Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,061,451 |
A→G |
T144A (ACC→GCC) |
torD → |
TorD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,061,451 | 0 | A | G | 99.6%
| 890.2
/ NA
| 262 | T144A (ACC→GCC) | torD | TorD |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (133/128); minor base T (0/1); total (133/129) |
| Fisher's exact test for biased strand distribution p-value = 4.92e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 270 total aligned reads displayed.
GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGACCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGT > NC_000913/1061361‑1061540
|
aCCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGtt > 2:2650707/1‑93 (MQ=255)
aCCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGtt > 1:5645114/1‑93 (MQ=255)
cAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTcc > 2:922837/1‑93 (MQ=255)
cAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTcc > 2:1793054/1‑93 (MQ=255)
cAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTcc > 2:875010/1‑93 (MQ=255)
aGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCt < 1:2269535/93‑1 (MQ=255)
aGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCt > 2:2449514/1‑93 (MQ=255)
gCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTg > 1:4051765/1‑93 (MQ=255)
ggCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTgcg < 1:3135292/93‑1 (MQ=255)
ggCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTgcg < 1:5128251/93‑1 (MQ=255)
gCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTgcgc < 2:5983432/93‑1 (MQ=255)
aTTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCgaa < 2:2013403/93‑1 (MQ=255)
tgcAACGAACCGGCATATCATCGGGCGATCGATCTCGAATTGCTCAGCCATCTGCATTTTTCGCAGGGAGAGGGGGCCGTTCCTGCGCgaaga < 1:4780935/91‑1 (MQ=255)
cAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAAt < 1:976289/93‑1 (MQ=255)
cAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAAt < 2:723537/93‑1 (MQ=255)
aaCGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATc < 2:3421568/93‑1 (MQ=255)
aCGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCg > 2:2571026/1‑93 (MQ=255)
cGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGa < 2:3319056/93‑1 (MQ=255)
cGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGa < 1:1528930/93‑1 (MQ=255)
gAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGAc < 1:1951670/93‑1 (MQ=255)
aaCCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACa < 1:1287259/93‑1 (MQ=255)
aaCCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACa > 2:4739149/1‑93 (MQ=255)
aCCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAg > 1:1169260/1‑93 (MQ=255)
ccGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGt < 1:3258119/93‑1 (MQ=255)
ccGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGt > 2:4458825/1‑93 (MQ=255)
cGGCAGATCATCTGGGGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGtt < 1:6201555/93‑1 (MQ=255)
cGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGtt < 2:4778798/93‑1 (MQ=255)
cGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGtt < 2:5363522/93‑1 (MQ=255)
ggCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGttt > 1:3362875/1‑93 (MQ=255)
ggCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGttt < 2:1313166/93‑1 (MQ=255)
ggCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGttt < 2:1194834/93‑1 (MQ=255)
gCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTg > 1:6445498/1‑93 (MQ=255)
aGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCg > 2:4618838/1‑93 (MQ=255)
aGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCg < 1:5291733/93‑1 (MQ=255)
gATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCgg < 1:3485295/93‑1 (MQ=255)
gATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCgg > 2:357411/1‑93 (MQ=255)
atcatcTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCCCGAAGAATCGACAGCTTGCGGc > 1:1881661/1‑93 (MQ=255)
tcatcTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCa < 1:4987859/93‑1 (MQ=255)
tcatcTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCa < 1:1638852/93‑1 (MQ=255)
catcTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCaa > 2:5725963/1‑93 (MQ=255)
tcTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGGTTGCGGCaaaa > 1:2941727/1‑93 (MQ=255)
tGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCaaaaaa > 1:5540511/1‑93 (MQ=255)
ggCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAac > 2:1534859/1‑93 (MQ=255)
ccatctatcaCGAATTGCTCAGCCATATGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAacac < 1:4556474/91‑1 (MQ=255)
tctatctCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGCGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGa > 2:3047312/1‑93 (MQ=255)
tctatctCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGa < 2:4215631/93‑1 (MQ=255)
tctatctCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGa > 1:5771460/1‑93 (MQ=255)
tctatctCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGa > 1:2373557/1‑93 (MQ=255)
tctatctCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGa > 2:5918792/1‑93 (MQ=255)
tctatctCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGa < 2:5877846/93‑1 (MQ=255)
ctatctCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGAc < 1:846342/93‑1 (MQ=255)
ctatctCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGAc < 1:4847000/93‑1 (MQ=255)
ctatctCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGAc < 1:2061146/93‑1 (MQ=255)
tctcGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGgc < 1:6001888/93‑1 (MQ=255)
tctcGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGgc > 2:4414032/1‑93 (MQ=255)
tctcGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGgc > 1:4186769/1‑93 (MQ=255)
tcGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGgcgc > 2:2947141/1‑93 (MQ=255)
tcGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGgcgc > 2:4318386/1‑93 (MQ=255)
aaTTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCtgt < 2:3252280/93‑1 (MQ=255)
ttGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTgg > 2:2220764/1‑93 (MQ=255)
tGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGc < 2:5061492/93‑1 (MQ=255)
gCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCa < 1:4502841/93‑1 (MQ=255)
cTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCaa < 1:1101532/93‑1 (MQ=255)
tCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAAt < 2:4922461/93‑1 (MQ=255)
cAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATg < 2:1132138/93‑1 (MQ=255)
cAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATg > 2:3580426/1‑93 (MQ=255)
cAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATg < 1:3278386/93‑1 (MQ=255)
aGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATgg > 1:1756613/1‑93 (MQ=255)
aGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATgg > 2:5489474/1‑93 (MQ=255)
aGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATgg > 1:781595/1‑93 (MQ=255)
gCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGt > 2:5004619/1‑93 (MQ=255)
gCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGt > 2:3955233/1‑93 (MQ=255)
cgaTCTGCATTTTTCGCTGGGAGAGAGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAGAACACTGACGGCGCTGTGGCAATGGtt < 1:1272718/91‑1 (MQ=255)
ccATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGtt > 1:2558166/1‑93 (MQ=255)
ccATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGtt < 1:354443/93‑1 (MQ=255)
ccATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGACAAAAAACACTGACGGCGCTGTGGCAATGGtt < 1:1076747/93‑1 (MQ=255)
cATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTa > 2:4128374/1‑93 (MQ=255)
tCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTAcc > 2:1049719/1‑93 (MQ=255)
tGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCag > 1:5890985/1‑93 (MQ=255)
gCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCaga > 2:605321/1‑93 (MQ=255)
cATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCagag < 1:280227/93‑1 (MQ=255)
aTTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGt < 1:6116735/93‑1 (MQ=255)
tttttCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGtt < 2:1524592/93‑1 (MQ=255)
ttttCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGttt < 1:4911502/93‑1 (MQ=255)
ttCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTttgt < 2:5380715/93‑1 (MQ=255)
tCGCTGGGAGAGGTGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTttgtt < 1:2432683/93‑1 (MQ=255)
gCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTgc > 1:3725025/1‑93 (MQ=255)
cTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTgcg > 1:265430/1‑93 (MQ=255)
gggAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGcgcg > 2:1895712/1‑93 (MQ=255)
ggAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGt > 2:3290122/1‑93 (MQ=255)
ggAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGt < 2:6250696/93‑1 (MQ=255)
ggAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGt < 1:4376965/93‑1 (MQ=255)
gagaGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGtt > 2:6444077/1‑93 (MQ=255)
agagGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTg < 1:3043095/93‑1 (MQ=255)
agagGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTg > 2:2743734/1‑93 (MQ=255)
gagGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTgt < 1:2120076/93‑1 (MQ=255)
gagGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTgt < 2:3747995/93‑1 (MQ=255)
gagGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTgt < 2:6169320/93‑1 (MQ=255)
ggggGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTgtcg > 2:2872884/1‑93 (MQ=255)
ggggCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTgtcgt > 2:4025301/1‑93 (MQ=255)
