Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,605,226 |
G→A |
T68T (ACG→ACA) |
b1518 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,605,226 | 0 | G | A | 100.0%
| 752.9
/ NA
| 204 | T68T (ACG→ACA) | b1518 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (117/87); total (117/87) |
Only 100 of 209 total aligned reads displayed.
CGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGAGG > NC_000913/1605136‑1605315
|
cGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACAcc > 2:822309/1‑93 (MQ=255)
gATTTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACAccc < 1:4596290/93‑1 (MQ=255)
gATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACAccc > 1:229614/1‑93 (MQ=255)
aTGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACAcccc > 1:1182748/1‑93 (MQ=255)
aTGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACAcccc > 1:3855033/1‑93 (MQ=255)
tGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCa < 2:3232789/93‑1 (MQ=255)
tGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCa > 1:2519308/1‑93 (MQ=255)
gTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCag > 2:5901481/1‑92 (MQ=255)
gTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCAc < 2:282774/93‑1 (MQ=255)
tCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACt < 2:4157543/93‑1 (MQ=255)
tCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACt < 2:3546843/93‑1 (MQ=255)
tCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACt > 2:3143467/1‑93 (MQ=255)
ttACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCTTTCCATAAAACCACACCCCACTAc > 2:104255/1‑93 (MQ=255)
tACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACa > 2:1119484/1‑93 (MQ=255)
cAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACaaa < 2:3068950/93‑1 (MQ=255)
gACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAAcc > 1:2579316/1‑93 (MQ=255)
gACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAAcc < 1:4977744/93‑1 (MQ=255)
aCCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCt > 2:6412622/1‑93 (MQ=255)
aCCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCt > 1:553379/1‑93 (MQ=255)
ccGGAAGTGAATTCGTGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCtgt < 1:2254199/93‑1 (MQ=255)
cGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGATGACGCAGTGGCGTTCCATAAAATCACACCCCACTACAAAACCtgtg < 1:5180539/93‑1 (MQ=255)
cGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCtgtg < 2:2671799/93‑1 (MQ=255)
ggAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTgtgt < 2:4839038/93‑1 (MQ=255)
ggAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTgtgt > 1:3914403/1‑93 (MQ=255)
ggAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTgtgt < 1:3971647/93‑1 (MQ=255)
ggAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTgtgt > 1:2852578/1‑93 (MQ=255)
gAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTc < 2:2334772/93‑1 (MQ=255)
gAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTc < 1:3005888/93‑1 (MQ=255)
aGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTcgc < 1:6193163/93‑1 (MQ=255)
aGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTcgc > 2:4346438/1‑93 (MQ=255)
aGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTcgc > 2:6238576/1‑93 (MQ=255)
gTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTcgcg > 1:847135/1‑93 (MQ=255)
gAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGaa > 1:2723289/1‑93 (MQ=255)
tCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTg < 2:3928295/93‑1 (MQ=255)
cgcgCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTgg < 2:1948214/93‑1 (MQ=255)
gcgcTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGa > 2:2234108/1‑93 (MQ=255)
cgcTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGaa < 1:2680424/93‑1 (MQ=255)
cTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATc < 2:2127005/93‑1 (MQ=255)
tttATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCtt < 2:3854978/93‑1 (MQ=255)
tttATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCtt < 1:6047523/93‑1 (MQ=255)
tataTCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTa > 1:1299611/1‑93 (MQ=255)
tatCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAAt < 1:5366267/93‑1 (MQ=255)
tatCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAAt > 2:1196722/1‑93 (MQ=255)
tatCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAAt < 2:5337042/93‑1 (MQ=255)
tatCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAAt < 1:3525372/93‑1 (MQ=255)
atCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATg > 2:1849640/1‑93 (MQ=255)
cTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGAc > 1:5083393/1‑93 (MQ=255)
cTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGAc < 1:4134405/93‑1 (MQ=255)
tACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGAcc > 2:380704/1‑93 (MQ=255)
tACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGAcc > 1:1962016/1‑93 (MQ=255)
cGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCgg < 2:5140209/93‑1 (MQ=255)
gAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCggg > 2:3699414/1‑93 (MQ=255)
gAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCggg < 1:1824697/93‑1 (MQ=255)
aaGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGc < 2:4220384/93‑1 (MQ=255)
aaGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGc > 1:4341560/1‑93 (MQ=255)
aGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGcc < 1:3336370/93‑1 (MQ=255)
gCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCcg > 2:3593375/1‑93 (MQ=255)
cTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCcgcg > 2:1834083/1‑93 (MQ=255)
tataAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGt > 1:4925961/1‑93 (MQ=255)
ataAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTa > 2:4776461/1‑93 (MQ=255)
taAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaa < 2:4587932/93‑1 (MQ=255)
taAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaa > 2:5472357/1‑93 (MQ=255)
aaGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaa > 2:3762607/1‑93 (MQ=255)
aaGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaa > 1:316364/1‑93 (MQ=255)
aGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaaa > 2:814792/1‑93 (MQ=255)
aGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaaa > 2:2558952/1‑93 (MQ=255)
aGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaaa > 1:4974456/1‑93 (MQ=255)
aGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaaa > 1:2075766/1‑93 (MQ=255)
aTGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAAc < 1:2966436/93‑1 (MQ=255)
aaGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTc < 1:5063033/93‑1 (MQ=255)
aGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCt > 2:55392/1‑93 (MQ=255)
aGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCt > 1:1687501/1‑93 (MQ=255)
aGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCt < 1:1387904/93‑1 (MQ=255)
gACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTg > 2:1102326/1‑93 (MQ=255)
gACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTg > 1:997628/1‑93 (MQ=255)
gCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTc > 2:3673010/1‑93 (MQ=255)
gCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTc > 1:3347042/1‑93 (MQ=255)
aGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCaa < 1:676413/93‑1 (MQ=255)
gTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAAt > 2:5649238/1‑93 (MQ=255)
gTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAAt > 1:5437786/1‑93 (MQ=255)
tGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATg < 2:1275984/93‑1 (MQ=255)
ggCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATgg < 1:4890712/93‑1 (MQ=255)
cGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGtt > 1:2480717/1‑93 (MQ=255)
cGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGtt < 1:3065015/93‑1 (MQ=255)
gTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGttt > 2:3963208/1‑93 (MQ=255)
ttCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTg > 1:1507489/1‑93 (MQ=255)
ttCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTg > 1:290549/1‑93 (MQ=255)
ccATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGAt < 1:1021431/93‑1 (MQ=255)
ccATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGAt > 1:4812727/1‑93 (MQ=255)
cATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATg > 1:5695506/1‑93 (MQ=255)
aTAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGc < 2:2453546/93‑1 (MQ=255)
aTAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGc < 2:3168642/93‑1 (MQ=255)
tAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGcc < 1:3810136/93‑1 (MQ=255)
tAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGcc < 2:776987/93‑1 (MQ=255)
tAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGcc < 1:1659347/93‑1 (MQ=255)
tAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGcc < 2:3304863/93‑1 (MQ=255)
aaaaaCCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGcc < 2:4950701/92‑1 (MQ=255)
aaaaCCACACCCCACTACAAAGCCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTGTGATGCCg < 1:6310434/93‑1 (MQ=255)
aaaaCCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCg < 2:1667329/93‑1 (MQ=255)
aaCCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTg > 1:6147290/1‑93 (MQ=255)
|
CGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGAGG > NC_000913/1605136‑1605315
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTCGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGA > NC_000913/1605133‑1605318
|
CTTCGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACA > SRR4302534.5943623/1‑94 (MQ=60)
TTCGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACAC > SRR4302534.6054417/1‑94 (MQ=60)
TCGATGTCTTACAGGACCTGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACC < SRR4302534.2947628/94‑1 (MQ=60)
TCGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACC < SRR4302534.5214507/94‑1 (MQ=60)
CGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCC > SRR4302534.318976/1‑94 (MQ=60)
CGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCC > SRR4302534.235614/1‑94 (MQ=60)
CGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCC > SRR4302534.5049966/1‑94 (MQ=60)
GATTTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCC < SRR4302534.4721030/94‑1 (MQ=60)
GATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCC > SRR4302534.3958531/1‑94 (MQ=60)
GATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCC > SRR4302534.1213831/1‑94 (MQ=60)
GATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCC > SRR4302534.3362056/1‑94 (MQ=60)
ATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCA > SRR4302534.6278531/1‑94 (MQ=60)
ATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCA > SRR4302534.2586194/1‑94 (MQ=60)
GTGTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACT < SRR4302534.3077066/94‑1 (MQ=60)
GTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACT > SRR4302534.2554781/1‑94 (MQ=60)
CTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTAC > SRR4302534.398953/1‑94 (MQ=60)
TACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAA > SRR4302534.2422472/1‑94 (MQ=60)
ACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAA < SRR4302534.4575024/94‑1 (MQ=60)
CAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAA > SRR4302534.1437664/1‑94 (MQ=60)
GGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACC > SRR4302534.2647633/1‑94 (MQ=60)
GGACCCGGAAGGGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACC > SRR4302534.5098900/1‑94 (MQ=60)
GACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCT < SRR4302534.5112481/94‑1 (MQ=60)
GACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCT > SRR4302534.567020/1‑94 (MQ=60)
CCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGT > SRR4302534.3922143/1‑94 (MQ=60)
CCGGAAGTGAATTCGTGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTG < SRR4302534.2313955/94‑1 (MQ=60)
CGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGATGACGCAGTGGCGTTCCATAAAATCACACCCCACTACAAAACCTGTGT < SRR4302534.5320146/94‑1 (MQ=60)
CGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGT > SRR4302534.4019354/1‑94 (MQ=60)
CGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGT > SRR4302534.2927511/1‑94 (MQ=60)
GGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTC < SRR4302534.4077950/94‑1 (MQ=60)
GAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCG < SRR4302534.2793928/94‑1 (MQ=60)
GAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCG < SRR4302534.3084526/94‑1 (MQ=60)
AAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGC < SRR4302534.5401353/94‑1 (MQ=60)
AGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCG > SRR4302534.1393983/1‑94 (MQ=60)
AGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCG < SRR4302534.6361667/94‑1 (MQ=60)
AGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCG > SRR4302534.868489/1‑94 (MQ=60)
TGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAA > SRR4302534.2795143/1‑94 (MQ=60)
TGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAA > SRR4302534.2960385/1‑94 (MQ=60)
AATTCGCGCTGTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAAC < SRR4302534.891673/94‑1 (MQ=60)
ATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACT < SRR4302534.3352255/94‑1 (MQ=60)
TCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGG > SRR4302534.4960631/1‑94 (MQ=60)
GCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAA > SRR4302534.5218665/1‑94 (MQ=60)
CGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAAT < SRR4302534.2751274/94‑1 (MQ=60)
GCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATC > SRR4302534.3848284/1‑94 (MQ=60)
CTTTTATATCTACGAAGCCTATAAAGATGAAGACTCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCT > SRR4302534.856359/1‑94 (MQ=60)
TTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTT < SRR4302534.1873739/94‑1 (MQ=60)
TTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTT < SRR4302534.1174717/94‑1 (MQ=60)
TTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTT < SRR4302534.6211909/94‑1 (MQ=60)
TTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTA > SRR4302534.1333880/1‑94 (MQ=60)
TATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAA > SRR4302534.1642827/1‑94 (MQ=60)
ATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAAT > SRR4302534.3429326/1‑94 (MQ=60)
TATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATG < SRR4302534.3620198/94‑1 (MQ=60)
TATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATG < SRR4302534.5510899/94‑1 (MQ=60)
TCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGAC > SRR4302534.5220597/1‑94 (MQ=60)
CTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACC < SRR4302534.4245919/94‑1 (MQ=60)
CTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACC > SRR4302534.2013367/1‑94 (MQ=60)
TACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCG > SRR4302534.6415082/1‑94 (MQ=60)
CGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGG > SRR4302534.1748265/1‑94 (MQ=60)
GAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGC < SRR4302534.1872152/94‑1 (MQ=60)
GAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGC > SRR4302534.4458855/1‑94 (MQ=60)
AAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCC > SRR4302534.523859/1‑94 (MQ=60)
AAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCC > SRR4302534.2080191/1‑94 (MQ=60)
AGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCG > SRR4302534.2340715/1‑94 (MQ=60)
AGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCG < SRR4302534.3425631/94‑1 (MQ=60)
GCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGC < SRR4302534.5945304/94‑1 (MQ=60)
CCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCG < SRR4302534.4972944/94‑1 (MQ=60)
CCTATAAAGATGAAGACGCAGTGGAGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCG > SRR4302534.1706795/1‑94 (MQ=60)
CTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT > SRR4302534.5059476/1‑94 (MQ=60)
ATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAA > SRR4302534.3485393/1‑94 (MQ=60)
ATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCACACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAA > SRR4302534.2677347/1‑94 (MQ=60)
TAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAA > SRR4302534.3038186/1‑94 (MQ=60)
TAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAA < SRR4302534.1300469/94‑1 (MQ=60)
AAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAA < SRR4302534.5936558/94‑1 (MQ=60)
AAAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAA > SRR4302534.324511/1‑94 (MQ=60)
AAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAA > SRR4302534.5168977/1‑94 (MQ=60)
AAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAA < SRR4302534.5808673/94‑1 (MQ=60)
AAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAA > SRR4302534.5109116/1‑94 (MQ=60)
AAGATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAA > SRR4302534.2130114/1‑94 (MQ=60)
ATGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACG < SRR4302534.3044122/94‑1 (MQ=60)
TGAAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGT > SRR4302534.2587895/1‑94 (MQ=60)
AAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCT < SRR4302534.5199749/94‑1 (MQ=60)
AAGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCT > SRR4302534.1731383/1‑94 (MQ=60)
AGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTG < SRR4302534.1424433/94‑1 (MQ=60)
AGACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTG > SRR4302534.1023195/1‑94 (MQ=60)
GACGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGT < SRR4302534.4021878/94‑1 (MQ=60)
CGCAGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTC > SRR4302534.3436647/1‑94 (MQ=60)
AGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAAT < SRR4302534.692913/94‑1 (MQ=60)
AGTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAAT > SRR4302534.5584236/1‑94 (MQ=60)
GTGGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATG < SRR4302534.6563267/94‑1 (MQ=60)
GGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGT < SRR4302534.5023323/94‑1 (MQ=60)
GGCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGT < SRR4302534.427945/94‑1 (MQ=60)
GCGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTT > SRR4302534.2546606/1‑94 (MQ=60)
CGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTT > SRR4302534.4126536/1‑94 (MQ=60)
CGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTT > SRR4302534.5546076/1‑94 (MQ=60)
CGTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTT < SRR4302534.3145468/94‑1 (MQ=60)
GTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTG > SRR4302534.298060/1‑94 (MQ=60)
GTTCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTG > SRR4302534.1547140/1‑94 (MQ=60)
TCCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGAT > SRR4302534.4943382/1‑94 (MQ=60)
CCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATG < SRR4302534.1047733/94‑1 (MQ=60)
CCATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATG > SRR4302534.5849795/1‑94 (MQ=60)
ATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCC < SRR4302534.5619494/94‑1 (MQ=60)
ATAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCC > SRR4302534.3138952/1‑94 (MQ=60)
TAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCG < SRR4302534.3912443/94‑1 (MQ=60)
TAAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCG < SRR4302534.1702571/94‑1 (MQ=60)
AAAACCACACCCCACTACAAATCCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGT < SRR4302534.2848302/94‑1 (MQ=60)
AAAACCACACCCCACTACAAAGCCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTGTGATGCCGT < SRR4302534.6481036/94‑1 (MQ=60)
AAAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGT < SRR4302534.2212408/94‑1 (MQ=60)
AAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTG > SRR4302534.6314478/1‑94 (MQ=60)
AAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTG < SRR4302534.4764408/94‑1 (MQ=60)
AAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTG < SRR4302534.5111330/94‑1 (MQ=60)
AAACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTG > SRR4302534.6314477/1‑94 (MQ=60)
AACCACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGA < SRR4302534.2426116/94‑1 (MQ=60)
ACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCG < SRR4302534.3006198/94‑1 (MQ=60)
ACACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCG > SRR4302534.5874384/1‑94 (MQ=60)
CACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGGCCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGA < SRR4302534.114989/94‑1 (MQ=60)
CACCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGA < SRR4302534.5163168/94‑1 (MQ=60)
|
CTTCGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGA > NC_000913/1605133‑1605318
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
