Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,668,733 |
A→G |
S337S (TCA→TCG) |
ynfM → |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,668,733 | 0 | A | G | 100.0%
| 764.2
/ NA
| 219 | S337S (TCA→TCG) | ynfM | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (113/106); total (113/106) |
Only 100 of 229 total aligned reads displayed.
GTTGTTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCAGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCT > NC_000913/1668643‑1668822
|
ttgttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTcggca > 2:5459309/1‑93 (MQ=255)
ttgttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTcggca < 2:3667195/93‑1 (MQ=255)
gttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTTGGCAgg > 1:4105299/1‑93 (MQ=255)
gttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAgg > 2:3365754/1‑93 (MQ=255)
tCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttc < 2:5189093/93‑1 (MQ=255)
aCGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttcttc < 2:5018295/93‑1 (MQ=255)
aCGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttcttc < 1:2309938/93‑1 (MQ=255)
aCGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttcttc < 1:2165497/93‑1 (MQ=255)
gggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGc > 1:4164615/1‑93 (MQ=255)
gggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGc > 2:1237670/1‑93 (MQ=255)
gggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGc < 2:4195629/93‑1 (MQ=255)
gggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGc < 2:3248146/93‑1 (MQ=255)
ggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCa > 1:1824602/1‑93 (MQ=255)
ggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGc < 2:241682/93‑1 (MQ=255)
ggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGc < 2:5779249/93‑1 (MQ=255)
tATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCa > 1:4606743/1‑93 (MQ=255)
aTGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCAc > 2:5593573/1‑93 (MQ=255)
tGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACt > 2:2658031/1‑93 (MQ=255)
gCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTc < 1:705635/93‑1 (MQ=255)
gCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTc < 1:6478965/93‑1 (MQ=255)
gCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGATACTCTTCTCCGCAGGATTCTTCGGCGCTCACTc > 1:4769605/1‑93 (MQ=255)
cTGTTTGGTTTACTTATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCa < 2:1560768/93‑1 (MQ=255)
tGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAg < 2:4399092/93‑1 (MQ=255)
tGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAg < 1:3774865/93‑1 (MQ=255)
tGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAg > 2:4859089/1‑93 (MQ=255)
tGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAg < 1:4665810/93‑1 (MQ=255)
gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTTCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGACCTCTCAGt > 1:3365735/1‑93 (MQ=255)
gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGt > 1:5021615/1‑93 (MQ=255)
gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGt < 1:3404591/93‑1 (MQ=255)
gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGt < 2:1311409/93‑1 (MQ=255)
gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGt > 2:2450465/1‑93 (MQ=255)
tttGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTa < 2:88442/93‑1 (MQ=255)
ttGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAg < 2:1506172/93‑1 (MQ=255)
tgTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGcc < 1:5548366/92‑1 (MQ=255)
ggTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGcc > 2:1767513/1‑93 (MQ=255)
gTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCca < 1:100404/93‑1 (MQ=255)
gTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCca > 2:755485/1‑93 (MQ=255)
gTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCca < 2:5146575/93‑1 (MQ=255)
tttACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCcag < 1:1473116/93‑1 (MQ=255)
ttACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCcagc < 2:2954517/93‑1 (MQ=255)
cTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCagcagc < 2:3929469/93‑1 (MQ=255)
gatgaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTg < 1:1108225/93‑1 (MQ=255)
atgaCCTTATTCAGCTCTCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTgg < 1:1904557/93‑1 (MQ=255)
tgaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGa > 2:526877/1‑93 (MQ=255)
gaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGAt > 1:5190516/1‑93 (MQ=255)
gaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGAt < 1:5036541/93‑1 (MQ=255)
ccTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCg < 1:2634478/93‑1 (MQ=255)
cTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCACACTCAGTAGCCAGCAGCTGGATCgg > 1:844990/1‑93 (MQ=255)
cTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTAGCAGCCCACTCAGTAGCCAGCAGCCGGATCgg > 2:2815598/1‑93 (MQ=255)
tCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGccccc < 2:6275457/93‑1 (MQ=255)
cAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCcg > 1:5171324/1‑93 (MQ=255)
aGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCcgc > 2:2675490/1‑93 (MQ=255)
gCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCcgcg < 1:3713081/93‑1 (MQ=255)
gCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCcgcg > 2:2997907/1‑93 (MQ=255)
gCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCcgcg > 1:5898647/1‑93 (MQ=255)
gCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGACCACTCAGTAGCCAGCAGCTGGATCGGCCCCcgcg > 1:2095587/1‑93 (MQ=255)
cTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCaaaa < 1:4433836/93‑1 (MQ=255)
cTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCaaaa > 1:2599411/1‑93 (MQ=255)
cTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCaaaa < 2:4702899/93‑1 (MQ=255)
gtgGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCCAAAcg > 1:5456924/1‑93 (MQ=255)
gtgGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCCCGCCAAAcg > 2:619170/1‑93 (MQ=255)
tgGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAAcgc < 1:5351218/93‑1 (MQ=255)
ggCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAAcgcg > 2:80686/1‑93 (MQ=255)
gCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACgcgc < 1:2979342/93‑1 (MQ=255)
gCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACgcgc > 2:6406319/1‑93 (MQ=255)
tGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAACACGCGCTa > 2:2779199/1‑93 (MQ=255)
tGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTa > 2:542239/1‑93 (MQ=255)
aTCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTaaa < 1:2891638/93‑1 (MQ=255)
tCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAag < 2:6332058/93‑1 (MQ=255)
cTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAagg < 2:2298387/93‑1 (MQ=255)
cTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAagg > 2:3087782/1‑93 (MQ=255)
tttGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggc < 1:2066186/93‑1 (MQ=255)
tttGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggc > 1:165502/1‑93 (MQ=255)
ttGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggcc < 1:2260033/93‑1 (MQ=255)
ttGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggcc < 2:2118438/93‑1 (MQ=255)
tGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggcca < 1:3252303/93‑1 (MQ=255)
tGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCCCGCAAAACGCGCTAAaggcca > 1:549169/1‑93 (MQ=255)
gCCGGAATGTTGCTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAagtccag < 1:2783201/93‑1 (MQ=255)
gCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggccag < 2:529269/93‑1 (MQ=255)
gCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggccag < 1:1131747/93‑1 (MQ=255)
cGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggccaggc < 1:531500/93‑1 (MQ=255)
ggAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggccaggcc > 1:1601468/1‑93 (MQ=255)
gAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGcct > 2:4464923/1‑93 (MQ=255)
aTGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGcctcc > 1:1939157/1‑93 (MQ=255)
tGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGcctccc > 2:1117706/1‑92 (MQ=255)
gTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCctcctc > 1:5979616/1‑93 (MQ=255)
tACTCTTCTCGGCAGGATTCTTCGCAGCCCAGTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGc < 2:2701646/93‑1 (MQ=255)
tACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGc < 2:5924336/93‑1 (MQ=255)
tACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGc > 1:2288470/1‑93 (MQ=255)
tACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGc < 1:5799782/93‑1 (MQ=255)
aCTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCt < 1:3050043/93‑1 (MQ=255)
tcttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGt < 1:1520381/93‑1 (MQ=255)
cttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTa > 1:1461058/1‑93 (MQ=255)
cttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTa > 2:4565688/1‑93 (MQ=255)
ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt > 1:1238646/1‑93 (MQ=255)
ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt < 2:5995196/93‑1 (MQ=255)
ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt > 2:354746/1‑93 (MQ=255)
ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt > 1:3141372/1‑93 (MQ=255)
ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt < 2:2211739/93‑1 (MQ=255)
ctcGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCt < 1:6089551/93‑1 (MQ=255)
|
GTTGTTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCAGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCT > NC_000913/1668643‑1668822
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCAGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCTGTTC > NC_000913/1668645‑1668826
|
TGTTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTTGGCAGG > SRR4302534.4215715/1‑94 (MQ=60)
TTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAT > SRR4302534.5160997/1‑94 (MQ=60)
GACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGGTTCTTC > SRR4302534.1150063/1‑94 (MQ=60)
GACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTC < SRR4302534.5313346/94‑1 (MQ=60)
ACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCG > SRR4302534.2856653/1‑94 (MQ=60)
ACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCG < SRR4302534.2222695/94‑1 (MQ=60)
ACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCG < SRR4302534.2371247/94‑1 (MQ=60)
CGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGC > SRR4302534.2146245/1‑94 (MQ=60)
CGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGC < SRR4302534.6476058/94‑1 (MQ=60)
CGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGC > SRR4302534.4277104/1‑94 (MQ=60)
GGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCA > SRR4302534.1872051/1‑94 (MQ=60)
GTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCC > SRR4302534.2618599/1‑94 (MQ=60)
TTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCA > SRR4302534.4731751/1‑94 (MQ=60)
ATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACT > SRR4302534.1428536/1‑94 (MQ=60)
ATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACT > SRR4302534.5132531/1‑94 (MQ=60)
ATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAATCTTCGCAGCACACT > SRR4302534.2179265/1‑94 (MQ=60)
TGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGATACTCTTCTCCGCAGGATTCTTCGgcgctcactc > SRR4302534.4899103/1‑84 (MQ=60)
GCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCA > SRR4302534.1625445/1‑94 (MQ=60)
GCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCA < SRR4302534.6653586/94‑1 (MQ=60)
GCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCA < SRR4302534.722951/94‑1 (MQ=60)
CTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAG > SRR4302534.4787227/1‑94 (MQ=60)
CTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAG < SRR4302534.1996539/94‑1 (MQ=60)
TGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTTCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGACCTCTCAGT > SRR4302534.3455896/1‑94 (MQ=60)
TGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCCGT > SRR4302534.1389383/1‑94 (MQ=60)
TGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGT < SRR4302534.3876214/94‑1 (MQ=60)
TGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGT < SRR4302534.4792481/94‑1 (MQ=60)
TGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGT > SRR4302534.5157279/1‑94 (MQ=60)
TGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGT > SRR4302534.3332153/1‑94 (MQ=60)
GTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTA < SRR4302534.3496021/94‑1 (MQ=60)
TTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTAGGCAGGATTCTTCGCAGCCCACTCAGTAGC > SRR4302534.1506428/1‑94 (MQ=60)
TGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCC > SRR4302534.4549836/1‑94 (MQ=60)
TGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCA < SRR4302534.5698125/94‑1 (MQ=60)
GTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAG < SRR4302534.103089/94‑1 (MQ=60)
TTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGC < SRR4302534.1511874/94‑1 (MQ=60)
ACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGC > SRR4302534.5448462/1‑94 (MQ=60)
CTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCT < SRR4302534.2907785/94‑1 (MQ=60)
CTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCT > SRR4302534.1564262/1‑94 (MQ=60)
TGATGACCTTATTCAGCTCGCTGTGTCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCCGCAGCTG > SRR4302534.3301570/1‑94 (MQ=60)
TGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTG > SRR4302534.2363833/1‑94 (MQ=60)
TGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTG < SRR4302534.1184455/94‑1 (MQ=60)
GATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGG < SRR4302534.1137123/94‑1 (MQ=60)
ATGACCTTATTCAGCTCTCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGA < SRR4302534.1954246/94‑1 (MQ=60)
TGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGAT > SRR4302534.5330448/1‑94 (MQ=60)
GACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATC < SRR4302534.5172574/94‑1 (MQ=60)
GACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATC < SRR4302534.5625553/94‑1 (MQ=60)
GCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTGCTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCG < SRR4302534.2238604/94‑1 (MQ=60)
CCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGG < SRR4302534.2704191/94‑1 (MQ=60)
CCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGG > SRR4302534.3718740/1‑94 (MQ=60)
CCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGG > SRR4302534.527637/1‑94 (MQ=60)
CCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCACACTCAGTAGCCAGCAGCTGGATCGG > SRR4302534.866283/1‑94 (MQ=60)
CTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGC < SRR4302534.3874608/94‑1 (MQ=60)
ATTCAGCTCGCTGTTGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCC < SRR4302534.221471/94‑1 (MQ=60)
TTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCC < SRR4302534.1104044/94‑1 (MQ=60)
TCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCG < SRR4302534.813672/94‑1 (MQ=60)
TCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCG > SRR4302534.2540969/1‑94 (MQ=60)
TCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCG > SRR4302534.5310712/1‑94 (MQ=60)
AGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCG > SRR4302534.6058806/1‑94 (MQ=60)
AGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCG > SRR4302534.5239316/1‑94 (MQ=60)
AGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGACCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCG > SRR4302534.2150563/1‑94 (MQ=60)
GCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGC < SRR4302534.3812918/94‑1 (MQ=60)
TCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTTGATCGGCCCCCGCGCAA > SRR4302534.5523382/1‑94 (MQ=60)
TCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAA < SRR4302534.3351185/94‑1 (MQ=60)
CGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAA > SRR4302534.1766184/1‑94 (MQ=60)
CGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAA < SRR4302534.5729252/94‑1 (MQ=60)
GCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAA > SRR4302534.1969493/1‑94 (MQ=60)
GCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAA > SRR4302534.2668196/1‑94 (MQ=60)
CTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAAC < SRR4302534.4553560/94‑1 (MQ=60)
TGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCCAAACG > SRR4302534.5603970/1‑94 (MQ=60)
TGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACG > SRR4302534.2776080/1‑94 (MQ=60)
TGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCG < SRR4302534.5495492/94‑1 (MQ=60)
GGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCCACACGCGC > SRR4302534.3007875/1‑94 (MQ=60)
GCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCT < SRR4302534.3057311/94‑1 (MQ=60)
TGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCCACACGCGCCAA > SRR4302534.5688922/1‑94 (MQ=60)
ATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAG < SRR4302534.2967514/94‑1 (MQ=60)
ATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAG < SRR4302534.1553033/94‑1 (MQ=60)
ATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAG > SRR4302534.4013123/1‑94 (MQ=60)
TCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCGCGCGCAAAACGCGCTAAAGG < SRR4302534.6459906/94‑1 (MQ=60)
CTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGC > SRR4302534.5509257/1‑94 (MQ=60)
CTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGC > SRR4302534.169842/1‑94 (MQ=60)
TTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCC < SRR4302534.2120218/94‑1 (MQ=60)
TTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCA < SRR4302534.2319951/94‑1 (MQ=60)
TTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCCCGCAAAACGCGCTAAAGGCCA > SRR4302534.562719/1‑94 (MQ=60)
TGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAG < SRR4302534.3338925/94‑1 (MQ=60)
GCCGGAATGTTGCTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGTCCAGG < SRR4302534.2856410/94‑1 (MQ=60)
GCCGGAATGTTACTCTTCTCGGCAGGATTCTTTGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGG < SRR4302534.4224543/94‑1 (MQ=60)
GCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGG > SRR4302534.2329201/1‑94 (MQ=60)
GCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGG < SRR4302534.1161333/94‑1 (MQ=60)
CCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGC < SRR4302534.307472/94‑1 (MQ=60)
CCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGC > SRR4302534.5460647/1‑94 (MQ=60)
CGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCC < SRR4302534.544696/94‑1 (MQ=60)
CGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCC > SRR4302534.1643310/1‑94 (MQ=60)
GAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTC < SRR4302534.1890512/94‑1 (MQ=60)
AATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCC > SRR4302534.1989862/1‑94 (MQ=60)
AATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCC > SRR4302534.573860/1‑94 (MQ=60)
ATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCT > SRR4302534.4878791/1‑94 (MQ=60)
TGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTC > SRR4302534.6142042/1‑94 (MQ=60)
GTTCCTCTTCTCGGCAGTATTGTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCCCCTCG < SRR4302534.4388814/94‑1 (MQ=60)
GTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCG < SRR4302534.2684800/94‑1 (MQ=60)
TTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGC > SRR4302534.2349201/1‑94 (MQ=60)
TACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCT > SRR4302534.6101777/1‑94 (MQ=60)
TACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCT < SRR4302534.5957168/94‑1 (MQ=60)
CCTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTG < SRR4302534.5999846/94‑1 (MQ=60)
ACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTG < SRR4302534.3130059/94‑1 (MQ=60)
ACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTG > SRR4302534.4853403/1‑94 (MQ=60)
CTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGT > SRR4302534.68661/1‑94 (MQ=60)
CTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGT > SRR4302534.3193841/1‑94 (MQ=60)
TCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTA < SRR4302534.1560305/94‑1 (MQ=60)
TCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTA > SRR4302534.1499476/1‑94 (MQ=60)
TCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTA > SRR4302534.3592644/1‑94 (MQ=60)
CTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAT > SRR4302534.3223993/1‑94 (MQ=60)
CTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAT > SRR4302534.1271292/1‑94 (MQ=60)
CTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAT > SRR4302534.4717690/1‑94 (MQ=60)
TTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAAGCCAAGACTCCTCGCTGTATC > SRR4302534.3485827/1‑94 (MQ=60)
TCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCT < SRR4302534.1659492/94‑1 (MQ=60)
TCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCT < SRR4302534.197357/94‑1 (MQ=60)
CTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCTG < SRR4302534.6158098/94‑1 (MQ=60)
CTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCTG < SRR4302534.6255154/94‑1 (MQ=60)
CGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCTGTT > SRR4302534.349095/1‑94 (MQ=60)
CGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCTGTT > SRR4302534.5132450/1‑94 (MQ=60)
CGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGACCACGCGCGAAACGCGCTAAAGGCGAGGCCTCCTCGCTGTctcttat > SRR4302534.5926633/1‑87 (MQ=60)
GGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCTGTTC > SRR4302534.435025/1‑94 (MQ=60)
GGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCTGTTC > SRR4302534.2217303/1‑94 (MQ=60)
GGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCTGTTC < SRR4302534.2378073/94‑1 (MQ=60)
|
TGTTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCAGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCTGTTC > NC_000913/1668645‑1668826
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
