Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,342,604 |
G→A |
A10A (GCC→GCT) |
b4523 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,342,604 | 0 | G | A | 100.0%
| 945.3
/ NA
| 240 | A10A (GCC→GCT) | b4523 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (148/92); total (148/92) |
Only 100 of 241 total aligned reads displayed.
CAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGA > NC_000913/1342514‑1342693
|
aaGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCa > 1:1436840/1‑93 (MQ=255)
aaGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCa > 1:4618779/1‑93 (MQ=255)
agagTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCaa > 1:867492/1‑93 (MQ=255)
agagTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCaa > 1:5637418/1‑93 (MQ=255)
agagTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCaa > 2:5636362/1‑93 (MQ=255)
gagTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAAc < 1:1796451/93‑1 (MQ=255)
gtttCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCCCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAAcg < 2:3930359/91‑1 (MQ=255)
agTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAAcg > 1:4368904/1‑93 (MQ=255)
gTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGTATATCTAACACAATATCAATACGTTCAGCAActc > 1:1006469/1‑91 (MQ=255)
gTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAAcgc < 2:1819032/93‑1 (MQ=255)
gTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAAcgc > 2:4563758/1‑93 (MQ=255)
ttCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAAcgcg > 1:3621945/1‑93 (MQ=255)
tCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACgcgc < 1:2519217/93‑1 (MQ=255)
tGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTg > 2:2137357/1‑93 (MQ=255)
tGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTg > 2:4540209/1‑93 (MQ=255)
tttAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGc > 2:5411018/1‑93 (MQ=255)
tttAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGc > 1:5975022/1‑93 (MQ=255)
tttAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGc < 2:2562375/93‑1 (MQ=255)
ttAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCa > 1:2579118/1‑93 (MQ=255)
ttAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCa > 2:370281/1‑93 (MQ=255)
ttAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCa > 2:4265951/1‑93 (MQ=255)
aaGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATc > 1:4473123/1‑93 (MQ=255)
tATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCaaa > 1:2817622/1‑93 (MQ=255)
tATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCaaa < 2:4445715/93‑1 (MQ=255)
aTCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAAt > 2:3262884/1‑93 (MQ=255)
ctcGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTc < 2:2268996/93‑1 (MQ=255)
tcGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGCTATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCa > 1:331826/1‑93 (MQ=255)
tcGAGATTATGGATCGCAGAGAGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGGATCAAATTCa > 1:4773572/1‑93 (MQ=255)
gagaTTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGa > 2:4176276/1‑93 (MQ=255)
gagaTGATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGa < 2:5356773/93‑1 (MQ=255)
agaTTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGAc < 1:1630063/93‑1 (MQ=255)
agaTTAGGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGAc < 2:63/93‑1 (MQ=255)
gaTTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACa < 1:4570541/93‑1 (MQ=255)
aTTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACAt > 1:5800972/1‑93 (MQ=255)
ttATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATc > 2:4705352/1‑93 (MQ=255)
ggATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAgg > 1:1739646/1‑93 (MQ=255)
gATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGa < 2:2747262/93‑1 (MQ=255)
gATCGCAGAGTGGTAACCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGa < 2:3177837/93‑1 (MQ=255)
aTCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGAc > 2:1163523/1‑93 (MQ=255)
aTCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGAc > 1:5249318/1‑93 (MQ=255)
gCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATc > 1:578046/1‑93 (MQ=255)
gCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATc > 2:5022713/1‑93 (MQ=255)
gCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATc < 2:4907060/93‑1 (MQ=255)
gCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATc < 2:5186975/93‑1 (MQ=255)
agagTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCt > 1:5931951/1‑93 (MQ=255)
agagTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCt < 2:3470769/93‑1 (MQ=255)
agagTGGTAAGCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCt < 1:399993/93‑1 (MQ=255)
gagTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCtt > 1:2369343/1‑93 (MQ=255)
agTGGTATTCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTta < 2:5091322/93‑1 (MQ=255)
agTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTta > 2:3811852/1‑93 (MQ=255)
gTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTtat < 2:119496/93‑1 (MQ=255)
tGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTtata < 1:1033636/93‑1 (MQ=255)
gTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGc < 2:683771/93‑1 (MQ=255)
tAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCa > 1:4172628/1‑93 (MQ=255)
aaTCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCaa > 2:852056/1‑93 (MQ=255)
aaTCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCaa > 1:2153824/1‑93 (MQ=255)
aTCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCaaa > 2:198175/1‑93 (MQ=255)
tCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCaaaa > 2:2011653/1‑93 (MQ=255)
cGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAg < 1:4628970/93‑1 (MQ=255)
cGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAg < 2:1607820/93‑1 (MQ=255)
ccTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAggg < 1:2989291/93‑1 (MQ=255)
ccTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAggg > 2:4796108/1‑93 (MQ=255)
cTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAgggg > 1:3401970/1‑93 (MQ=255)
tGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAggggg > 1:4808220/1‑93 (MQ=255)
acaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaca > 2:334262/1‑91 (MQ=255)
acaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaaa > 1:5076783/1‑93 (MQ=255)
acaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaaa > 2:2718672/1‑93 (MQ=255)
acaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaaa > 2:1331175/1‑93 (MQ=255)
aaGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATg < 2:3276444/93‑1 (MQ=255)
aGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGa > 2:310976/1‑93 (MQ=255)
aGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGa < 1:1095854/93‑1 (MQ=255)
ggATTTCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCTAGGTCATCCTCATATCAAAAGGGGGAAAATGaa > 1:6467383/1‑93 (MQ=255)
ggATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaa < 2:5922170/93‑1 (MQ=255)
ggATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaa > 2:3519671/1‑93 (MQ=255)
gATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaat < 1:2417278/93‑1 (MQ=255)
atatCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaata < 2:1033650/93‑1 (MQ=255)
atatCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaata < 2:720545/93‑1 (MQ=255)
tatCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaataa > 2:5800248/1‑93 (MQ=255)
tatCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaataa > 1:6346022/1‑93 (MQ=255)
atCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaataat > 2:5570215/1‑93 (MQ=255)
tCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATg > 1:2282619/1‑93 (MQ=255)
cTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGc > 2:1529304/1‑93 (MQ=255)
cacaATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCaaaa < 2:208733/93‑1 (MQ=255)
acaATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGaaaaaa > 1:737926/1‑93 (MQ=255)
aaTATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAAtt > 1:2010933/1‑93 (MQ=255)
atatCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTg > 1:3511023/1‑93 (MQ=255)
tatCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGc > 1:2098636/1‑93 (MQ=255)
tatCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGc < 2:5530838/93‑1 (MQ=255)
atCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGcc < 1:3919906/93‑1 (MQ=255)
tCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCg > 1:498477/1‑93 (MQ=255)
cAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGc < 2:5247097/93‑1 (MQ=255)
cAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGc < 1:5030875/93‑1 (MQ=255)
cAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGc < 2:6111106/93‑1 (MQ=255)
cAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGc < 1:774235/93‑1 (MQ=255)
aaTACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCt > 2:4955553/1‑93 (MQ=255)
aaTACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCt < 2:736509/93‑1 (MQ=255)
aCGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTaaa > 1:6079090/1‑93 (MQ=255)
gTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAag > 1:5276594/1‑93 (MQ=255)
ttCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAaga > 2:2254800/1‑93 (MQ=255)
ttCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAaga > 1:3155641/1‑93 (MQ=255)
|
CAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGA > NC_000913/1342514‑1342693
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAG > NC_000913/1342512‑1342697
|
CGCAAGAGTTCTGCTTTAAGTATCTAGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAG > SRR4302534.2681615/1‑94 (MQ=60)
GCAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGC < SRR4302534.2924588/94‑1 (MQ=60)
CAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCA > SRR4302534.1474660/1‑94 (MQ=60)
CAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCA < SRR4302534.4478279/94‑1 (MQ=60)
CAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCA > SRR4302534.5687647/1‑94 (MQ=60)
CAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCA > SRR4302534.4744105/1‑94 (MQ=60)
AAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAA > SRR4302534.2418851/1‑94 (MQ=60)
AAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAA > SRR4302534.889396/1‑94 (MQ=60)
AAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAA > SRR4302534.5789999/1‑94 (MQ=60)
AAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAA > SRR4302534.4747153/1‑94 (MQ=60)
GAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACG > SRR4302534.4486641/1‑94 (MQ=60)
GAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACG < SRR4302534.1843109/94‑1 (MQ=60)
AGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGTATATCTAACACAATATCAATACGTTCAGCAACTC > SRR4302534.1032285/1‑94 (MQ=60)
AGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGC > SRR4302534.5056972/1‑94 (MQ=60)
GTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCG > SRR4302534.3719320/1‑94 (MQ=60)
GTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCG > SRR4302534.385758/1‑94 (MQ=60)
TCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCT < SRR4302534.2586102/94‑1 (MQ=60)
TCTGATTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCT > SRR4302534.1770323/1‑94 (MQ=60)
CTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTG > SRR4302534.1763326/1‑94 (MQ=60)
CTCCTTTAAGTACCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATAACAATACGTTCAGCAACGCGCTG < SRR4302534.2512864/94‑1 (MQ=60)
CTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGC > SRR4302534.52613/1‑94 (MQ=60)
CTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGC > SRR4302534.3561627/1‑94 (MQ=60)
CTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGC > SRR4302534.6137301/1‑94 (MQ=60)
TTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCA > SRR4302534.2647430/1‑94 (MQ=60)
TAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATC > SRR4302534.4594120/1‑94 (MQ=60)
AAGTATCTCGAGATTATGGATCGCAGAGCGGTAATCGCCTGACACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCA > SRR4302534.3692267/1‑94 (MQ=60)
AGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAA > SRR4302534.4117001/1‑94 (MQ=60)
AGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAA > SRR4302534.4620479/1‑94 (MQ=60)
GTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAA > SRR4302534.2891741/1‑94 (MQ=60)
TATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTTAGCAACGCGCTGGGCATCAAAT > SRR4302534.6076694/1‑94 (MQ=60)
TATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAAT > SRR4302534.2257456/1‑94 (MQ=60)
ATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATT > SRR4302534.2333829/1‑94 (MQ=60)
TCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTC < SRR4302534.6110151/94‑1 (MQ=60)
TCACGAGTTTATGGATGACAGAGCGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTC < SRR4302534.6162583/94‑1 (MQ=60)
CTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGCTATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCA > SRR4302534.340355/1‑94 (MQ=60)
CTCGAGATTATGGATCGCAGAGAGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGGATCAAATTCA > SRR4302534.4903186/1‑94 (MQ=60)
TCAAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAG < SRR4302534.1550271/94‑1 (MQ=60)
GAGATTATGGATCGCAGAGCGGCAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATGCAGAC > SRR4302534.3936463/1‑94 (MQ=60)
AGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACA < SRR4302534.1672569/94‑1 (MQ=60)
AGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACA > SRR4302534.2771128/1‑94 (MQ=60)
AGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCACTGGGCATCAAATTCAGACA > SRR4302534.5200380/1‑94 (MQ=60)
GATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACAT < SRR4302534.4694458/94‑1 (MQ=60)
GATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACAT > SRR4302534.1099595/1‑94 (MQ=60)
GATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACAT > SRR4302534.5958398/1‑94 (MQ=60)
ATTATGGATCGCAGAGTGTTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATC < SRR4302534.2800278/94‑1 (MQ=60)
ATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATC > SRR4302534.4960688/1‑94 (MQ=60)
TATGGATCGCAGGGTGGTAATCGCCTGCCACAAGGATATCTAAAACAAGATCAATACGTTCAGCAACGCGCTGGGAATCAAGTTCAGACATCAA > SRR4302534.5350237/1‑94 (MQ=60)
TATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAA > SRR4302534.4065949/1‑94 (MQ=60)
TGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGG > SRR4302534.1784821/1‑94 (MQ=60)
TGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGG < SRR4302534.2446905/94‑1 (MQ=60)
GATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGAC > SRR4302534.5391128/1‑94 (MQ=60)
CGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATC > SRR4302534.592215/1‑94 (MQ=60)
GCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCC > SRR4302534.478062/1‑94 (MQ=60)
CAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCT > SRR4302534.6093038/1‑94 (MQ=60)
AGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTT > SRR4302534.2432251/1‑94 (MQ=60)
AGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTT > SRR4302534.3441871/1‑94 (MQ=60)
AGAGTGGTAAGCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTT < SRR4302534.410222/94‑1 (MQ=60)
GAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTA < SRR4302534.6613510/94‑1 (MQ=60)
AGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTAT < SRR4302534.248539/94‑1 (MQ=60)
GTGGTAATCCCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATA < SRR4302534.5405695/94‑1 (MQ=60)
TGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAG < SRR4302534.821554/94‑1 (MQ=60)
TGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAG < SRR4302534.1060307/94‑1 (MQ=60)
TGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAG < SRR4302534.6091772/94‑1 (MQ=60)
GTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCA > SRR4302534.4285337/1‑94 (MQ=60)
GTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCA > SRR4302534.4381896/1‑94 (MQ=60)
TAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAA > SRR4302534.2210678/1‑94 (MQ=60)
ATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAA > SRR4302534.3106923/1‑94 (MQ=60)
ATCACCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCACTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAA < SRR4302534.4657846/94‑1 (MQ=60)
TCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAG < SRR4302534.708813/94‑1 (MQ=60)
CGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGG < SRR4302534.4754584/94‑1 (MQ=60)
CCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGG < SRR4302534.3067445/94‑1 (MQ=60)
CCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGG > SRR4302534.6584988/1‑94 (MQ=60)
CCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGG > SRR4302534.3493314/1‑94 (MQ=60)
CCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGG > SRR4302534.3295064/1‑94 (MQ=60)
CCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGG < SRR4302534.1133220/94‑1 (MQ=60)
CTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGG > SRR4302534.4938750/1‑94 (MQ=60)
TGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGA > SRR4302534.2125157/1‑94 (MQ=60)
TGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGA < SRR4302534.774347/94‑1 (MQ=60)
GCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTTTGCCAAAAGGGGGAA > SRR4302534.1799970/1‑94 (MQ=60)
GCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAA > SRR4302534.339657/1‑94 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAA > SRR4302534.5751051/1‑94 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAA > SRR4302534.6363565/1‑94 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAA > SRR4302534.588179/1‑94 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAA > SRR4302534.5213841/1‑94 (MQ=60)
ACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAAT < SRR4302534.1035652/94‑1 (MQ=60)
AAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCGTCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGA > SRR4302534.809354/1‑94 (MQ=60)
AAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGA < SRR4302534.4702119/94‑1 (MQ=60)
AAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGA > SRR4302534.593182/1‑94 (MQ=60)
TGGATTTCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCTAGGTCATCCTCATATCAAAAGGGGGAAAATGAA > SRR4302534.6641577/1‑94 (MQ=60)
AGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAA < SRR4302534.1124367/94‑1 (MQ=60)
GATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATA < SRR4302534.2481565/94‑1 (MQ=60)
ATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAA > SRR4302534.6517410/1‑94 (MQ=60)
ATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAA > SRR4302534.4539211/1‑94 (MQ=60)
ATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATG < SRR4302534.4924901/94‑1 (MQ=60)
ATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATG > SRR4302534.2343189/1‑94 (MQ=60)
TAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAA > SRR4302534.2644368/1‑94 (MQ=60)
AACACAATTTCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAA > SRR4302534.52538/1‑94 (MQ=60)
AACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAA > SRR4302534.3988377/1‑94 (MQ=60)
ACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGTGGAAAATGAATAATGCAAAA > SRR4302534.3541002/1‑94 (MQ=60)
CACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGAAAAAA > SRR4302534.756175/1‑94 (MQ=60)
ACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAAT < SRR4302534.5136336/94‑1 (MQ=60)
CAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATT < SRR4302534.2996004/94‑1 (MQ=60)
CAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATT > SRR4302534.2063541/1‑94 (MQ=60)
AATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTG > SRR4302534.3605474/1‑94 (MQ=60)
AATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTG > SRR4302534.478030/1‑94 (MQ=60)
ATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGC > SRR4302534.2153706/1‑94 (MQ=60)
TATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCC < SRR4302534.2161305/94‑1 (MQ=60)
ATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCG > SRR4302534.510898/1‑94 (MQ=60)
ATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCG < SRR4302534.4024956/94‑1 (MQ=60)
CAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCT < SRR4302534.793527/94‑1 (MQ=60)
CAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCT < SRR4302534.5166761/94‑1 (MQ=60)
ATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAA > SRR4302534.2092713/1‑94 (MQ=60)
ATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAA > SRR4302534.979902/1‑94 (MQ=60)
TACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAA > SRR4302534.6244425/1‑94 (MQ=60)
ACTTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAA > SRR4302534.1452861/1‑94 (MQ=60)
CGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAG > SRR4302534.5419073/1‑94 (MQ=60)
GTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGA > SRR4302534.3238749/1‑94 (MQ=60)
TTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAG < SRR4302534.6214484/94‑1 (MQ=60)
TTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAG < SRR4302534.1988790/94‑1 (MQ=60)
TCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGA < SRR4302534.2543367/94‑1 (MQ=60)
AGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAG < SRR4302534.694263/94‑1 (MQ=60)
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CGCAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAG > NC_000913/1342512‑1342697
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
