Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,342,604 |
G→A |
A10A (GCC→GCT) |
b4523 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,342,604 | 0 | G | A | 99.6%
| 819.4
/ ‑5.2
| 231 | A10A (GCC→GCT) | b4523 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (145/85); total (145/86) |
| Fisher's exact test for biased strand distribution p-value = 3.72e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.82e-01 |
Only 100 of 239 total aligned reads displayed.
CAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAG > NC_000913/1342514‑1342692
|
aaGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCa > 1:6574935/1‑93 (MQ=255)
agagTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCaa < 1:56530/93‑1 (MQ=255)
agagTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCaa > 1:4059700/1‑93 (MQ=255)
gagTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAAc > 2:611940/1‑93 (MQ=255)
agTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAAcg > 2:8445087/1‑93 (MQ=255)
tCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACgcgc < 1:8823962/93‑1 (MQ=255)
tCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACgcgc > 1:7804582/1‑93 (MQ=255)
tGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTg > 2:3884324/1‑93 (MQ=255)
gCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTgg < 1:6155593/93‑1 (MQ=255)
gCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATAGCTAACACAATATCAATACGTTCAGCAACCCGCTgg > 1:8577099/1‑93 (MQ=255)
gCTTGAAGTATCTCGATATTATGAATCGCAGAGTTGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTgg < 1:266407/93‑1 (MQ=255)
tttAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGc > 2:8800175/1‑93 (MQ=255)
ttAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCa < 2:8062245/93‑1 (MQ=255)
aaGTATCTCGAGATTATGGATCGCAGAGTGGTAAACGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATc > 2:5712466/1‑93 (MQ=255)
aGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCa > 1:1183593/1‑93 (MQ=255)
gTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCaa < 2:3525882/93‑1 (MQ=255)
tctcGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAAtt > 1:7536643/1‑93 (MQ=255)
tctcGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAAtt > 2:636900/1‑93 (MQ=255)
aatggagaTTATGGATCGAAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAAtt < 2:3136264/89‑1 (MQ=255)
ctcGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTc > 2:2387061/1‑93 (MQ=255)
tcGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATAAAATTCa > 1:287962/1‑93 (MQ=255)
tcGAGATTATGGATCGCAGAGTGGGAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCa > 2:6723650/1‑93 (MQ=255)
tcGAGATAATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATGCGTTCAGCAACGCGCTGGGCATCAAATTCa < 2:7161646/93‑1 (MQ=255)
cGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAg > 2:3167129/1‑93 (MQ=255)
gagaTTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGa > 1:7680525/1‑93 (MQ=255)
gagaTTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGa > 1:3661123/1‑93 (MQ=255)
gagaTTATGGATCGCAGAGGGGTAATCGCCTGCCACAAGGATACCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCACCAAATCCAGa > 1:2216139/1‑93 (MQ=255)
agaTTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGAc > 1:886341/1‑93 (MQ=255)
aTTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACAt < 2:8719970/93‑1 (MQ=255)
ttATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATc > 1:3690238/1‑93 (MQ=255)
ttATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATc < 1:6934947/93‑1 (MQ=255)
tATGGATCGCAGAGTGGTAATCGCCTTCCACAAGGATATCTAACACAATATCAATACGTTCAACAACGCGCTGGGCATCAAATTCAGACATCa > 1:5987764/1‑93 (MQ=255)
tATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCa > 2:819882/1‑93 (MQ=255)
aTGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATCTCTAACACAATATAAATACGATCAGCAACGAGCTGTACAACAAACTCAGAACTCaa > 2:2843282/1‑93 (MQ=255)
accGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGAc < 1:2045183/91‑1 (MQ=255)
cAGAGTGCTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATcc < 2:8308980/93‑1 (MQ=255)
agTGGTACCCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTta < 2:4991169/93‑1 (MQ=255)
agTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTta < 2:8538889/93‑1 (MQ=255)
agTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTta > 1:2343939/1‑93 (MQ=255)
tGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTtata < 1:1885757/93‑1 (MQ=255)
tGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTtata > 1:4289494/1‑93 (MQ=255)
ggTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAg < 1:3335680/93‑1 (MQ=255)
gTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGc < 2:7021098/93‑1 (MQ=255)
gTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGc < 1:4473582/93‑1 (MQ=255)
gTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGc < 2:7922787/93‑1 (MQ=255)
gTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGc < 1:3077286/93‑1 (MQ=255)
aaTCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCaa > 2:4261658/1‑93 (MQ=255)
aaTCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCaa > 2:1312506/1‑93 (MQ=255)
aTCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCaaa > 2:3409133/1‑93 (MQ=255)
tCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCaaaa < 2:5186325/93‑1 (MQ=255)
cGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAg < 2:4021043/93‑1 (MQ=255)
gCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAgg > 1:3793887/1‑93 (MQ=255)
gCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAgg < 2:5593957/93‑1 (MQ=255)
ccTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAggg < 1:5213310/93‑1 (MQ=255)
cacaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaa < 1:1122579/93‑1 (MQ=255)
cacaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaa > 2:3933597/1‑93 (MQ=255)
cacaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaa < 1:8413543/93‑1 (MQ=255)
cacaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaa < 2:2646303/93‑1 (MQ=255)
acaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaaa > 2:1241310/1‑93 (MQ=255)
acaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaaa > 1:7867623/1‑93 (MQ=255)
acaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaaa > 1:5396947/1‑93 (MQ=255)
acaAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGaaaa > 2:8646536/1‑93 (MQ=255)
acaAGGATATCTAACACAATATCAATACGTTCAGCAACCCGCTGGGCATCAAATTCAGACATCAACGACATCCTTATAGCAAAAGGGGGcaaa > 1:6403297/1‑93 (MQ=255)
aGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGa > 2:6193036/1‑93 (MQ=255)
aGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGa > 1:4849035/1‑93 (MQ=255)
aGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGa > 2:5244780/1‑93 (MQ=255)
gATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaat < 1:5527724/93‑1 (MQ=255)
gATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaat > 1:3194181/1‑93 (MQ=255)
gATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaat > 1:4712693/1‑93 (MQ=255)
atatCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaata < 1:1999882/93‑1 (MQ=255)
atatCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaata < 2:6490388/93‑1 (MQ=255)
tatCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGaataa > 2:2008983/1‑93 (MQ=255)
tCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATg < 1:6697639/93‑1 (MQ=255)
cTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGc > 1:1065102/1‑93 (MQ=255)
cTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGc < 2:3378956/93‑1 (MQ=255)
cTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGc < 2:4514776/93‑1 (MQ=255)
cTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGc < 2:7263586/93‑1 (MQ=255)
tAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCa > 1:6436462/1‑93 (MQ=255)
acacAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGaaaa > 2:6784599/1‑93 (MQ=255)
acacAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCaaa > 2:2261946/1‑93 (MQ=255)
cacaATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCACAAGGGGGAAAATGAATAATGCaaaa > 2:7495273/1‑93 (MQ=255)
cacaATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCaaaa < 2:7598070/93‑1 (MQ=255)
acaATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCaaaaa > 1:1063250/1‑93 (MQ=255)
atatCAATACGTTGAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTg > 1:5801589/1‑93 (MQ=255)
atatCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTg > 1:2167686/1‑93 (MQ=255)
atCAATACGTTCAGCAACGCGCTGTGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGcc < 2:6174075/93‑1 (MQ=255)
atCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGcc > 2:6884874/1‑93 (MQ=255)
tCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCg > 1:2472941/1‑93 (MQ=255)
cAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGc > 1:157174/1‑93 (MQ=255)
aaTACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCt < 2:2152848/93‑1 (MQ=255)
aTACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTa > 1:2984850/1‑93 (MQ=255)
aTACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTa > 2:6314511/1‑93 (MQ=255)
tACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTaa > 1:8598991/1‑93 (MQ=255)
tACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTaa > 1:7707303/1‑93 (MQ=255)
aCGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTaaa > 2:2672320/1‑93 (MQ=255)
cGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTaaaa < 2:3622198/93‑1 (MQ=255)
cGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTaaaa < 2:3056107/93‑1 (MQ=255)
cGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTaaaa > 1:528175/1‑93 (MQ=255)
cGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTaaaa < 2:2528899/93‑1 (MQ=255)
gTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAag > 2:1414180/1‑93 (MQ=255)
|
CAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAG > NC_000913/1342514‑1342692
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAG > NC_000913/1342512‑1342697
|
CGCAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAG > SRR4302541.5302301/1‑94 (MQ=60)
GCAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGC > SRR4302541.3561376/1‑94 (MQ=60)
CAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCA < SRR4302541.4580857/94‑1 (MQ=60)
CAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCA > SRR4302541.3063716/1‑94 (MQ=60)
CAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCA > SRR4302541.6642202/1‑94 (MQ=60)
AAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAA > SRR4302541.4099764/1‑94 (MQ=60)
AAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAA > SRR4302541.794909/1‑94 (MQ=60)
AGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAAC < SRR4302541.56975/94‑1 (MQ=60)
AGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAAC > SRR4302541.2118404/1‑94 (MQ=60)
GAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACG > SRR4302541.2379363/1‑94 (MQ=60)
