Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,715,389 |
G→A |
R215C (CGT→TGT) |
pdxH ← |
pyridoxinephosphate oxidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,715,389 | 0 | G | A | 100.0%
| 781.4
/ NA
| 199 | R215C (CGT→TGT) | pdxH | pyridoxinephosphate oxidase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (108/91); total (108/91) |
Only 100 of 210 total aligned reads displayed.
CCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAA > NC_000913/1715299‑1715478
|
ccAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAAt < 2:3697239/93‑1 (MQ=255)
cAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGTCAATc > 2:1110376/1‑93 (MQ=255)
cAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAAta > 2:3852680/1‑92 (MQ=255)
aGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCa > 1:5838042/1‑93 (MQ=255)
gATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCaa > 1:3255672/1‑93 (MQ=255)
gATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCaa > 1:6330134/1‑93 (MQ=255)
gATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCaa > 1:6246113/1‑93 (MQ=255)
gATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCaa > 2:4224340/1‑93 (MQ=255)
aTGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGAcaatcaat > 2:2707479/1‑93 (MQ=255)
tGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACaatcaatc < 2:1821399/93‑1 (MQ=255)
tGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACaatcaatc < 2:3629642/93‑1 (MQ=255)
tGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACaatcaatc > 1:4064573/1‑93 (MQ=255)
gCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCt < 1:5323436/93‑1 (MQ=255)
aaaGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTcc > 1:2176868/1‑93 (MQ=255)
aaaGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTcc < 2:625300/93‑1 (MQ=255)
aaaGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTcc > 2:4537429/1‑93 (MQ=255)
aaGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCa < 1:250357/93‑1 (MQ=255)
aaGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCa > 1:3067914/1‑93 (MQ=255)
aaGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCa > 1:265560/1‑93 (MQ=255)
aaGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCa > 2:5701950/1‑93 (MQ=255)
agagACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCAc > 1:1407611/1‑93 (MQ=255)
gagaCATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACg > 1:4021069/1‑93 (MQ=255)
agaCATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGc < 2:2898866/93‑1 (MQ=255)
gaCATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGca > 2:1699897/1‑93 (MQ=255)
gaCATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGca < 2:2778773/93‑1 (MQ=255)
gaCATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGca > 1:3889888/1‑93 (MQ=255)
aCATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGcat < 1:6012090/93‑1 (MQ=255)
aCATAGAATAAAGGGGCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGcat > 1:3624718/1‑93 (MQ=255)
cATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGcatc > 2:664825/1‑93 (MQ=255)
cATAGAATAAAGCGCCAGAATCAGGAGAACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGAGCAAGACAATCAATCTTCCACGcatc > 1:1797166/1‑93 (MQ=255)
tAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGcatcat < 2:4323896/93‑1 (MQ=255)
aGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCAtt > 1:2537287/1‑93 (MQ=255)
gAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCAttt > 1:3677155/1‑93 (MQ=255)
gAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCAttt > 2:2268356/1‑93 (MQ=255)
gAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCAttt > 1:21083/1‑93 (MQ=255)
aaTAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCAtttt > 2:4343287/1‑93 (MQ=255)
tAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCa < 2:1415450/93‑1 (MQ=255)
tAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCa < 2:2650943/93‑1 (MQ=255)
aaaGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCAc < 1:5414392/93‑1 (MQ=255)
aaGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGATAATCAATCTTCCACGCATCATTTTCACg > 2:6211419/1‑93 (MQ=255)
aaGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACg > 1:1719123/1‑93 (MQ=255)
aGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGc < 2:3481889/93‑1 (MQ=255)
gTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCt > 1:5053640/1‑93 (MQ=255)
gTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCt > 2:639335/1‑93 (MQ=255)
ccAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGt < 2:4940781/93‑1 (MQ=255)
cAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTa < 1:1990991/93‑1 (MQ=255)
cAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTa > 1:3301348/1‑93 (MQ=255)
aGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTAc < 1:6473208/93‑1 (MQ=255)
aGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTAc < 2:4072946/93‑1 (MQ=255)
gAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACa > 1:6416174/1‑93 (MQ=255)
gAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACa > 2:230765/1‑93 (MQ=255)
aaTCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACaa > 2:2433887/1‑93 (MQ=255)
aGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAg > 1:4538957/1‑93 (MQ=255)
aGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAg > 1:3340443/1‑93 (MQ=255)
ggAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGc > 2:856252/1‑93 (MQ=255)
gAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCg < 1:2907141/93‑1 (MQ=255)
tACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTc < 1:3007712/93‑1 (MQ=255)
aCCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCa < 1:1237092/93‑1 (MQ=255)
ccAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCAt < 1:4711327/93‑1 (MQ=255)
ccAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCAt > 2:476552/1‑93 (MQ=255)
ccAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGAGGTCAt > 2:3158739/1‑93 (MQ=255)
aGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGc < 2:5122281/93‑1 (MQ=255)
gCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCa > 2:6100546/1‑93 (MQ=255)
gCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCa < 1:6335443/93‑1 (MQ=255)
cGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAg < 1:96418/93‑1 (MQ=255)
cGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAg < 2:5411647/93‑1 (MQ=255)
gATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAgg > 2:2172723/1‑93 (MQ=255)
aTTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGc > 2:2944480/1‑93 (MQ=255)
ttAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCg > 1:3158271/1‑93 (MQ=255)
tAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGa > 2:3672890/1‑93 (MQ=255)
aaGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATg < 2:1864231/93‑1 (MQ=255)
aaGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATg > 1:5591132/1‑93 (MQ=255)
cAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTc < 2:2241100/93‑1 (MQ=255)
aaGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTca < 1:72027/93‑1 (MQ=255)
gATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTcacc > 1:5505975/1‑93 (MQ=255)
gATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTcacc > 1:1566091/1‑93 (MQ=255)
ttttGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCaccacc < 1:4614483/93‑1 (MQ=255)
tttGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCAccc < 1:1483716/93‑1 (MQ=255)
ttGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCt < 2:1293955/93‑1 (MQ=255)
ttGCATCTTTGCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACTACCCt < 1:1955647/93‑1 (MQ=255)
gCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGc < 1:427441/93‑1 (MQ=255)
gCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGc > 1:6127032/1‑93 (MQ=255)
cATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGcc > 1:5685149/1‑93 (MQ=255)
cATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGcc > 2:424952/1‑93 (MQ=255)
tCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAg > 1:1164974/1‑93 (MQ=255)
tCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAg > 2:2810224/1‑93 (MQ=255)
ttttCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGaa > 2:4417954/1‑93 (MQ=255)
ttCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACt < 1:2621058/93‑1 (MQ=255)
tCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTc < 2:1954242/93‑1 (MQ=255)
cAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCa < 2:415452/93‑1 (MQ=255)
gggTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAAt < 2:2133746/93‑1 (MQ=255)
gggTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAAt > 2:2026550/1‑93 (MQ=255)
ggTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATc < 2:1132652/93‑1 (MQ=255)
gTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCt < 1:2438570/93‑1 (MQ=255)
tGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTg > 2:5299276/1‑93 (MQ=255)
gagaaGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTg < 1:4249927/90‑1 (MQ=255)
gCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGt > 2:1642789/1‑93 (MQ=255)
cAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGtt > 2:3766593/1‑93 (MQ=255)
aaGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTc > 1:6075049/1‑93 (MQ=255)
aGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCa > 2:5862695/1‑93 (MQ=255)
|
CCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAA > NC_000913/1715299‑1715478
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCT > NC_000913/1715297‑1715482
|
CGCCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAA < SRR4302534.6637184/94‑1 (MQ=60)
GCCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAAT < SRR4302534.2827321/94‑1 (MQ=60)
GCCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAAT < SRR4302534.682997/94‑1 (MQ=60)
CCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATC > SRR4302534.4389662/1‑94 (MQ=60)
CAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCA > SRR4302534.5996528/1‑94 (MQ=60)
AGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAA > SRR4302534.3342381/1‑94 (MQ=60)
AGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAA > SRR4302534.6415535/1‑94 (MQ=60)
AGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAA > SRR4302534.6501166/1‑94 (MQ=60)
AGATGCGAAAGAGACATAGAATAAAGAGCCAGAATCAAGAGTACCAGCGATTAAAGCACACTTTTTGCATCTTTTCAGGGTGCAAGACAATCAA > SRR4302534.2764088/1‑94 (MQ=60)
GATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAAT < SRR4302534.5228066/94‑1 (MQ=60)
ATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATC > SRR4302534.4173617/1‑94 (MQ=60)
GCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTT < SRR4302534.5467022/94‑1 (MQ=60)
GAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCC > SRR4302534.2234381/1‑94 (MQ=60)
GAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCC < SRR4302534.3731313/94‑1 (MQ=60)
AAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCA > SRR4302534.272451/1‑94 (MQ=60)
AAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCA < SRR4302534.4201770/94‑1 (MQ=60)
AAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCA > SRR4302534.3148490/1‑94 (MQ=60)
AAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCAC > SRR4302534.1444632/1‑94 (MQ=60)
AAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCAC < SRR4302534.256886/94‑1 (MQ=60)
AGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACG > SRR4302534.4128873/1‑94 (MQ=60)
AGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACG < SRR4302534.6423375/94‑1 (MQ=60)
GAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGC > SRR4302534.6374805/1‑94 (MQ=60)
AGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCA > SRR4302534.3994311/1‑94 (MQ=60)
AGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCA < SRR4302534.1499798/94‑1 (MQ=60)
AGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCA > SRR4302534.3276632/1‑94 (MQ=60)
GACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCAT > SRR4302534.4150297/1‑94 (MQ=60)
GACATAGAATAAAGGGGCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCAT > SRR4302534.3722169/1‑94 (MQ=60)
ACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATC > SRR4302534.6188109/1‑94 (MQ=60)
ACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATC > SRR4302534.6021523/1‑94 (MQ=60)
ACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATC < SRR4302534.6175449/94‑1 (MQ=60)
ACATAGAATAAAGCGCCAGAATCAGGAGAACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGAGCAAGACAATCAATCTTCCACGCATC > SRR4302534.1843843/1‑94 (MQ=60)
ATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCAT > SRR4302534.6504779/1‑94 (MQ=60)
ATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCAT < SRR4302534.1357452/94‑1 (MQ=60)
TAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATT > SRR4302534.2604612/1‑94 (MQ=60)
TAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATT < SRR4302534.4818788/94‑1 (MQ=60)
TAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATT < SRR4302534.5993813/94‑1 (MQ=60)
AGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTT > SRR4302534.3776018/1‑94 (MQ=60)
AGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTT < SRR4302534.1719711/94‑1 (MQ=60)
AGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTT > SRR4302534.6025903/1‑94 (MQ=60)
AGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTT > SRR4302534.21645/1‑94 (MQ=60)
AGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTT < SRR4302534.3319441/94‑1 (MQ=60)
GAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTT < SRR4302534.2313686/94‑1 (MQ=60)
AATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTC > SRR4302534.4064625/1‑94 (MQ=60)
TAAAGTGCCAGAATCAGGAGTACCTGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCAC < SRR4302534.6516139/94‑1 (MQ=60)
AAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACG < SRR4302534.5560036/94‑1 (MQ=60)
AAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACG > SRR4302534.1763776/1‑94 (MQ=60)
AGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCT > SRR4302534.5190127/1‑94 (MQ=60)
CCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTA < SRR4302534.469976/94‑1 (MQ=60)
CCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTA > SRR4302534.3389470/1‑94 (MQ=60)
CAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTAC < SRR4302534.2043125/94‑1 (MQ=60)
agaagcaggggtaccaaggattgacgcaaggttgTTGCATCTTTCCAGGGTGCACGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACA < SRR4302534.4210402/60‑1 (MQ=60)
AGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACA < SRR4302534.6647579/94‑1 (MQ=60)
AGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACA > SRR4302534.6589277/1‑94 (MQ=60)
AATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAA < SRR4302534.6293444/94‑1 (MQ=60)
CAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAG > SRR4302534.3429821/1‑94 (MQ=60)
CAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAG < SRR4302534.3466835/94‑1 (MQ=60)
CAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAG > SRR4302534.4661982/1‑94 (MQ=60)
CAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAG > SRR4302534.2194612/1‑94 (MQ=60)
CAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAG > SRR4302534.207239/1‑94 (MQ=60)
AGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGC > SRR4302534.2712224/1‑94 (MQ=60)
GGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCG > SRR4302534.3390219/1‑94 (MQ=60)
GAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGG < SRR4302534.2983450/94‑1 (MQ=60)
AGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGT < SRR4302534.6595942/94‑1 (MQ=60)
GTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTC < SRR4302534.3348753/94‑1 (MQ=60)
TACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCA < SRR4302534.3086402/94‑1 (MQ=60)
ACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCAT < SRR4302534.1269698/94‑1 (MQ=60)
CCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATG < SRR4302534.3093134/94‑1 (MQ=60)
CCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATG < SRR4302534.4839242/94‑1 (MQ=60)
CAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGC > SRR4302534.2202029/1‑94 (MQ=60)
GCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAG < SRR4302534.6506589/94‑1 (MQ=60)
CGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGG > SRR4302534.4649104/1‑94 (MQ=60)
CGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGG < SRR4302534.98996/94‑1 (MQ=60)
ATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCG > SRR4302534.3241466/1‑94 (MQ=60)
ATTAAAGCAAGATTTTTGCATCTTTTCAGGGCGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCG > SRR4302534.2596667/1‑94 (MQ=60)
AAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATG > SRR4302534.5742281/1‑94 (MQ=60)
AGCAATATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCT < SRR4302534.3180861/94‑1 (MQ=60)
AGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCT < SRR4302534.77946/94‑1 (MQ=60)
AGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCT > SRR4302534.390977/1‑94 (MQ=60)
CAAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCA > SRR4302534.5518042/1‑94 (MQ=60)
AAGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCAC < SRR4302534.73992/94‑1 (MQ=60)
AGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACC > SRR4302534.5654474/1‑94 (MQ=60)
AGATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACC > SRR4302534.1607103/1‑94 (MQ=60)
GATTTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCA < SRR4302534.2664685/94‑1 (MQ=60)
TTTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCC < SRR4302534.4739707/94‑1 (MQ=60)
TTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCT < SRR4302534.1522748/94‑1 (MQ=60)
TTTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCT < SRR4302534.704653/94‑1 (MQ=60)
TTTGCATCTTTTCAGGATGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCAGGCAGGCGATGCTCACCACCCT < SRR4302534.5691406/94‑1 (MQ=60)
TTGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTG < SRR4302534.3007383/94‑1 (MQ=60)
TTGCATCTTTGCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACTACCCTG < SRR4302534.2006827/94‑1 (MQ=60)
TGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGC > SRR4302534.6293686/1‑94 (MQ=60)
TGCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGC > SRR4302534.2510116/1‑94 (MQ=60)
GCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAACGCGGTCATGCAGGCGATGCTCACCACCCTGCC > SRR4302534.4426610/1‑94 (MQ=60)
GCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCC < SRR4302534.438357/94‑1 (MQ=60)
GCATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCC > SRR4302534.5839102/1‑94 (MQ=60)
CATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCA < SRR4302534.2019294/94‑1 (MQ=60)
ATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAG > SRR4302534.1195557/1‑94 (MQ=60)
ATCTTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAG < SRR4302534.1599949/94‑1 (MQ=60)
TTTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAAC < SRR4302534.5653178/94‑1 (MQ=60)
TTTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACT < SRR4302534.5759290/94‑1 (MQ=60)
TTCAGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTC < SRR4302534.2690413/94‑1 (MQ=60)
AGGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAAT > SRR4302534.1227350/1‑94 (MQ=60)
GGGTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATC > SRR4302534.1888227/1‑94 (MQ=60)
GTGCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTG < SRR4302534.2503377/94‑1 (MQ=60)
gagAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGT < SRR4302534.4364573/91‑1 (MQ=60)
GCAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTT > SRR4302534.4873553/1‑94 (MQ=60)
CAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTC < SRR4302534.1776803/94‑1 (MQ=60)
CAAGACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTC > SRR4302534.6240226/1‑94 (MQ=60)
ACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGG > SRR4302534.2911955/1‑94 (MQ=60)
ACAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGG < SRR4302534.820334/94‑1 (MQ=60)
CAATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGC < SRR4302534.968330/94‑1 (MQ=60)
AATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCCAGGCT > SRR4302534.4180247/1‑94 (MQ=60)
AATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCT < SRR4302534.2195184/94‑1 (MQ=60)
AATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCT > SRR4302534.1597692/1‑94 (MQ=60)
AATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCT < SRR4302534.2997438/94‑1 (MQ=60)
AATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCT > SRR4302534.3746127/1‑94 (MQ=60)
|
CGCCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCT > NC_000913/1715297‑1715482
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
