (MQ=255)
tataACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGacca < 2:5440244/93‑1 (MQ=255)
tataACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGacca > 1:3294343/1‑93 (MQ=255)
tataACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGacca > 2:1337221/1‑93 (MQ=255)
ataACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGaccac > 1:5147278/1‑93 (MQ=255)
aacaacATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCg > 2:5091222/1‑93 (MQ=255)
aacaacATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCg < 1:2653407/93‑1 (MQ=255)
aacaacATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCg > 1:4734423/1‑93 (MQ=255)
aacaacATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCg < 2:1065353/93‑1 (MQ=255)
acaacaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGa < 2:3000345/93‑1 (MQ=255)
acaacaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGa > 1:4613089/1‑93 (MQ=255)
caacaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGaa > 2:2002103/1‑92 (MQ=255)
caacaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGAt > 1:3086338/1‑93 (MQ=255)
aacaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATa > 1:400700/1‑93 (MQ=255)
aacaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATa > 2:1588666/1‑93 (MQ=255)
acaTCTTAAAAAAAGGCCTGACGTTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATaa < 2:2030430/93‑1 (MQ=255)
acaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATaa > 1:3412401/1‑93 (MQ=255)
caTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAAt > 2:3348461/1‑93 (MQ=255)
caTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAAt < 2:2707895/93‑1 (MQ=255)
caTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAAt < 1:6423800/93‑1 (MQ=255)
caTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAAt > 2:4182449/1‑93 (MQ=255)
aTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATg < 2:2239554/93‑1 (MQ=255)
aTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATg > 1:201183/1‑93 (MQ=255)
tCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATgc < 1:3041454/93‑1 (MQ=255)
cTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATgcc > 2:3732173/1‑93 (MQ=255)
ttAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATgccg < 1:5351034/93‑1 (MQ=255)
tAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATgccgc < 1:3316831/93‑1 (MQ=255)
aaaaaaaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATgccgcc < 2:4064447/93‑1 (MQ=255)
aaaaaaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGccgccg < 2:5295128/93‑1 (MQ=255)
aaaaaaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGccgccg > 2:3143523/1‑93 (MQ=255)
aaaaaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGa > 1:1656824/1‑93 (MQ=255)
aaaaaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGa > 1:6175623/1‑93 (MQ=255)
aaaaaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGa > 2:6171088/1‑93 (MQ=255)
aaaaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGAc > 1:2424295/1‑93 (MQ=255)
aaaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACa > 1:3740959/1‑93 (MQ=255)
aaaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACa > 2:757151/1‑93 (MQ=255)
aaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACaa > 1:1718598/1‑93 (MQ=255)
aaGGCCTGACATTACGCCACGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACaa > 1:6284323/1‑93 (MQ=255)
aGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAAt > 2:606417/1‑93 (MQ=255)
ggCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAAtt > 2:3820280/1‑93 (MQ=255)
ggCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAAtt > 2:1492388/1‑93 (MQ=255)
ggCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAAtt > 1:5220901/1‑93 (MQ=255)
ccTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTgg > 1:6007662/1‑93 (MQ=255)
cTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGc > 2:4843430/1‑93 (MQ=255)
tGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGca < 2:6417227/93‑1 (MQ=255)
tGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGca > 2:2053324/1‑93 (MQ=255)
tGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGca > 2:4312069/1‑93 (MQ=255)
tGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGca > 1:1356820/1‑93 (MQ=255)
aCATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGcacc < 2:1909666/93‑1 (MQ=255)
aCATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGcacc > 1:6109181/1‑93 (MQ=255)
aCATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGcacc > 1:5582370/1‑93 (MQ=255)
aTTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGcaccac > 1:1777696/1‑93 (MQ=255)
aTTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGcaccac > 2:4954853/1‑93 (MQ=255)
aTTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGCAAATCAGACCACCGATAATGCCGCCGACAATTGGcaccac < 1:5245948/93‑1 (MQ=255)
ttACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCaccacc > 1:3217100/1‑93 (MQ=255)
ttACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCaccacc < 1:3797691/93‑1 (MQ=255)
tgcGCCAGGCCCTCTGCGTTAATTAATCACGCTTTGCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCAccc < 2:5774918/91‑1 (MQ=255)
aCGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCa > 1:772142/1‑93 (MQ=255)
cGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCag > 1:1179109/1‑93 (MQ=255)
cAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCagaag > 2:3303470/1‑93 (MQ=255)
aGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCagaaga > 1:4355596/1‑93 (MQ=255)
ggCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAgaagaa > 2:4331185/1‑93 (MQ=255)
ggCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCAACACCCAgaagaa > 1:1275607/1‑93 (MQ=255)
|
TATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAAC > NC_000913/914474‑914653
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAACCACA > NC_000913/914471‑914657
