Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,585,075 |
A→G |
S228S (AGT→AGC) |
b1502 ← |
putative adhesin |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,585,075 | 0 | A | G | 100.0%
| 612.6
/ NA
| 176 | S228S (AGT→AGC) | b1502 | putative adhesin |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (82/94); total (82/94) |
Only 100 of 188 total aligned reads displayed.
AGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAA > NC_000913/1584985‑1585164
|
aGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGgctgct > 1:243980/1‑93 (MQ=255)
aGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGGCGgctgct > 1:2606949/1‑93 (MQ=255)
gCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGctgctg > 2:2139044/1‑93 (MQ=255)
gCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGctgctg > 2:5390542/1‑93 (MQ=255)
ccAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGt > 1:5319962/1‑93 (MQ=255)
ccAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGt > 2:1653735/1‑93 (MQ=255)
ccAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGCGCTGTGTTAGCAAACACTTGTCGGctgctgc > 1:4282670/1‑92 (MQ=255)
cAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTc > 1:4810269/1‑93 (MQ=255)
aGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCa > 2:1511332/1‑93 (MQ=255)
gTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAg < 1:5651559/93‑1 (MQ=255)
tATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgt < 1:3503692/93‑1 (MQ=255)
aTTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtg > 2:1601015/1‑93 (MQ=255)
tttttCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtgg < 2:4419807/93‑1 (MQ=255)
tttttCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtgg > 1:4640054/1‑93 (MQ=255)
tttttCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtgg < 2:886539/93‑1 (MQ=255)
ttttCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtggt < 2:2856606/93‑1 (MQ=255)
tttCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtggtg < 1:1958630/93‑1 (MQ=255)
tCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGc < 2:1521398/93‑1 (MQ=255)
ccATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGtggtggaa > 1:2204995/1‑91 (MQ=255)
ttACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCAccc > 1:747895/1‑93 (MQ=255)
ttACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCAccc < 1:1264277/93‑1 (MQ=255)
gCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGaaa < 2:2315410/93‑1 (MQ=255)
cATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAg < 2:3218720/93‑1 (MQ=255)
ttAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGAt < 2:4944786/93‑1 (MQ=255)
ttAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGAt > 1:3955105/1‑93 (MQ=255)
agagTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATaa > 1:4327960/1‑93 (MQ=255)
agagTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCCAAAGATaa > 2:4127115/1‑93 (MQ=255)
gagTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATaaa < 2:4309871/93‑1 (MQ=255)
gagTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATaaa > 1:5172143/1‑93 (MQ=255)
gTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAAt > 1:663851/1‑93 (MQ=255)
gTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAAt > 2:6379189/1‑93 (MQ=255)
tGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATg < 2:1935473/93‑1 (MQ=255)
gACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATga < 1:4919262/93‑1 (MQ=255)
acacCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATgag > 2:6261147/1‑93 (MQ=255)
acacCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATgag < 1:5877569/93‑1 (MQ=255)
cacCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATgaga < 2:6246822/93‑1 (MQ=255)
acCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGagag > 1:3027413/1‑93 (MQ=255)
acCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGagag < 2:4535098/93‑1 (MQ=255)
ccACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCt > 1:6408889/1‑93 (MQ=255)
ccACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCt > 1:5721123/1‑93 (MQ=255)
ccACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCt > 2:3856803/1‑93 (MQ=255)
ccACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCt < 1:1021713/93‑1 (MQ=255)
cACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCtt > 2:983627/1‑93 (MQ=255)
ccTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCttt < 1:3108919/92‑1 (MQ=255)
ccTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCttt < 2:2492038/92‑1 (MQ=255)
ccTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCttt < 2:2025965/92‑1 (MQ=255)
aCTCCCGATGCTTTTGTTGAATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCttt > 1:6297776/1‑93 (MQ=255)
cTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCtttt > 2:2330225/1‑93 (MQ=255)
tCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTg > 1:4102199/1‑93 (MQ=255)
cccGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGt > 1:6010732/1‑93 (MQ=255)
cGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTc > 2:2235899/1‑93 (MQ=255)
cGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTc < 2:2211112/93‑1 (MQ=255)
cGATGCTTTTCTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGGTAAAATGAGAGCTTTTGTTc > 2:4335184/1‑93 (MQ=255)
gATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCg < 1:5253433/93‑1 (MQ=255)
gATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCg > 2:5286458/1‑93 (MQ=255)
aTGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGc < 2:2989004/93‑1 (MQ=255)
aTGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGc > 1:2097073/1‑93 (MQ=255)
tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt > 2:6109409/1‑93 (MQ=255)
tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt > 2:839830/1‑93 (MQ=255)
tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt > 2:4870193/1‑93 (MQ=255)
tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt < 2:749147/93‑1 (MQ=255)
tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt < 1:5799272/93‑1 (MQ=255)
tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt > 2:5863133/1‑93 (MQ=255)
gCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCtt < 1:2000657/93‑1 (MQ=255)
gCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCtt < 1:3033072/93‑1 (MQ=255)
cTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTg > 2:681213/1‑93 (MQ=255)
cTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTg < 1:4941785/93‑1 (MQ=255)
cTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTg > 2:4790694/1‑93 (MQ=255)
ttttGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGa > 2:3237819/1‑93 (MQ=255)
ttttGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGa > 2:1768565/1‑93 (MQ=255)
tttGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAg < 1:1073897/93‑1 (MQ=255)
gttgCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCaa < 2:5455895/93‑1 (MQ=255)
aTCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATAc < 2:3618371/93‑1 (MQ=255)
aTCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATAc > 1:5502941/1‑93 (MQ=255)
tCAGGTGCTGTGTTAGCCAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACg > 1:3128914/1‑93 (MQ=255)
cAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGc < 1:628492/93‑1 (MQ=255)
cAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGc < 2:499001/93‑1 (MQ=255)
ggTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCa < 1:4580622/93‑1 (MQ=255)
ggTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCa > 2:3401623/1‑93 (MQ=255)
gCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAgg < 2:4826147/93‑1 (MQ=255)
gCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAgg > 2:1312589/1‑93 (MQ=255)
cTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAggg > 2:1539305/1‑93 (MQ=255)
tgtTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTa < 2:2612279/93‑1 (MQ=255)
gtTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTAt > 2:4509591/1‑93 (MQ=255)
ttAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTAtt < 1:1467656/93‑1 (MQ=255)
tAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTAttt > 1:4330437/1‑93 (MQ=255)
tAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTAttt > 1:5350981/1‑93 (MQ=255)
aGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGGCAAGGGGTATTTc > 2:4380337/1‑93 (MQ=255)
aGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTc < 2:12144/93‑1 (MQ=255)
aaaCACTTGTCGGCTGCTGTCAGTGGTGGCGCCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTgc < 1:1898884/93‑1 (MQ=255)
aaaCACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTgc > 2:4208486/1‑93 (MQ=255)
aaCACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTgcg > 1:1606788/1‑93 (MQ=255)
acacTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTgcgc < 2:5179077/93‑1 (MQ=255)
cTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTc < 1:899465/93‑1 (MQ=255)
cTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTc < 1:6253096/93‑1 (MQ=255)
cTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTc > 1:3274414/1‑93 (MQ=255)
cTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTc > 1:2810820/1‑93 (MQ=255)
tGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCa < 2:4178851/93‑1 (MQ=255)
gctgctGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGaaa > 1:167066/1‑93 (MQ=255)
gctgctGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGaaa < 2:6426156/93‑1 (MQ=255)
|
AGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAA > NC_000913/1584985‑1585164
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGTCC > NC_000913/1584982‑1585168
|
CGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTG < SRR4302534.2154506/94‑1 (MQ=60)
TAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCT > SRR4302534.250366/1‑94 (MQ=60)
TAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGGCGGCTGCT > SRR4302534.2675929/1‑94 (MQ=60)
GCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGT > SRR4302534.5463444/1‑94 (MQ=60)
CCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTC > SRR4302534.4940854/1‑94 (MQ=60)
GTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGT < SRR4302534.5804531/94‑1 (MQ=60)
TATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTG < SRR4302534.3597941/94‑1 (MQ=60)
ATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGG < SRR4302534.3182411/94‑1 (MQ=60)
ATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGG > SRR4302534.4765966/1‑94 (MQ=60)
TTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTG > SRR4302534.4018321/1‑94 (MQ=60)
TTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGG < SRR4302534.2009887/94‑1 (MQ=60)
TTTCCATTACGCAGTAGAGTGACACCCACTCCCGAAGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGG < SRR4302534.4915855/94‑1 (MQ=60)
TCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCA > SRR4302534.2000959/1‑94 (MQ=60)
TCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGAA > SRR4302534.2263350/1‑94 (MQ=60)
ATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCC > SRR4302534.766429/1‑94 (MQ=60)
TTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCG < SRR4302534.1297578/94‑1 (MQ=60)
ATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGAT > SRR4302534.4060995/1‑94 (MQ=60)
TTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATA < SRR4302534.1501670/94‑1 (MQ=60)
TAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAA > SRR4302534.4445028/1‑94 (MQ=60)
AGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAA > SRR4302534.5311543/1‑94 (MQ=60)
AGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAAT > SRR4302534.680012/1‑94 (MQ=60)
GACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAG < SRR4302534.5052593/94‑1 (MQ=60)
ACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGA > SRR4302534.5074729/1‑94 (MQ=60)
ACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGA < SRR4302534.6037145/94‑1 (MQ=60)
TACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAG > SRR4302534.3106772/1‑94 (MQ=60)
CCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCT < SRR4302534.4143344/94‑1 (MQ=60)
CCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCT > SRR4302534.6581849/1‑94 (MQ=60)
CCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCT > SRR4302534.5876118/1‑94 (MQ=60)
CCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTT < SRR4302534.1048025/94‑1 (MQ=60)
CAACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGCGGTGGCACCCGAAAGATAAAATGAGAGCTT > SRR4302534.1594735/1‑94 (MQ=60)
CACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTT < SRR4302534.256154/94‑1 (MQ=60)
CACTCCCGATGCTTTTGTTGAATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTT > SRR4302534.6468102/1‑94 (MQ=60)
CCTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTT < SRR4302534.3190671/94‑1 (MQ=60)
ACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTT > SRR4302534.728105/1‑94 (MQ=60)
ACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTT > SRR4302534.4442380/1‑94 (MQ=60)
CTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTG > SRR4302534.4212507/1‑94 (MQ=60)
TCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGT > SRR4302534.6174039/1‑94 (MQ=60)
TCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGT > SRR4302534.2688525/1‑94 (MQ=60)
TCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGT < SRR4302534.6609475/94‑1 (MQ=60)
CCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTT > SRR4302534.3289883/1‑94 (MQ=60)
CCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTT < SRR4302534.5890811/94‑1 (MQ=60)
CGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCG > SRR4302534.6030303/1‑94 (MQ=60)
GATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGC < SRR4302534.5395391/94‑1 (MQ=60)
GATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGC > SRR4302534.2152089/1‑94 (MQ=60)
ATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCT > SRR4302534.2204232/1‑94 (MQ=60)
TGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTT < SRR4302534.5956647/94‑1 (MQ=60)
GCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTG < SRR4302534.2053044/94‑1 (MQ=60)
GCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTG < SRR4302534.3112609/94‑1 (MQ=60)
CTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGA < SRR4302534.5075678/94‑1 (MQ=60)
CTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGA < SRR4302534.6225197/94‑1 (MQ=60)
TTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGC < SRR4302534.1101764/94‑1 (MQ=60)
TTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCA > SRR4302534.5325634/1‑94 (MQ=60)
CATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATAC > SRR4302534.5651361/1‑94 (MQ=60)
ATCAGGTGCTGTGTTAGCCAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACG > SRR4302534.3211170/1‑94 (MQ=60)
CAGGTGCTGTGTTAGCAAACTCTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCC < SRR4302534.643734/94‑1 (MQ=60)
CAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCC < SRR4302534.643735/94‑1 (MQ=60)
AGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGATAGCTTTTGTTCGCTTGAGCAATATACGCCA > SRR4302534.5685359/1‑94 (MQ=60)
GGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAA < SRR4302534.4704876/94‑1 (MQ=60)
GTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGATCTTTTGTTCGCTTGAGCAATATACGCCAAG < SRR4302534.1696451/94‑1 (MQ=60)
TGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGG < SRR4302534.4989330/94‑1 (MQ=60)
GTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTA < SRR4302534.2280072/94‑1 (MQ=60)
TGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTAT < SRR4302534.4371363/94‑1 (MQ=60)
TGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTAT > SRR4302534.1815706/1‑94 (MQ=60)
GTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATT < SRR4302534.6508797/94‑1 (MQ=60)
TTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTT > SRR4302534.5495248/1‑94 (MQ=60)
TTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTT > SRR4302534.4447552/1‑94 (MQ=60)
TTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTT < SRR4302534.1506263/94‑1 (MQ=60)
TTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTT > SRR4302534.124661/1‑94 (MQ=60)
AGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCT > SRR4302534.4596119/1‑94 (MQ=60)
GCAAACACTTGTCGTCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTG < SRR4302534.3108170/94‑1 (MQ=60)
GCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTG < SRR4302534.4447145/94‑1 (MQ=60)
AAACACTTGTCGGCTGCTGTCAGTGGTGGCGCCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCG < SRR4302534.1948407/94‑1 (MQ=60)
AAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCG > SRR4302534.1648754/1‑94 (MQ=60)
AAACACGTGTCGGCTGCTGTCAGTGGTGGCTCCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCG < SRR4302534.6144469/94‑1 (MQ=60)
AACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGC > SRR4302534.795228/1‑94 (MQ=60)
ACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCT < SRR4302534.524381/94‑1 (MQ=60)
ACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCT < SRR4302534.2049234/94‑1 (MQ=60)
CACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTT < SRR4302534.5809460/94‑1 (MQ=60)
ACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTC > SRR4302534.3361677/1‑94 (MQ=60)
ACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTC > SRR4302534.2884724/1‑94 (MQ=60)
CTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCC < SRR4302534.922259/94‑1 (MQ=60)
CTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCC < SRR4302534.6422608/94‑1 (MQ=60)
CTTGTCGACTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCC < SRR4302534.2904339/94‑1 (MQ=60)
CGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGGA > SRR4302534.5487946/1‑94 (MQ=60)
CGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAA < SRR4302534.5413375/94‑1 (MQ=60)
CGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCACGAA > SRR4302534.3552367/1‑94 (MQ=60)
GGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAA > SRR4302534.171454/1‑94 (MQ=60)
CTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGT > SRR4302534.5086923/1‑94 (MQ=60)
TGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGTC > SRR4302534.4080550/1‑94 (MQ=60)
GCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGTCC > SRR4302534.5058081/1‑94 (MQ=60)
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CGTAGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGTCC > NC_000913/1584982‑1585168
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
