Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,279,054 |
A→G |
intergenic (+483/‑33) |
narK → / → narG |
nitrite extrusion protein/nitrate reductase 1 alpha subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,279,054 | 0 | A | G | 99.4%
| 549.5
/ NA
| 159 | intergenic (+483/‑33) | narK/narG | nitrite extrusion protein/nitrate reductase 1 alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (83/75); minor base C (1/0); total (84/75) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 167 total aligned reads displayed.
TTTCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCAGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGCC > NC_000913/1278965‑1279143
|
tttCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGTGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCggag < 2:3446501/93‑1 (MQ=255)
tttCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCggag > 1:3690728/1‑93 (MQ=255)
tttCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCggag > 1:2975897/1‑93 (MQ=255)
tttCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCggag < 2:4501985/93‑1 (MQ=255)
tttCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCggag > 2:4540850/1‑93 (MQ=255)
ttCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAgg > 2:4351086/1‑93 (MQ=255)
cATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGc < 2:1138567/93‑1 (MQ=255)
cATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGc > 2:4885108/1‑93 (MQ=255)
cATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCCGAGGGc > 2:4920179/1‑93 (MQ=255)
cATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCACTTAAACATTAGCAATGTCGATTTATCGGAggtc < 1:6150367/93‑3 (MQ=255)
aTCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGcc > 2:5976802/1‑93 (MQ=255)
tCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCg > 2:5932398/1‑93 (MQ=255)
tCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCg > 2:5830185/1‑93 (MQ=255)
tCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCg < 2:4061429/93‑1 (MQ=255)
tCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCg > 2:6366556/1‑93 (MQ=255)
tCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCg > 2:1145124/1‑93 (MQ=255)
cccATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGAc < 1:4407951/93‑1 (MQ=255)
cccATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGAc > 1:2155143/1‑93 (MQ=255)
cccATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGAc > 2:780901/1‑93 (MQ=255)
ccATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACa > 2:1542076/1‑93 (MQ=255)
cACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCt > 2:2879920/1‑93 (MQ=255)
cACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCt < 1:924483/93‑1 (MQ=255)
cACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGACCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCt > 2:6233473/1‑93 (MQ=255)
ctctTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTcc > 1:455250/1‑93 (MQ=255)
tctTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTccc > 2:1360010/1‑93 (MQ=255)
tGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCcaca < 1:2698512/93‑1 (MQ=255)
tGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCcaca < 1:5006967/93‑1 (MQ=255)
tGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCcaca < 1:6441987/93‑1 (MQ=255)
tGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCcaca > 1:3690504/1‑93 (MQ=255)
gATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAg > 1:4206834/1‑93 (MQ=255)
aTCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAgg > 2:675389/1‑93 (MQ=255)
tCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGga < 2:2550791/93‑1 (MQ=255)
tCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGga > 2:5067328/1‑93 (MQ=255)
gTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGgaga > 1:257650/1‑93 (MQ=255)
ttATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGaa < 1:4431156/93‑1 (MQ=255)
ttATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGaa > 1:2866714/1‑93 (MQ=255)
ttATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGaa > 1:5408854/1‑93 (MQ=255)
tATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGaaa > 1:1349551/1‑93 (MQ=255)
aTCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGaaaa < 2:196719/93‑1 (MQ=255)
aTCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGaaaa > 1:6046883/1‑93 (MQ=255)
ttCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGAt < 2:311932/93‑1 (MQ=255)
ccACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAg < 2:5840934/93‑1 (MQ=255)
ccACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAg > 2:3048286/1‑93 (MQ=255)
aCGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTa > 2:4650895/1‑93 (MQ=255)
aCGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTa < 1:5364477/93‑1 (MQ=255)
tGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAAtt > 1:6171701/1‑93 (MQ=255)
gTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTc > 2:2669273/1‑93 (MQ=255)
cAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTgg > 2:5091187/1‑93 (MQ=255)
agagCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGa > 1:442340/1‑93 (MQ=255)
agagCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGa < 2:4204909/93‑1 (MQ=255)
gCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCg > 2:5028768/1‑93 (MQ=255)
gCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCg > 1:4816113/1‑93 (MQ=255)
gTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGt < 2:4453721/93‑1 (MQ=255)
ttACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGtt > 2:5336219/1‑93 (MQ=255)
tACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGttt > 1:356195/1‑93 (MQ=255)
tACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGgtt > 1:6470236/1‑93 (MQ=255)
aCCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTc < 2:2996071/93‑1 (MQ=255)
aCCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTc < 1:3515679/93‑1 (MQ=255)
ccTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCg > 2:1602526/1‑93 (MQ=255)
cTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGc > 2:1703960/1‑93 (MQ=255)
cTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGc < 1:1586777/93‑1 (MQ=255)
cTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGc < 1:1684619/93‑1 (MQ=255)
ttGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCt < 1:5713529/93‑1 (MQ=255)
ttGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCt > 2:391548/1‑93 (MQ=255)
ttGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCt < 1:2455353/93‑1 (MQ=255)
ccTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACtt < 2:5745002/93‑1 (MQ=255)
ccTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACtt < 1:5427843/93‑1 (MQ=255)
cTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTc > 2:5710524/1‑93 (MQ=255)
cTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTc < 2:3223671/93‑1 (MQ=255)
ttAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCa > 1:2021603/1‑93 (MQ=255)
aaaCATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCaaa < 1:5769473/93‑1 (MQ=255)
aaCATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAAc > 2:2342428/1‑93 (MQ=255)
aCATTAGGAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACa > 1:6360133/1‑93 (MQ=255)
aCATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACa > 2:385995/1‑93 (MQ=255)
aTTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGa > 2:2423060/1‑93 (MQ=255)
aTTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGa > 1:3850472/1‑93 (MQ=255)
aTTAGCAATGTCGATTTACCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGa < 2:4764559/93‑1 (MQ=255)
ttAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGaa > 1:2570026/1‑93 (MQ=255)
tAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAg < 1:5582166/93‑1 (MQ=255)
aGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAgg < 1:4905472/93‑1 (MQ=255)
aGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAgg < 1:2043648/93‑1 (MQ=255)
gCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAggg < 2:1808583/93‑1 (MQ=255)
gCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAggg > 2:3640685/1‑93 (MQ=255)
cAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGt < 2:3021616/93‑1 (MQ=255)
cAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGt < 2:3345646/93‑1 (MQ=255)
aaTGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTg > 2:2679766/1‑93 (MQ=255)
tGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGaa < 2:6471279/93‑1 (MQ=255)
gTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGaaa < 1:3627653/93‑1 (MQ=255)
gTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGaaa > 2:1857037/1‑93 (MQ=255)
cGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAAcc < 1:4041951/93‑1 (MQ=255)
cGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAAcc < 2:5604595/93‑1 (MQ=255)
cGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAAcc > 1:24014/1‑93 (MQ=255)
gATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCt > 1:2355484/1‑93 (MQ=255)
gATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCt < 1:5239554/93‑1 (MQ=255)
aTTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCtt < 1:1588069/93‑1 (MQ=255)
ttATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTg < 1:3330899/93‑1 (MQ=255)
ttATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTg < 1:1196870/93‑1 (MQ=255)
tATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGc > 2:3100764/1‑93 (MQ=255)
tATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGc > 1:1047264/1‑93 (MQ=255)
aTCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGcc < 1:5309256/93‑1 (MQ=255)
|
TTTCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCAGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGCC > NC_000913/1278965‑1279143
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TATTTTTCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCAGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGCCGATG > NC_000913/1278961‑1279147
|
TATTTTTCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCG < SRR4302534.3052373/94‑1 (MQ=60)
TTTTCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAG > SRR4302534.3789966/1‑94 (MQ=60)
TTTTCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAG > SRR4302534.3053796/1‑94 (MQ=60)
TTTCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGG < SRR4302534.4529262/94‑1 (MQ=60)
CATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCC > SRR4302534.2609247/1‑94 (MQ=60)
CATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCACTTAAACATTAGCAATGTCGATTTATCGGAGGTCC < SRR4302534.6317682/94‑1 (MQ=60)
ATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCG > SRR4302534.4575011/1‑94 (MQ=60)
CCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGAC > SRR4302534.2212034/1‑94 (MQ=60)
CCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACA < SRR4302534.4526916/94‑1 (MQ=60)
CCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAG > SRR4302534.6413870/1‑94 (MQ=60)
CACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTC < SRR4302534.948027/94‑1 (MQ=60)
ACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCC > SRR4302534.466777/1‑94 (MQ=60)
CTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCC > SRR4302534.520561/1‑94 (MQ=60)
CTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCC > SRR4302534.5551384/1‑94 (MQ=60)
TCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCA < SRR4302534.3743587/94‑1 (MQ=60)
TTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACA > SRR4302534.3789734/1‑94 (MQ=60)
TGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAG < SRR4302534.5142301/94‑1 (MQ=60)
TGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAG > SRR4302534.4320376/1‑94 (MQ=60)
TGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAG < SRR4302534.2769799/94‑1 (MQ=60)
TGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAG < SRR4302534.6615594/94‑1 (MQ=60)
TCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAG < SRR4302534.5929837/94‑1 (MQ=60)
CGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGA > SRR4302534.264366/1‑94 (MQ=60)
GTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAA > SRR4302534.5554382/1‑94 (MQ=60)
GTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAA > SRR4302534.2941998/1‑94 (MQ=60)
TTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAA > SRR4302534.1385115/1‑94 (MQ=60)
TTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAA < SRR4302534.4550798/94‑1 (MQ=60)
TATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAA > SRR4302534.6211255/1‑94 (MQ=60)
ATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAAC > SRR4302534.1652798/1‑94 (MQ=60)
CAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCG > SRR4302534.6312937/1‑94 (MQ=60)
CACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTA < SRR4302534.1614503/94‑1 (MQ=60)
ACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAA < SRR4302534.1981980/94‑1 (MQ=60)
ACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAA < SRR4302534.5509051/94‑1 (MQ=60)
GCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAAT < SRR4302534.548451/94‑1 (MQ=60)
CTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATT < SRR4302534.3202974/94‑1 (MQ=60)
CTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATT > SRR4302534.6339588/1‑94 (MQ=60)
TTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTG < SRR4302534.2755232/94‑1 (MQ=60)
TCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGG < SRR4302534.4798398/94‑1 (MQ=60)
CAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGA > SRR4302534.453576/1‑94 (MQ=60)
AGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGAC > SRR4302534.3470103/1‑94 (MQ=60)
AGCGTTACCTTGCCCTTAAACATTAGCAATGTCGGTTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCG > SRR4302534.84398/1‑94 (MQ=60)
AGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCG > SRR4302534.4946845/1‑94 (MQ=60)
TTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTT < SRR4302534.4348025/94‑1 (MQ=60)
TTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTT < SRR4302534.1344191/94‑1 (MQ=60)
TTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTT > SRR4302534.365308/1‑94 (MQ=60)
TTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGGTT > SRR4302534.6644514/1‑94 (MQ=60)
ACCTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCG < SRR4302534.3610242/94‑1 (MQ=60)
CTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCT < SRR4302534.1628284/94‑1 (MQ=60)
CTTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCT < SRR4302534.1728428/94‑1 (MQ=60)
TTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTA < SRR4302534.2520594/94‑1 (MQ=60)
TTGCCCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTA < SRR4302534.5868318/94‑1 (MQ=60)
GCCCTTAAACATTAGCAACGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACT < SRR4302534.6592328/94‑1 (MQ=60)
CCTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTC < SRR4302534.5573951/94‑1 (MQ=60)
CTTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCA > SRR4302534.2074493/1‑94 (MQ=60)
TTAAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAA < SRR4302534.241594/94‑1 (MQ=60)
AAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAAC < SRR4302534.5925986/94‑1 (MQ=60)
AAACATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAAC > SRR4302534.5136784/1‑94 (MQ=60)
AACATTAGGAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACA > SRR4302534.6531892/1‑94 (MQ=60)
CATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGA > SRR4302534.3953870/1‑94 (MQ=60)
CATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGA < SRR4302534.5723198/94‑1 (MQ=60)
CATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGA > SRR4302534.5829676/1‑94 (MQ=60)
ATTAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAA > SRR4302534.2638121/1‑94 (MQ=60)
ATTAGCAATGTCGATTTATCGGAGGGCCGACAGCCACCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAA < SRR4302534.2514922/94‑1 (MQ=60)
TAGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGG < SRR4302534.5732993/94‑1 (MQ=60)
AGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGG < SRR4302534.5038449/94‑1 (MQ=60)
AGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGG > SRR4302534.2827039/1‑94 (MQ=60)
AGCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGG < SRR4302534.2097063/94‑1 (MQ=60)
GCAATGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGT < SRR4302534.379533/94‑1 (MQ=60)
TGTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAA < SRR4302534.3704551/94‑1 (MQ=60)
GTCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAAC < SRR4302534.3725172/94‑1 (MQ=60)
TCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACC < SRR4302534.4059663/94‑1 (MQ=60)
TCGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACC > SRR4302534.24648/1‑94 (MQ=60)
CGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCT < SRR4302534.4150330/94‑1 (MQ=60)
CGATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCT > SRR4302534.2417997/1‑94 (MQ=60)
GATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTT < SRR4302534.5381026/94‑1 (MQ=60)
ATTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTT < SRR4302534.1629610/94‑1 (MQ=60)
TTTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTG < SRR4302534.2105456/94‑1 (MQ=60)
TTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGC > SRR4302534.1074349/1‑94 (MQ=60)
TTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGC < SRR4302534.3419992/94‑1 (MQ=60)
TTATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGC < SRR4302534.1228366/94‑1 (MQ=60)
ATCGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGCCG < SRR4302534.5452511/94‑1 (MQ=60)
CGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGCCGAT > SRR4302534.796970/1‑94 (MQ=60)
CGGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGCCGAT > SRR4302534.1439633/1‑94 (MQ=60)
GGAGGGCCGACGGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGCCGATG < SRR4302534.4421711/94‑1 (MQ=60)
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TATTTTTCATCCCCATCACTCTTGATCGTTATCAATTCCCACGCTGTTTCAGAGCGTTACCTTGCCCTTAAACATTAGCAATGTCGATTTATCAGAGGGCCGACAGGCTCCCACAGGAGAAAACCGATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGCCGATG > NC_000913/1278961‑1279147
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
