Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,636,465 |
T→C |
intergenic (‑296/+14) |
b1551 ← / ← cspI |
hypothetical protein/cold shock‑like protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,636,465 | 0 | T | C | 99.4%
| 581.9
/ ‑4.4
| 167 | intergenic (‑296/+14) | b1551/cspI | hypothetical protein/cold shock‑like protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (90/76); total (90/77) |
| Fisher's exact test for biased strand distribution p-value = 4.61e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.29e-01 |
Only 100 of 169 total aligned reads displayed.
CCCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGTAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCTCA > NC_000913/1636375‑1636554
|
ccccGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCaa > 1:1803757/1‑93 (MQ=255)
ccccGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCaa < 2:5084230/93‑1 (MQ=255)
ccccGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCaa > 2:1240384/1‑93 (MQ=255)
cccGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAat > 1:3876678/1‑93 (MQ=255)
cccGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAat > 1:3709377/1‑93 (MQ=255)
ccGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAata > 2:6110537/1‑93 (MQ=255)
cGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAatat > 2:1676529/1‑93 (MQ=255)
cGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAatat > 2:4418947/1‑93 (MQ=255)
aaaGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTg > 1:3374768/1‑93 (MQ=255)
aaaGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTg > 1:4116316/1‑93 (MQ=255)
aaaGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTg > 1:1345134/1‑93 (MQ=255)
aGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTc < 2:5749326/93‑1 (MQ=255)
ggATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCt < 2:6236194/93‑1 (MQ=255)
ggATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCt < 1:5302112/93‑1 (MQ=255)
ggATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCt < 1:6181011/93‑1 (MQ=255)
ggATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCt < 2:103652/93‑1 (MQ=255)
gATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTa > 1:4385338/1‑93 (MQ=255)
aTTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTAc > 1:3766733/1‑93 (MQ=255)
ttCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTAcc < 2:3764899/93‑1 (MQ=255)
tCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCt > 1:4062583/1‑93 (MQ=255)
tCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCt > 2:1631966/1‑93 (MQ=255)
cATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTc > 1:2687859/1‑93 (MQ=255)
gTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCaaa < 1:5410952/93‑1 (MQ=255)
gTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCaaa > 1:5474701/1‑93 (MQ=255)
tCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAg < 2:478352/93‑1 (MQ=255)
aGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAgcg > 2:682546/1‑93 (MQ=255)
gAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAgcgc > 2:4134611/1‑93 (MQ=255)
gAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAgcgc > 1:2815441/1‑93 (MQ=255)
aCATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCAc > 1:2037049/1‑93 (MQ=255)
aCATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCAc > 2:31966/1‑93 (MQ=255)
aCATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCAc < 2:3297382/93‑1 (MQ=255)
aCATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCAc > 1:3354649/1‑93 (MQ=255)
aCATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCAc < 1:3048536/93‑1 (MQ=255)
cATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACt < 2:1267566/93‑1 (MQ=255)
aTCAAAAGATGATGTTCTATACTGGGAACCATGATAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTa > 2:1077684/1‑93 (MQ=255)
aTCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTa > 1:4208301/1‑93 (MQ=255)
cAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACa < 1:2482790/93‑1 (MQ=255)
aaaaGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTGCCTCAAAGCGACACTACAt < 1:6319786/93‑1 (MQ=255)
aaaGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATg > 2:3059402/1‑93 (MQ=255)
aaGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGa > 1:4287910/1‑93 (MQ=255)
aaGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGa > 1:5290195/1‑93 (MQ=255)
aaGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGa > 1:2463745/1‑93 (MQ=255)
aGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGaa < 1:2325631/93‑1 (MQ=255)
aGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGaa > 1:6459377/1‑93 (MQ=255)
aGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGaa > 2:5348271/1‑93 (MQ=255)
gatgatGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGaaa > 1:100043/1‑92 (MQ=255)
gatgatGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAAc > 1:595796/1‑93 (MQ=255)
atgatgTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACa < 1:4810781/93‑1 (MQ=255)
gatgTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAgg > 2:2042491/1‑92 (MQ=255)
ttCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCa > 2:5457526/1‑93 (MQ=255)
tCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAg < 1:5000839/93‑1 (MQ=255)
tCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAg < 2:2654568/93‑1 (MQ=255)
tataCTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGa > 1:2685660/1‑93 (MQ=255)
tataCTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGa > 1:3560500/1‑93 (MQ=255)
tataCTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGa > 2:4437165/1‑93 (MQ=255)
tataCTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGa > 1:485767/1‑93 (MQ=255)
taCTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGAcc > 2:893544/1‑93 (MQ=255)
tGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCttt > 2:6359328/1‑93 (MQ=255)
gggAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTa > 1:696090/1‑93 (MQ=255)
ggAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAg < 1:871910/93‑1 (MQ=255)
ggAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAg > 1:1716775/1‑93 (MQ=255)
ggAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAg > 1:3117707/1‑93 (MQ=255)
ggAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAg > 1:4502600/1‑93 (MQ=255)
gAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCCTTAgg > 1:3886881/1‑93 (MQ=255)
aaCCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGt < 2:4797264/93‑1 (MQ=255)
aaCCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGt < 2:413090/93‑1 (MQ=255)
aaCCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGt < 2:3720/93‑1 (MQ=255)
aCCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAGCAGCGGCAGGACCTTTAGGTc < 2:1189252/93‑1 (MQ=255)
ccATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGGCCTTTAAGTcc > 1:6389717/1‑93 (MQ=255)
cATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGAGCTTTAGGTCCg > 2:3871710/1‑93 (MQ=255)
aTGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGt < 2:1594187/93‑1 (MQ=255)
acaacaCGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCCTTAGGTCCGGtct > 2:393843/1‑93 (MQ=255)
acacGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCaa > 1:3220726/1‑93 (MQ=255)
acGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATa > 2:2466969/1‑93 (MQ=255)
gggCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCCATAcc > 1:2547021/1‑93 (MQ=255)
gggCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATAcc > 1:1050764/1‑93 (MQ=255)
ggCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCa > 1:5527000/1‑93 (MQ=255)
gCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCaa < 2:295220/93‑1 (MQ=255)
aTCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAAt > 1:1632931/1‑93 (MQ=255)
cTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTc < 2:1999403/93‑1 (MQ=255)
cTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCCTTAGGTCCGGTCTCCATACCAAATTc > 1:3319002/1‑93 (MQ=255)
aaaGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCaa < 2:3998793/93‑1 (MQ=255)
aaGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAAc < 2:1886082/93‑1 (MQ=255)
aGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACt < 2:4417408/93‑1 (MQ=255)
aGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACt > 2:4705687/1‑93 (MQ=255)
gTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACtt < 2:2305135/93‑1 (MQ=255)
gTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACtt < 2:1469125/93‑1 (MQ=255)
tGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTc < 2:389709/93‑1 (MQ=255)
tGAATATGCTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTc < 1:2383822/93‑1 (MQ=255)
aaTATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCt < 2:2787035/93‑1 (MQ=255)
aaTATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCt < 1:3615113/93‑1 (MQ=255)
aaTATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCt < 2:4300101/93‑1 (MQ=255)
aaTATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCCTTAGGTCCGTTCTCAATAACAAATTCAACTTCCt > 2:6199693/1‑93 (MQ=255)
atatGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTg > 1:4701899/1‑93 (MQ=255)
tatGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTgt > 2:5329317/1‑92 (MQ=255)
agTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATtc < 2:2572004/92‑1 (MQ=255)
gTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGGCCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATtct > 2:3492541/1‑93 (MQ=255)
tttGCAATATTGTCTACCTCAAAGCGCCACTACATGACCACCGGCAGGACCTTTAGGCCCGTTTTCAATACCAAATTCAACTTCCTGATtccc > 2:2880225/1‑91 (MQ=255)
tttGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATtctc < 1:4831857/93‑1 (MQ=255)
ttGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCTCa < 1:6365598/93‑1 (MQ=255)
|
CCCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGTAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCTCA > NC_000913/1636375‑1636554
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGCCCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGTAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCTCAGTTA > NC_000913/1636372‑1636558
|
TTGCCCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGC < SRR4302534.386418/94‑1 (MQ=60)
TTGCCCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGC < SRR4302534.2082866/94‑1 (MQ=60)
TGCCCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCA > SRR4302534.3071788/1‑94 (MQ=60)
GCCCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAA < SRR4302534.2736083/94‑1 (MQ=60)
GCCCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAA > SRR4302534.1850599/1‑94 (MQ=60)
CCCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAAT > SRR4302534.3809093/1‑94 (MQ=60)
CCCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAAT > SRR4302534.3980761/1‑94 (MQ=60)
CCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATA > SRR4302534.5527519/1‑94 (MQ=60)
GAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTG > SRR4302534.3465205/1‑94 (MQ=60)
GAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTG > SRR4302534.4227068/1‑94 (MQ=60)
GAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTG > SRR4302534.1380597/1‑94 (MQ=60)
AGGATGCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCT < SRR4302534.4146239/94‑1 (MQ=60)
GGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTA > SRR4302534.4503569/1‑94 (MQ=60)
GGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTA < SRR4302534.5445180/94‑1 (MQ=60)
GGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTA < SRR4302534.6349234/94‑1 (MQ=60)
GATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTAC > SRR4302534.3867857/1‑94 (MQ=60)
TTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCT > SRR4302534.4171572/1‑94 (MQ=60)
TCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTC > SRR4302534.3127113/1‑94 (MQ=60)
TCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTC > SRR4302534.2758894/1‑94 (MQ=60)
TGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAA > SRR4302534.5622317/1‑94 (MQ=60)
GTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAG < SRR4302534.5556526/94‑1 (MQ=60)
CAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCG < SRR4302534.848268/94‑1 (MQ=60)
AGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGC > SRR4302534.2889467/1‑94 (MQ=60)
AGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGC > SRR4302534.894322/1‑94 (MQ=60)
AACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCAC > SRR4302534.2090315/1‑94 (MQ=60)
AACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCAC > SRR4302534.3444489/1‑94 (MQ=60)
ACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACT < SRR4302534.3128513/94‑1 (MQ=60)
CATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTA > SRR4302534.4953127/1‑94 (MQ=60)
CATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTA > SRR4302534.4321870/1‑94 (MQ=60)
ATCAAAAGATGATGTTCTATACTGGGAACCATGAGAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTAC > SRR4302534.3659091/1‑94 (MQ=60)
CAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACAT < SRR4302534.2548723/94‑1 (MQ=60)
AAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTGCCTCAAAGCGACACTACATG < SRR4302534.6490567/94‑1 (MQ=60)
AAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTGAAAGCGCCACTACATGA < SRR4302534.4940290/94‑1 (MQ=60)
AAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGA > SRR4302534.5432989/1‑94 (MQ=60)
AAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGA > SRR4302534.2529201/1‑94 (MQ=60)
AAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGA > SRR4302534.4404076/1‑94 (MQ=60)
AAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAA > SRR4302534.5608363/1‑94 (MQ=60)
AAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAA > SRR4302534.6633381/1‑94 (MQ=60)
AGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAAC > SRR4302534.1797989/1‑94 (MQ=60)
AGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAAC > SRR4302534.610333/1‑94 (MQ=60)
AGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAAC < SRR4302534.2387340/94‑1 (MQ=60)
AGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAAA > SRR4302534.102716/1‑94 (MQ=60)
ATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAG < SRR4302534.4941379/94‑1 (MQ=60)
agtgCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCATTACATGAACAGCGGC < SRR4302534.258560/90‑1 (MQ=60)
GTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCA < SRR4302534.3174488/94‑1 (MQ=60)
TCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGG < SRR4302534.5136040/94‑1 (MQ=60)
CTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGA > SRR4302534.497926/1‑94 (MQ=60)
CTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGA > SRR4302534.2756643/1‑94 (MQ=60)
CTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGA > SRR4302534.3656291/1‑94 (MQ=60)
CTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTT < SRR4302534.6366329/94‑1 (MQ=60)
TGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTA < SRR4302534.5124773/94‑1 (MQ=60)
TGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTA > SRR4302534.713136/1‑94 (MQ=60)
GGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAG > SRR4302534.1761370/1‑94 (MQ=60)
GGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAG > SRR4302534.3199685/1‑94 (MQ=60)
GGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAG > SRR4302534.4624467/1‑94 (MQ=60)
GGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGG < SRR4302534.893939/94‑1 (MQ=60)
GGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCCTTAGG > SRR4302534.3991220/1‑94 (MQ=60)
ACCATGACAGCACGGGCATCTATAGTGATTCTGGTTTGCCGTATTGTCTAACTCAAAGCGCCGCAACATGAACAGCGGCAGGACCTTTAGGTCC < SRR4302534.6641438/94‑1 (MQ=42)
ACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGGCCTTTAAGTCC > SRR4302534.6562300/1‑94 (MQ=60)
ACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGgca < SRR4302534.6545898/94‑4 (MQ=60)
ACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCC < SRR4302534.1910747/94‑1 (MQ=60)
ACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCC < SRR4302534.364592/94‑1 (MQ=60)
CCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCG < SRR4302534.4607092/94‑1 (MQ=60)
CCATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCG < SRR4302534.5694402/94‑1 (MQ=60)
ATGACAACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTT < SRR4302534.5396784/94‑1 (MQ=60)
AACACGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAA > SRR4302534.3306241/1‑94 (MQ=60)
CGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCCATACC > SRR4302534.2614556/1‑94 (MQ=60)
CGGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACC > SRR4302534.1077972/1‑94 (MQ=60)
GGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCA > SRR4302534.5676163/1‑94 (MQ=60)
GGGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCA < SRR4302534.4429298/94‑1 (MQ=60)
GGCATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAA > SRR4302534.6564292/1‑94 (MQ=60)
CATCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAAT > SRR4302534.1675500/1‑94 (MQ=60)
TCTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCCTTAGGTCCGGTCTCCATACCAAATTC > SRR4302534.3407740/1‑94 (MQ=60)
CTAAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCA < SRR4302534.1347420/94‑1 (MQ=60)
AAAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAAC > SRR4302534.4280194/1‑94 (MQ=60)
AAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACT > SRR4302534.2790093/1‑94 (MQ=60)
AAGTGAATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACT < SRR4302534.3948158/94‑1 (MQ=60)
TGAATATGCTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCC < SRR4302534.2447163/94‑1 (MQ=60)
AATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTG < SRR4302534.3712318/94‑1 (MQ=60)
AATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTG < SRR4302534.3838961/94‑1 (MQ=60)
AATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTG > SRR4302534.4829544/1‑94 (MQ=60)
AATATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTG > SRR4302534.4221022/1‑94 (MQ=60)
ATGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATT < SRR4302534.3361331/94‑1 (MQ=60)
TGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTC > SRR4302534.1545839/1‑94 (MQ=60)
TGGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTC < SRR4302534.2408063/94‑1 (MQ=60)
GGTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCT < SRR4302534.248649/94‑1 (MQ=60)
GTTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCTC > SRR4302534.3443481/1‑94 (MQ=60)
TTTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCTCA < SRR4302534.4962945/94‑1 (MQ=60)
TTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCTCAG < SRR4302534.6164495/94‑1 (MQ=60)
TTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCTCAG < SRR4302534.6537492/94‑1 (MQ=60)
TTGCAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCTCAG < SRR4302534.2660077/94‑1 (MQ=60)
CAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCTCAGTTA < SRR4302534.504096/94‑1 (MQ=60)
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TTGCCCCGAAAGGATTCATGTCAGAAACATCAAAAGATGATGTTCTATACTGGGAACCATGACAACACGGGCATCTAAAGTGAATATGGTTTGTAATATTGTCTACCTCAAAGCGCCACTACATGAACAGCGGCAGGACCTTTAGGTCCGTTCTCAATACCAAATTCAACTTCCTGATTCTCAGTTA > NC_000913/1636372‑1636558
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