|
GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGACCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGT > NC_000913/1061361‑1061540
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGACCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGT > NC_000913/1061358‑1061544
|
ATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGG < SRR4302534.5874296/94‑1 (MQ=60)
ATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGG > SRR4302534.2632259/1‑94 (MQ=60)
GGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCC < SRR4302534.5179821/94‑1 (MQ=60)
GGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCC < SRR4302534.5046405/94‑1 (MQ=60)
AACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTT > SRR4302534.5797917/1‑94 (MQ=60)
AACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTT > SRR4302534.162179/1‑94 (MQ=60)
AACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTC > SRR4302534.1020971/1‑94 (MQ=60)
AACCAGCGCCAATTGCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTT < SRR4302534.908836/94‑1 (MQ=60)
ACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTC > SRR4302534.5402359/1‑94 (MQ=60)
ACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTC > SRR4302534.3986985/1‑94 (MQ=60)
CAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCT < SRR4302534.5887237/94‑1 (MQ=60)
CAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCT < SRR4302534.2003209/94‑1 (MQ=60)
CAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCT < SRR4302534.11658/94‑1 (MQ=60)
AGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTG < SRR4302534.2329714/94‑1 (MQ=60)
AGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTG > SRR4302534.2988127/1‑94 (MQ=60)
AGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTG > SRR4302534.3096578/1‑94 (MQ=60)
AGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTG > SRR4302534.4160443/1‑94 (MQ=60)
CGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCG > SRR4302534.4744580/1‑94 (MQ=60)
CGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCG < SRR4302534.2033396/94‑1 (MQ=60)
CGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCG < SRR4302534.519109/94‑1 (MQ=60)
GGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGC < SRR4302534.5266704/94‑1 (MQ=60)
GGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGC < SRR4302534.3217741/94‑1 (MQ=60)
GCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCG > SRR4302534.4798678/1‑94 (MQ=60)
GCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCG > SRR4302534.6430591/1‑94 (MQ=60)
ATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAG < SRR4302534.4913435/94‑1 (MQ=60)
ATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAG < SRR4302534.4489071/94‑1 (MQ=60)
ATATCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAG < SRR4302534.2116786/94‑1 (MQ=60)
TGCAACGAACCGGCATATCATCGGGCGATCGATCTCGAATTGCTCAGCCATCTGCATTTTTCGCAGGGAGAGGGGGCCGTTCCTGCGCGAAGAA < SRR4302534.4910749/94‑1 (MQ=60)
GAACGAACCGGCAGATCATCTGGCCATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATC < SRR4302534.774198/94‑1 (MQ=60)
CAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATC > SRR4302534.848292/1‑94 (MQ=60)
CAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATC > SRR4302534.2372509/1‑94 (MQ=60)
CAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATC < SRR4302534.1001205/94‑1 (MQ=60)
TACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTTTTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGGGTGAAGGATCG > SRR4302534.3345861/1‑94 (MQ=60)
AACGACCCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCG < SRR4302534.2476367/94‑1 (MQ=60)
AACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCG < SRR4302534.5438325/94‑1 (MQ=60)
CGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGAC > SRR4302534.3628872/1‑94 (MQ=60)
CGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGAC < SRR4302534.3672790/94‑1 (MQ=60)
CGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGAC < SRR4302534.1569050/94‑1 (MQ=60)
GAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACA < SRR4302534.2002746/94‑1 (MQ=60)
GAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACA < SRR4302534.1636167/94‑1 (MQ=60)
GAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACA > SRR4302534.2669139/1‑94 (MQ=60)
GAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGACGGGGCCGTTCCTGCGCGAAGAATCGACA > SRR4302534.5126579/1‑94 (MQ=60)
AACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAG > SRR4302534.1199970/1‑94 (MQ=60)
AACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAG < SRR4302534.1321160/94‑1 (MQ=60)
ACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGT > SRR4302534.5696990/1‑94 (MQ=60)
CCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTT < SRR4302534.3344886/94‑1 (MQ=60)
CCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTT < SRR4302534.196827/94‑1 (MQ=60)
CCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTT > SRR4302534.3449158/1‑94 (MQ=60)
CGGCAGATCATCTGGGGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTT < SRR4302534.6370220/94‑1 (MQ=60)
CGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTT < SRR4302534.3419391/94‑1 (MQ=60)
CGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTT > SRR4302534.3452942/1‑94 (MQ=60)
GGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTG > SRR4302534.6619202/1‑94 (MQ=60)
GCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGC < SRR4302534.416740/94‑1 (MQ=60)
AGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGG < SRR4302534.5434546/94‑1 (MQ=60)
AGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGG > SRR4302534.3363138/1‑94 (MQ=60)
AGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGG > SRR4302534.696767/1‑94 (MQ=60)
GATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGC < SRR4302534.3578981/94‑1 (MQ=60)
GATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGC > SRR4302534.5067251/1‑94 (MQ=60)
GATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCCCGAAGAATCGACAGCTTGCGGC > SRR4302534.1930684/1‑94 (MQ=60)
GATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTAGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGAGAGTTTGCtgt > SRR4302534.3434581/1‑91 (MQ=60)
TCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAA < SRR4302534.5122810/94‑1 (MQ=60)
TCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAA < SRR4302534.1681594/94‑1 (MQ=60)
TCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGCGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGGAA > SRR4302534.6102487/1‑94 (MQ=60)
ATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGGTTGCGGCAAAA > SRR4302534.3018918/1‑94 (MQ=60)
CTGGCGATCTATCTCGCATTGCTGAGCCATCTGCATTTTTCGCTGGGAGAGGGGGACGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAACAAA > SRR4302534.2955133/1‑94 (MQ=60)
CTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAA > SRR4302534.5690069/1‑94 (MQ=60)
TGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAAC > SRR4302534.1124483/1‑94 (MQ=60)
TGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAAC > SRR4302534.1305343/1‑94 (MQ=60)
GGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACA < SRR4302534.2783971/94‑1 (MQ=60)
CGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACT < SRR4302534.5047382/94‑1 (MQ=60)
CGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACT > SRR4302534.2293219/1‑94 (MQ=60)
CCATCTATCACGAATTGCTCAGCCATATGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACT < SRR4302534.4680008/94‑1 (MQ=60)
GATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTG > SRR4302534.4588809/1‑94 (MQ=60)
ATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGA > SRR4302534.5928031/1‑94 (MQ=60)
ATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGA > SRR4302534.2436588/1‑94 (MQ=60)
TCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGAC < SRR4302534.193410/94‑1 (MQ=60)
TCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGAC < SRR4302534.3639756/94‑1 (MQ=60)
TCTATCTCGAATTCCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGAC < SRR4302534.2305221/94‑1 (MQ=60)
CTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACG < SRR4302534.2115043/94‑1 (MQ=60)
CTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACG < SRR4302534.4978504/94‑1 (MQ=60)
CTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACG < SRR4302534.867672/94‑1 (MQ=60)
TATCTCGAATTGCTCATCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGG > SRR4302534.455443/1‑94 (MQ=60)
ATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGC > SRR4302534.4299913/1‑94 (MQ=60)
TCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCG < SRR4302534.6164931/94‑1 (MQ=60)
GAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCCAAAAACACTGAAAGCGCTGT > SRR4302534.3477321/1‑94 (MQ=60)
AATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTG > SRR4302534.6542056/1‑94 (MQ=60)
AATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTG < SRR4302534.4975231/94‑1 (MQ=60)
TTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGC < SRR4302534.1257069/94‑1 (MQ=60)
TGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCA > SRR4302534.4648986/1‑94 (MQ=60)
GCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAA < SRR4302534.4624715/94‑1 (MQ=60)
GCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAA > SRR4302534.6164983/1‑94 (MQ=60)
CTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAAT > SRR4302534.1146346/1‑94 (MQ=60)
CTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAAT < SRR4302534.1130238/94‑1 (MQ=60)
CTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAAT > SRR4302534.1874549/1‑94 (MQ=60)
TCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATG < SRR4302534.5710278/94‑1 (MQ=60)
TCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATG < SRR4302534.3058519/94‑1 (MQ=60)
TCAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATG < SRR4302534.4198828/94‑1 (MQ=60)
CAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGG > SRR4302534.1802219/1‑94 (MQ=60)
CAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGG < SRR4302534.3365755/94‑1 (MQ=60)
CAGCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGG > SRR4302534.801088/1‑94 (MQ=60)
GCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTT < SRR4302534.2694803/94‑1 (MQ=60)
GCCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTT > SRR4302534.2625972/1‑94 (MQ=60)
CGATCTGCATTTTTCGCTGGGAGAGAGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAGAACACTGACGGCGCTGTGGCAATGGTTA < SRR4302534.1306223/94‑1 (MQ=60)
CCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTA < SRR4302534.2512938/94‑1 (MQ=60)
CCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTA < SRR4302534.363513/94‑1 (MQ=60)
CCATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGACAAAAAACACTGACGGCGCTGTGGCAATGGTTA < SRR4302534.1104716/94‑1 (MQ=60)
CATCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTAC > SRR4302534.1315865/1‑94 (MQ=60)
TCTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCA > SRR4302534.2371224/1‑94 (MQ=60)
CTGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAG > SRR4302534.6050939/1‑94 (MQ=60)
TGCATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGA < SRR4302534.5681044/94‑1 (MQ=60)
CATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGT < SRR4302534.287471/94‑1 (MQ=60)
ATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTT < SRR4302534.3278066/94‑1 (MQ=60)
ATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTT < SRR4302534.6283128/94‑1 (MQ=60)
ATTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTT < SRR4302534.6227350/94‑1 (MQ=60)
TTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTT < SRR4302534.2548024/94‑1 (MQ=60)
TTTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTT < SRR4302534.5988601/94‑1 (MQ=60)
TTTTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTG < SRR4302534.5044612/94‑1 (MQ=60)
TTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTT < SRR4302534.6353359/94‑1 (MQ=60)
TTCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTT < SRR4302534.612428/94‑1 (MQ=60)
TCGCTGGGAGAGGTGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTG < SRR4302534.2497356/94‑1 (MQ=60)
TCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTG < SRR4302534.867889/94‑1 (MQ=60)
TCGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTG > SRR4302534.5021434/1‑94 (MQ=60)
gcCTGGGAGAGGGGACTGTTCCTGCGCGAAGAATCGACAGTTTGCGCCAAAAATCACGGACTGCGCTGTGTCAATGGTTTCCAGAGTTTGTTGA < SRR4302534.1330765/92‑1 (MQ=60)
CGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGC > SRR4302534.5918082/1‑94 (MQ=60)
CGCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGC > SRR4302534.3825149/1‑94 (MQ=60)
GCTGGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCG > SRR4302534.272317/1‑94 (MQ=60)
GGGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGT < SRR4302534.1435879/94‑1 (MQ=60)
GGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTT > SRR4302534.1785864/1‑94 (MQ=60)
GGAGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTT < SRR4302534.4494940/94‑1 (MQ=60)
AGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGT < SRR4302534.3122911/94‑1 (MQ=60)
AGAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGT > SRR4302534.2910617/1‑94 (MQ=60)
GAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTC > SRR4302534.3132460/1‑94 (MQ=60)
GAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTC > SRR4302534.3184385/1‑94 (MQ=60)
GAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTC > SRR4302534.1406404/1‑94 (MQ=60)
GAGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTC < SRR4302534.2175882/94‑1 (MQ=60)
TGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCG > SRR4302534.3748481/1‑94 (MQ=60)
AGGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCG > SRR4302534.1817983/1‑94 (MQ=60)
GGGGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGT < SRR4302534.4373462/94‑1 (MQ=60)
GGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCA > SRR4302534.4580723/1‑94 (MQ=60)
GGGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCA > SRR4302534.874438/1‑94 (MQ=60)
GGCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAG < SRR4302534.5499689/94‑1 (MQ=60)
GCCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGT < SRR4302534.1044167/94‑1 (MQ=60)
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ATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGACCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGT > NC_000913/1061358‑1061544
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