|
CAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCC > SRR4302534.2506114/1‑94 (MQ=60)
CAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCC < SRR4302534.2305400/94‑1 (MQ=60)
AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCT < SRR4302534.3490925/94‑1 (MQ=60)
AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCT > SRR4302534.3602074/1‑94 (MQ=60)
AATATGTTGCTTAGATCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCT > SRR4302534.69997/1‑94 (MQ=60)
ATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTC < SRR4302534.4359939/94‑1 (MQ=60)
TATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCT < SRR4302534.3982179/94‑1 (MQ=60)
ATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTG < SRR4302534.2804208/94‑1 (MQ=60)
GTTGCTTAGCTCATGAAAGGATCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCG < SRR4302534.5316918/94‑1 (MQ=60)
GTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCG < SRR4302534.6297838/94‑1 (MQ=60)
TGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTT < SRR4302534.4026487/94‑1 (MQ=60)
TGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTT < SRR4302534.4717403/94‑1 (MQ=60)
GCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTA < SRR4302534.3875973/94‑1 (MQ=60)
GCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTA < SRR4302534.5153366/94‑1 (MQ=60)
TTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAAT > SRR4302534.6599446/1‑94 (MQ=60)
TTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAAT < SRR4302534.5051006/94‑1 (MQ=60)
TAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATT < SRR4302534.877459/94‑1 (MQ=60)
AGCTCATGAAAGGAGCGCAACAAAATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTA < SRR4302534.1228027/94‑1 (MQ=60)
GCTCATGAAAGGAGCGCAACTAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAA > SRR4302534.6449419/1‑94 (MQ=60)
CTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGGGTTACTTAAT > SRR4302534.3403761/1‑94 (MQ=60)
CATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCA < SRR4302534.5419069/94‑1 (MQ=60)
TGAAAGGATCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACG < SRR4302534.1552408/94‑1 (MQ=60)
TGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACG > SRR4302534.1358598/1‑94 (MQ=60)
TGAAAGGACCGAAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACG < SRR4302534.4479257/94‑1 (MQ=60)
GAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGC < SRR4302534.4868695/94‑1 (MQ=60)
AAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCT > SRR4302534.5381877/1‑94 (MQ=60)
AAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCT > SRR4302534.1705232/1‑94 (MQ=60)
AAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTT > SRR4302534.6549811/1‑94 (MQ=60)
AGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTT < SRR4302534.6261950/94‑1 (MQ=60)
GGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTT < SRR4302534.4580500/94‑1 (MQ=60)
AGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCC > SRR4302534.586852/1‑94 (MQ=60)
CGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAG > SRR4302534.6587537/1‑94 (MQ=60)
CGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAG < SRR4302534.4130862/94‑1 (MQ=60)
GCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGC > SRR4302534.3763146/1‑94 (MQ=60)
AACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAG > SRR4302534.4672091/1‑94 (MQ=60)
AACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAG < SRR4302534.4631473/94‑1 (MQ=60)
AACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAG < SRR4302534.4245573/94‑1 (MQ=60)
ACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGG < SRR4302534.1281225/94‑1 (MQ=60)
CAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGG < SRR4302534.5189397/94‑1 (MQ=60)
CAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGG < SRR4302534.2860951/94‑1 (MQ=60)
AGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTC < SRR4302534.3436016/94‑1 (MQ=60)
AGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTC < SRR4302534.2458703/94‑1 (MQ=60)
AGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTC < SRR4302534.1644465/94‑1 (MQ=60)
TGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGG > SRR4302534.1382686/1‑94 (MQ=60)
GATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGT > SRR4302534.4265736/1‑94 (MQ=60)
GATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGT < SRR4302534.6578402/94‑1 (MQ=60)
TGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAA > SRR4302534.2159697/1‑94 (MQ=60)
TGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAA > SRR4302534.3875438/1‑94 (MQ=60)
TCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCA < SRR4302534.1216154/94‑1 (MQ=60)
CAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAG > SRR4302534.6612083/1‑94 (MQ=60)
CAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAG > SRR4302534.5845337/1‑94 (MQ=60)
AACATATAACACCATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGA > SRR4302534.4034296/1‑94 (MQ=60)
AACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGC > SRR4302534.4138903/1‑94 (MQ=60)
AACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGA > SRR4302534.5409262/1‑94 (MQ=60)
ACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGAC < SRR4302534.3783027/94‑1 (MQ=60)
ACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGAC > SRR4302534.401452/1‑94 (MQ=60)
ATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCA > SRR4302534.3382220/1‑94 (MQ=60)
TATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCAC > SRR4302534.5286163/1‑94 (MQ=60)
TAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCG > SRR4302534.4862974/1‑94 (MQ=60)
TAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCG < SRR4302534.1810522/94‑1 (MQ=60)
TAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCG > SRR4302534.1316892/1‑94 (MQ=60)
AACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGA < SRR4302534.2723581/94‑1 (MQ=60)
AACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGA > SRR4302534.4738288/1‑94 (MQ=60)
ACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGAT > SRR4302534.3167438/1‑94 (MQ=60)
CAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATA > SRR4302534.3873813/1‑94 (MQ=60)
CAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATA > SRR4302534.5079832/1‑94 (MQ=60)
CAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATA < SRR4302534.2761243/94‑1 (MQ=60)
CAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATA > SRR4302534.410946/1‑94 (MQ=60)
AACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAA > SRR4302534.3504056/1‑94 (MQ=60)
AACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAA > SRR4302534.692439/1‑94 (MQ=60)
CATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATG < SRR4302534.6597044/94‑1 (MQ=60)
CATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATG > SRR4302534.206468/1‑94 (MQ=60)
CATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATG < SRR4302534.3161056/94‑1 (MQ=60)
TCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCC > SRR4302534.3797003/1‑94 (MQ=60)
TCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCC < SRR4302534.4838969/94‑1 (MQ=60)
TCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCC < SRR4302534.3121228/94‑1 (MQ=60)
TTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGC < SRR4302534.5495302/94‑1 (MQ=60)
TAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCC < SRR4302534.3405487/94‑1 (MQ=60)
AAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGA > SRR4302534.3217068/1‑94 (MQ=60)
AAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGA > SRR4302534.6343663/1‑94 (MQ=60)
AAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGA > SRR4302534.1700000/1‑94 (MQ=60)
AAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGAC > SRR4302534.4513837/1‑94 (MQ=60)
AAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGAC > SRR4302534.2488761/1‑94 (MQ=60)
AAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACA > SRR4302534.3841470/1‑94 (MQ=60)
AAAGGCCTGACATTACGCCAGGCCCTCTGTGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAA > SRR4302534.6339409/1‑94 (MQ=60)
AAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAA > SRR4302534.3769371/1‑94 (MQ=60)
AAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAA > SRR4302534.1763239/1‑94 (MQ=60)
AAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAA < SRR4302534.3340227/94‑1 (MQ=60)
AAAGGCCTGACATTACGCCACGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAA > SRR4302534.6454359/1‑94 (MQ=60)
AAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAAT > SRR4302534.5829754/1‑94 (MQ=60)
AGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATT > SRR4302534.5361830/1‑94 (MQ=60)
AGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATT > SRR4302534.6283688/1‑94 (MQ=60)
AGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATT < SRR4302534.6198416/94‑1 (MQ=60)
GGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTG > SRR4302534.5043514/1‑94 (MQ=60)
GGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTG > SRR4302534.2656493/1‑94 (MQ=60)
GCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGG > SRR4302534.6170884/1‑94 (MQ=60)
CCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGC > SRR4302534.2020204/1‑94 (MQ=60)
CTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCA > SRR4302534.1392574/1‑94 (MQ=60)
CTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCA > SRR4302534.6589824/1‑94 (MQ=60)
TGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCAC > SRR4302534.4337208/1‑94 (MQ=60)
GACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACC > SRR4302534.5733208/1‑94 (MQ=60)
GACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACC > SRR4302534.6275323/1‑94 (MQ=60)
ACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCA > SRR4302534.1435323/1‑94 (MQ=60)
CATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCAC > SRR4302534.1823853/1‑94 (MQ=60)
ATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACC > SRR4302534.3302489/1‑94 (MQ=60)
ATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGCAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACC < SRR4302534.5387645/94‑1 (MQ=60)
TTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCC < SRR4302534.3899667/94‑1 (MQ=60)
TACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCA > SRR4302534.791367/1‑94 (MQ=60)
ACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAG > SRR4302534.1210103/1‑94 (MQ=60)
ACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAG < SRR4302534.3153793/94‑1 (MQ=60)
CCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAG > SRR4302534.1684400/1‑94 (MQ=60)
CAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGA > SRR4302534.4473150/1‑94 (MQ=60)
AGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAA > SRR4302534.5652445/1‑94 (MQ=60)
AGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCAACACCCAGAAGAA > SRR4302534.1309181/1‑94 (MQ=60)
CCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAACCA < SRR4302534.2184412/94‑1 (MQ=60)
CCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAACCAC > SRR4302534.2661140/1‑94 (MQ=60)
CCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAACCAC > SRR4302534.457438/1‑94 (MQ=60)
CTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAACCACA > SRR4302534.577470/1‑94 (MQ=60)
CTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAACCACA > SRR4302534.567162/1‑94 (MQ=60)
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CAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAACCACA > NC_000913/914471‑914657
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
