Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,158,718 |
T→C |
Q686R (CAG→CGG) |
fhuE ← |
outer membrane receptor for ferric iron uptake |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,158,718 | 0 | T | C | 100.0%
| 655.7
/ NA
| 187 | Q686R (CAG→CGG) | fhuE | outer membrane receptor for ferric iron uptake |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (92/95); total (92/95) |
Only 100 of 194 total aligned reads displayed.
CCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCTGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACGCGA > NC_000913/1158628‑1158807
|
cGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGt > 1:1339070/1‑93 (MQ=255)
cGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGt > 2:537950/1‑93 (MQ=255)
tAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAg < 1:4918055/93‑1 (MQ=255)
tAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAg > 1:6109714/1‑93 (MQ=255)
gACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCg > 2:6205684/1‑93 (MQ=255)
gACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCg > 2:4686277/1‑93 (MQ=255)
gACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCg > 1:5951938/1‑93 (MQ=255)
aCGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCgg < 1:195873/93‑1 (MQ=255)
cGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCggg < 1:5153692/93‑1 (MQ=255)
cGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCCGTAACCAGAAGTTTTTCTTCACCCCGTCGCggg > 1:4108390/1‑93 (MQ=255)
aTAGACCCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTg < 1:731277/93‑1 (MQ=255)
aTAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTg < 2:3687304/93‑1 (MQ=255)
aTAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTg > 1:5683811/1‑93 (MQ=255)
tAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCAAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGa < 1:4491635/93‑1 (MQ=255)
aGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGaa < 1:1243176/93‑1 (MQ=255)
gAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAag > 2:3439311/1‑93 (MQ=255)
aaCCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAaga < 2:2048317/93‑1 (MQ=255)
aaCCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAaga < 1:5829159/93‑1 (MQ=255)
aaCCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAaga > 1:555210/1‑93 (MQ=255)
aaCCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCCGGTGAaga < 1:6323943/93‑1 (MQ=255)
ccTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAgaga < 2:3961484/93‑1 (MQ=255)
ccTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAgaga < 1:5091650/93‑1 (MQ=255)
cTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGAt < 2:873879/93‑1 (MQ=255)
ttCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATc > 2:6341641/1‑93 (MQ=255)
ttCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATc < 1:623851/93‑1 (MQ=255)
tCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATcc < 2:3912770/93‑1 (MQ=255)
cACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATccac > 1:561160/1‑93 (MQ=255)
aCGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATccacc < 1:4317994/93‑1 (MQ=255)
aCGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATccacc > 1:5749708/1‑93 (MQ=255)
aCGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATccacc > 2:3233028/1‑93 (MQ=255)
gTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAg > 1:959663/1‑93 (MQ=255)
gTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAg < 2:3047137/93‑1 (MQ=255)
ttGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAgc < 2:1939377/93‑1 (MQ=255)
ttGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAgc < 1:2698155/93‑1 (MQ=255)
tGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAgcg < 2:729064/93‑1 (MQ=255)
tGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAgcg > 1:659183/1‑93 (MQ=255)
ggTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAgcgc < 1:775789/93‑1 (MQ=255)
aTCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTa > 2:4085158/1‑93 (MQ=255)
tCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAg > 2:1140772/1‑93 (MQ=255)
tCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAg < 2:1541891/93‑1 (MQ=255)
gTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCt > 1:2293785/1‑93 (MQ=255)
tAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTa > 1:1681540/1‑93 (MQ=255)
aGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTAc < 1:3426550/93‑1 (MQ=255)
ggTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTAcc > 1:5477592/1‑93 (MQ=255)
ggTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTAcc < 2:2265121/93‑1 (MQ=255)
tGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCt < 1:5413830/93‑1 (MQ=255)
gTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTc < 2:5974452/93‑1 (MQ=255)
tCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCg < 2:3383309/93‑1 (MQ=255)
cGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCgg < 2:1505951/93‑1 (MQ=255)
gAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGgc < 1:3472421/93‑1 (MQ=255)
gAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGgc > 2:2171391/1‑93 (MQ=255)
gAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGgc > 2:4710379/1‑93 (MQ=255)
gAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGgc < 1:3729446/93‑1 (MQ=255)
gAACAGGTAATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGTGTAGCTACCTTGCTCGgc < 1:1941701/93‑1 (MQ=255)
aaCAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGgcg > 2:2430679/1‑93 (MQ=255)
aCAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGgcgc < 2:608784/93‑1 (MQ=255)
aCAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGgcgc < 2:3291942/93‑1 (MQ=255)
aCAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGgcgc > 1:3972366/1‑93 (MQ=255)
aCAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGgcgc > 2:1251655/1‑93 (MQ=255)
aCAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGgcgc > 1:4692044/1‑93 (MQ=255)
aCAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGgcgc > 1:2484939/1‑93 (MQ=255)
cAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGcgcg > 2:2588360/1‑93 (MQ=255)
aGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCgg > 2:6449199/1‑93 (MQ=255)
aGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCgg < 1:5026540/93‑1 (MQ=255)
ggTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGa > 2:580971/1‑93 (MQ=255)
gTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGaa < 2:4269136/93‑1 (MQ=255)
aTTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAggg > 2:1910156/1‑92 (MQ=255)
tGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGc < 1:304061/93‑1 (MQ=255)
aCGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCa > 1:1896071/1‑93 (MQ=255)
cGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCAt < 1:2960576/93‑1 (MQ=255)
ttCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGAGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATAc > 2:3511187/1‑93 (MQ=255)
tCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACg < 1:5456231/93‑1 (MQ=255)
ccccTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACgg < 1:6226311/93‑1 (MQ=255)
ccccTGTAACAAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACgg < 1:3345300/93‑1 (MQ=255)
ccTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCCTACGGCg > 1:1137927/1‑93 (MQ=255)
ccTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCg < 1:2631066/93‑1 (MQ=255)
tGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTc > 1:3845354/1‑93 (MQ=255)
tGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTc < 1:5114411/93‑1 (MQ=255)
tAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCAc < 1:855963/93‑1 (MQ=255)
aaCGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACg > 2:1945492/1‑93 (MQ=255)
aaCGAGAAGATTTTCGTCACCCGGTAGCGGGCGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTAACg > 1:1628075/1‑93 (MQ=255)
aCGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACgg < 2:6365198/93‑1 (MQ=255)
aCGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACgg < 2:5916716/93‑1 (MQ=255)
aCGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACgg > 2:5599194/1‑93 (MQ=255)
cGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGgt < 1:3062296/93‑1 (MQ=255)
cGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGgt < 1:3576408/93‑1 (MQ=255)
gagaAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGgtg < 1:2783337/93‑1 (MQ=255)
gagaAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGgtg < 1:1180375/93‑1 (MQ=255)
gagaAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGgtg > 1:2241893/1‑93 (MQ=255)
gaAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTc < 2:3008076/93‑1 (MQ=255)
aaGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCg < 2:461319/93‑1 (MQ=255)
aaGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCg > 1:4654848/1‑93 (MQ=255)
aGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCgg < 1:498803/93‑1 (MQ=255)
aGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCgg < 1:5880106/93‑1 (MQ=255)
tttttCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCGCGGTGTCGGta < 1:5312368/93‑1 (MQ=255)
ttCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATac < 2:1023492/93‑1 (MQ=255)
cGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATacac < 2:5061337/93‑1 (MQ=255)
cGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATacac < 2:5441405/93‑1 (MQ=255)
cACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACAcgcg > 2:3724681/1‑93 (MQ=255)
aCCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACGCGa < 2:1093350/93‑1 (MQ=255)
|
CCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCTGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACGCGA > NC_000913/1158628‑1158807
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCTGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACGCGATTT > NC_000913/1158625‑1158810
|
GTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCC > SRR4302534.6104054/1‑94 (MQ=60)
GTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCC > SRR4302534.3104194/1‑94 (MQ=60)
TGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCG < SRR4302534.628741/94‑1 (MQ=60)
TGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCG > SRR4302534.6457287/1‑94 (MQ=60)
TGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCG > SRR4302534.2639696/1‑94 (MQ=60)
TGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTAGTCACCCG > SRR4302534.56309/1‑94 (MQ=60)
TGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGATTTGTCGAACAGGCTATTGACGTTCACCTGTAACGAGGAGGTTTTCGTCACCCG > SRR4302534.6457286/1‑94 (MQ=60)
GCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGG < SRR4302534.3240148/94‑1 (MQ=60)
GCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGG < SRR4302534.2057926/94‑1 (MQ=60)
GCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGG > SRR4302534.1965268/1‑94 (MQ=60)
CCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGT > SRR4302534.1374368/1‑94 (MQ=60)
CGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTA < SRR4302534.5368084/94‑1 (MQ=60)
GTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAG < SRR4302534.5740655/94‑1 (MQ=60)
GTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAG > SRR4302534.6275877/1‑94 (MQ=60)
GTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAG > SRR4302534.2996088/1‑94 (MQ=60)
TAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGC > SRR4302534.3041917/1‑94 (MQ=60)
TAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGC < SRR4302534.5648153/94‑1 (MQ=60)
TAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGC < SRR4302534.5051346/94‑1 (MQ=60)
AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGCACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCG > SRR4302534.6329173/1‑94 (MQ=60)
AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCG > SRR4302534.5776128/1‑94 (MQ=60)
AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCG > SRR4302534.6113551/1‑94 (MQ=60)
ACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGG < SRR4302534.201006/94‑1 (MQ=60)
CGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGT < SRR4302534.5292704/94‑1 (MQ=60)
GATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTG > SRR4302534.5837733/1‑94 (MQ=60)
GATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTG < SRR4302534.3812334/94‑1 (MQ=60)
ATAGACCCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGA < SRR4302534.749344/94‑1 (MQ=60)
TAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAA < SRR4302534.2570069/94‑1 (MQ=60)
TAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCAAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAA < SRR4302534.4613172/94‑1 (MQ=60)
AGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAG < SRR4302534.1275941/94‑1 (MQ=60)
AGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAG > SRR4302534.5589602/1‑94 (MQ=60)
GAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGA < SRR4302534.2451227/94‑1 (MQ=60)
GAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGA > SRR4302534.568895/1‑94 (MQ=60)
AACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAG < SRR4302534.5987386/94‑1 (MQ=60)
AACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCCGGTGAAGAG < SRR4302534.6494804/94‑1 (MQ=60)
CCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGAT > SRR4302534.4812971/1‑94 (MQ=60)
CCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGAT < SRR4302534.5229080/94‑1 (MQ=60)
CTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATC > SRR4302534.50950/1‑94 (MQ=60)
TTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCC < SRR4302534.638989/94‑1 (MQ=60)
CCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCAC > SRR4302534.574967/1‑94 (MQ=60)
CACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACC > SRR4302534.5905616/1‑94 (MQ=60)
ACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCA < SRR4302534.4434903/94‑1 (MQ=60)
CGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAG > SRR4302534.984112/1‑94 (MQ=60)
CGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAG < SRR4302534.1687124/94‑1 (MQ=60)
TTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCG < SRR4302534.2769433/94‑1 (MQ=60)
TTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCG > SRR4302534.675210/1‑94 (MQ=60)
GGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCG < SRR4302534.795117/94‑1 (MQ=60)
CGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCT < SRR4302534.5260853/94‑1 (MQ=60)
CGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCT > SRR4302534.2354667/1‑94 (MQ=60)
GTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTA > SRR4302534.5849189/1‑94 (MQ=60)
GTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTA > SRR4302534.6051098/1‑94 (MQ=60)
GTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTA > SRR4302534.1725281/1‑94 (MQ=60)
GTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTA > SRR4302534.2008171/1‑94 (MQ=60)
TAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTAC > SRR4302534.560634/1‑94 (MQ=60)
AGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACC > SRR4302534.5625288/1‑94 (MQ=60)
AGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACC < SRR4302534.3518609/94‑1 (MQ=60)
GTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTT < SRR4302534.927718/94‑1 (MQ=60)
TGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTC > SRR4302534.3484925/1‑94 (MQ=60)
TGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTC < SRR4302534.5559452/94‑1 (MQ=60)
TGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTC > SRR4302534.3646236/1‑94 (MQ=60)
TGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTC < SRR4302534.68478/94‑1 (MQ=60)
CGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGC < SRR4302534.467752/94‑1 (MQ=60)
GAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCG < SRR4302534.3829662/94‑1 (MQ=60)
GAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCG < SRR4302534.3565757/94‑1 (MQ=60)
GAACAGGTAATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGTGTAGCTACCTTGCTCGGCG < SRR4302534.1992479/94‑1 (MQ=60)
AACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGC > SRR4302534.4078698/1‑94 (MQ=60)
AACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGC > SRR4302534.4819405/1‑94 (MQ=60)
AACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGC > SRR4302534.2550951/1‑94 (MQ=60)
CAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGG < SRR4302534.5960804/94‑1 (MQ=60)
CAGGTGATTGACGTTCCCCTGTAACGAGAACTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGG < SRR4302534.1320041/94‑1 (MQ=60)
AGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGA < SRR4302534.5162308/94‑1 (MQ=60)
GGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAA < SRR4302534.5492764/94‑1 (MQ=60)
GTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAG < SRR4302534.2804730/94‑1 (MQ=60)
TATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGG > SRR4302534.1613769/1‑94 (MQ=60)
ATTGTCGTTCCCCTGTAACGAGAAGTTTTTCGGCATCCTGTAGCTGGTGTTGCGATCCATCAGCGCGTAGCTACCTTGCTCcgcctggaaggcc > SRR4302534.1093876/1‑81 (MQ=20)
TTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGC < SRR4302534.4395899/94‑1 (MQ=60)
TGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCC < SRR4302534.311902/94‑1 (MQ=60)
TGACGTGCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCC < SRR4302534.3882325/94‑1 (MQ=60)
GACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCA > SRR4302534.1945522/1‑94 (MQ=60)
ACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCAT < SRR4302534.6256777/94‑1 (MQ=60)
CGTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATA < SRR4302534.3038139/94‑1 (MQ=60)
GTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGCAGGTGCCATAC > SRR4302534.519422/1‑94 (MQ=60)
GTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATAC > SRR4302534.2280164/1‑94 (MQ=60)
GTTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATAC < SRR4302534.760062/94‑1 (MQ=60)
TTCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACG < SRR4302534.5042296/94‑1 (MQ=60)
TCCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGG < SRR4302534.5603260/94‑1 (MQ=60)
CCCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGC < SRR4302534.6395354/94‑1 (MQ=60)
CCCCTGTAACAAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGC < SRR4302534.3434850/94‑1 (MQ=60)
CCCTGTAACGAGAATTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGACATACGGCG < SRR4302534.6442775/94‑1 (MQ=60)
CCCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCCTACGGCG > SRR4302534.1167688/1‑94 (MQ=60)
CCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGT < SRR4302534.2700679/94‑1 (MQ=60)
CCTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGT > SRR4302534.6030748/1‑94 (MQ=60)
CTGTAACGAGAAGTTTTTCGTCACCCGGTATTGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTC > SRR4302534.5461932/1‑94 (MQ=60)
CTGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTC > SRR4302534.3948625/1‑94 (MQ=60)
TGTAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCA < SRR4302534.5252435/94‑1 (MQ=60)
TAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACG > SRR4302534.863115/1‑94 (MQ=60)
TAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACG < SRR4302534.6401039/94‑1 (MQ=60)
TAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACG < SRR4302534.877564/94‑1 (MQ=60)
TAACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACG < SRR4302534.3968872/94‑1 (MQ=60)
TAACGAGAAGATTTTCGTCACCCGGTAGCGGGCGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTAACG > SRR4302534.1670544/1‑94 (MQ=60)
ACGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGT > SRR4302534.985320/1‑94 (MQ=60)
CGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTG > SRR4302534.2301303/1‑94 (MQ=60)
CGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTG < SRR4302534.3142665/94‑1 (MQ=60)
CGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTG < SRR4302534.3672603/94‑1 (MQ=60)
AGAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTG < SRR4302534.4532552/94‑1 (MQ=60)
GAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGT > SRR4302534.3292440/1‑94 (MQ=60)
GAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGT < SRR4302534.2856549/94‑1 (MQ=60)
GAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGT < SRR4302534.1211405/94‑1 (MQ=60)
GAGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGT > SRR4302534.2348999/1‑94 (MQ=60)
AGAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTC < SRR4302534.3545947/94‑1 (MQ=60)
GAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCG < SRR4302534.1239826/94‑1 (MQ=60)
GAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCG > SRR4302534.4781216/1‑94 (MQ=60)
GAAGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCG < SRR4302534.2719854/94‑1 (MQ=60)
AGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGT < SRR4302534.6039758/94‑1 (MQ=60)
AGTTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGT < SRR4302534.511231/94‑1 (MQ=60)
TTTTTCGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCGCGGTGTCGGTAT < SRR4302534.5455693/94‑1 (MQ=60)
CGTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACG > SRR4302534.5125611/1‑94 (MQ=60)
GTCACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACGC > SRR4302534.1747938/1‑94 (MQ=60)
CACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACGCGA > SRR4302534.4120233/1‑94 (MQ=60)
ACCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTCTACACGCGCT > SRR4302534.3042979/1‑94 (MQ=60)
CCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACGCGATT < SRR4302534.2476087/94‑1 (MQ=60)
CCCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACGCGATT > SRR4302534.5828478/1‑94 (MQ=60)
CCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACGCGATTT < SRR4302534.1562704/94‑1 (MQ=60)
CCGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACGCGATTT > SRR4302534.2723786/1‑94 (MQ=60)
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GTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTCGTCACCTGGTAGCGGGTGAAGAGATCCACCAGCGCGTAGCTACCTTGCTCGGCGCGGAAGGTGCCATACGGCGTCACGGTGTCGGTATACACGCGATTT > NC_000913/1158625‑1158810
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