AGTTCTGCTTTAAGTATCTCGAGATTAGGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGC < SRR4302541.8828025/94‑1 (MQ=60)
TTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGC > SRR4302541.7888736/1‑94 (MQ=60)
TCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCT < SRR4302541.8918123/94‑1 (MQ=60)
TCTGCTTTAAGTATCTCGAGATCATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCT > SRR4302541.4608169/1‑94 (MQ=60)
TGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGG > SRR4302541.2551554/1‑94 (MQ=60)
TGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATAGCTAACACAATATCAATACGTTCAGCAACCCGCTGG > SRR4302541.8669193/1‑94 (MQ=60)
GCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGG < SRR4302541.6218494/94‑1 (MQ=60)
GCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGG < SRR4302541.6218495/94‑1 (MQ=60)
GCTTGAAGTATCTCGATATTATGAATCGCAGAGTTGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGG < SRR4302541.268594/94‑1 (MQ=60)
CTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGC > SRR4302541.280216/1‑94 (MQ=60)
CTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGC > SRR4302541.6962908/1‑94 (MQ=60)
TTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCA > SRR4302541.6328932/1‑94 (MQ=60)
TTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCAT < SRR4302541.1167912/94‑1 (MQ=60)
AAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCA > SRR4302541.1195039/1‑94 (MQ=60)
AAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCCCTGGGCATCA > SRR4302541.3724487/1‑94 (MQ=60)
GTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAA > SRR4302541.1138920/1‑94 (MQ=60)
ATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATT > SRR4302541.7617201/1‑94 (MQ=60)
CTGGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCA < SRR4302541.8183453/94‑1 (MQ=60)
CTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATCTCAATACGTTAGGCAACcgcctggaaatcaaattca > SRR4302541.290434/1‑75 (MQ=60)
CTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATAAAATTCA > SRR4302541.290435/1‑94 (MQ=60)
CGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGA > SRR4302541.3698270/1‑94 (MQ=60)
CGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGA > SRR4302541.7762174/1‑94 (MQ=60)
CGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGA > SRR4302541.2237622/1‑94 (MQ=60)
CGAGATTATGGATCGCAGAGGGGTAATCGCCTGCCACAAGGATACCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCACCAAATCCAGA > SRR4302541.2237623/1‑94 (MQ=60)
GAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGAC > SRR4302541.894459/1‑94 (MQ=60)
GAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGAC > SRR4302541.3205501/1‑94 (MQ=60)
GAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGAC > SRR4302541.894460/1‑94 (MQ=60)
GAGATTATGGATCGCAGAGTGGTAACGGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGAC < SRR4302541.5113325/94‑1 (MQ=60)
ATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATC > SRR4302541.3727575/1‑94 (MQ=60)
TTATGGATCGCAGAGTGGTAATCGCCTTCCACAAGGATATCTAACACAATATCAATACGTTCAACAACGCGCTGGGCATCAAATTCAGACATCA > SRR4302541.6049086/1‑94 (MQ=60)
TTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCA < SRR4302541.7008936/94‑1 (MQ=60)
ATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAG > SRR4302541.4982129/1‑94 (MQ=60)
TGGTTCGGAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGG < SRR4302541.4012620/94‑1 (MQ=60)
TGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGG < SRR4302541.1098540/94‑1 (MQ=60)
TGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGG < SRR4302541.1645510/94‑1 (MQ=60)
GGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGA > SRR4302541.2330741/1‑94 (MQ=60)
GAGCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGAC < SRR4302541.1945470/94‑1 (MQ=60)
ATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACA > SRR4302541.3188189/1‑94 (MQ=60)
ACCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACA < SRR4302541.2064925/94‑1 (MQ=60)
CGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATC > SRR4302541.5504317/1‑94 (MQ=60)
CGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATC > SRR4302541.5920680/1‑94 (MQ=60)
GCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCC < SRR4302541.196512/94‑1 (MQ=60)
AGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTT > SRR4302541.1374880/1‑94 (MQ=60)
AGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTT > SRR4302541.865699/1‑94 (MQ=60)
AGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTT > SRR4302541.6761946/1‑94 (MQ=60)
GAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTA < SRR4302541.7885996/94‑1 (MQ=60)
GAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTA > SRR4302541.2366712/1‑94 (MQ=60)
GTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATA > SRR4302541.8703269/1‑94 (MQ=60)
GTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATA > SRR4302541.4332355/1‑94 (MQ=60)
TGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAG < SRR4302541.1903869/94‑1 (MQ=60)
TGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAG < SRR4302541.5302116/94‑1 (MQ=60)
tgtaacgGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGC < SRR4302541.4576088/87‑1 (MQ=60)
GGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGC < SRR4302541.3369065/94‑1 (MQ=60)
GTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCA < SRR4302541.3108509/94‑1 (MQ=60)
GTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCA < SRR4302541.4518656/94‑1 (MQ=60)
TCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAG < SRR4302541.6506726/94‑1 (MQ=60)
CGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGG > SRR4302541.3832051/1‑94 (MQ=60)
CGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGG < SRR4302541.965612/94‑1 (MQ=60)
CGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGG > SRR4302541.7779424/1‑94 (MQ=60)
CGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGG > SRR4302541.3832049/1‑94 (MQ=60)
CGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGG > SRR4302541.7249647/1‑94 (MQ=60)
CCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGG < SRR4302541.4853591/94‑1 (MQ=60)
CCTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGG < SRR4302541.5267025/94‑1 (MQ=60)
CTGCCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGG < SRR4302541.6481771/94‑1 (MQ=60)
CCACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAA < SRR4302541.7605372/94‑1 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAA < SRR4302541.4058550/94‑1 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAA < SRR4302541.1133151/94‑1 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAA > SRR4302541.6517365/1‑94 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAA < SRR4302541.8504520/94‑1 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAA > SRR4302541.5452330/1‑94 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAA > SRR4302541.7954057/1‑94 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAA > SRR4302541.3003450/1‑94 (MQ=60)
CACAAGGATATCTAACACAATATCAATACGTTCAGCAACCCGCTGGGCATCAAATTCAGACATCAACGACATCCTTATAGCAAAAGGGGGCAAA > SRR4302541.6468629/1‑94 (MQ=60)
AAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGA < SRR4302541.5440510/94‑1 (MQ=60)
AAGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGA > SRR4302541.4898474/1‑94 (MQ=60)
AGGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAA > SRR4302541.3288881/1‑94 (MQ=60)
GGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAAT > SRR4302541.3226448/1‑94 (MQ=60)
GGATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAAT > SRR4302541.4760737/1‑94 (MQ=60)
GATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATA < SRR4302541.5584314/94‑1 (MQ=60)
ATATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAA < SRR4302541.2019252/94‑1 (MQ=60)
TATCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAAT < SRR4302541.4385926/94‑1 (MQ=60)
TCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGC < SRR4302541.6767605/94‑1 (MQ=60)
TCTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGC > SRR4302541.1075013/1‑94 (MQ=60)
TCTAACACAATATCAATACGTTCAGCAACGCGCTGAGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGC > SRR4302541.1075012/1‑94 (MQ=60)
CTAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCA > SRR4302541.6502060/1‑94 (MQ=60)
TAACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAA < SRR4302541.5617779/94‑1 (MQ=60)
AACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAA > SRR4302541.3410161/1‑94 (MQ=60)
AACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAA > SRR4302541.2097994/1‑94 (MQ=60)
ACACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAATGGGGGAAAATGAATAATGCAAAA < SRR4302541.8628523/94‑1 (MQ=60)
CACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAA > SRR4302541.1073133/1‑94 (MQ=60)
CACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAA > SRR4302541.7623753/1‑94 (MQ=60)
ACAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAAT < SRR4302541.5857698/94‑1 (MQ=60)
CAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATT > SRR4302541.5466110/1‑94 (MQ=60)
CAATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTACAGCAAAAGGGGGAAAATGAATAATGCAAAAATG > SRR4302541.7918104/1‑94 (MQ=60)
AATATCAATACGTTGAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTG > SRR4302541.5860510/1‑94 (MQ=60)
AATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTG > SRR4302541.2188646/1‑94 (MQ=60)
ATATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGC > SRR4302541.2448073/1‑94 (MQ=60)
ATCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCG > SRR4302541.2497700/1‑94 (MQ=60)
TCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGC > SRR4302541.158352/1‑94 (MQ=60)
TCAATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGC > SRR4302541.2025708/1‑94 (MQ=60)
CAATACGTTCAGCAACGCTCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCT > SRR4302541.4309101/1‑94 (MQ=60)
AATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTA > SRR4302541.3014971/1‑94 (MQ=60)
AATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTA > SRR4302541.7840024/1‑94 (MQ=60)
AATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTA < SRR4302541.5797781/94‑1 (MQ=60)
ATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAA > SRR4302541.8691242/1‑94 (MQ=60)
ATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAA < SRR4302541.613108/94‑1 (MQ=60)
ATACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAA > SRR4302541.7789266/1‑94 (MQ=60)
ACGTTCAGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAA > SRR4302541.533125/1‑94 (MQ=60)
AGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAG < SRR4302541.8141167/94‑1 (MQ=60)
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CGCAAGAGTTCTGCTTTAAGTATCTCGAGATTATGGATCGCAGAGTGGTAATCGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAG > NC_000913/1342512‑1342697
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
