Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,643,412 |
T→C |
E82E (GAA→GAG) |
relE ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,643,412 | 0 | T | C | 98.5%
| 690.0
/ ‑1.3
| 197 | E82E (GAA→GAG) | relE | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (84/110); total (85/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.00e-01 |
Only 100 of 206 total aligned reads displayed.
AAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAAT > NC_000913/1643322‑1643501
|
aaGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCtc < 1:876567/93‑1 (MQ=255)
aaGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCtc < 1:704600/93‑1 (MQ=255)
gCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCtctc > 2:332514/1‑93 (MQ=255)
gCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCtctc < 1:3432072/93‑1 (MQ=255)
gCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTGTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCtctc < 1:31490/93‑1 (MQ=255)
cAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGctctct < 2:5847960/93‑1 (MQ=255)
aGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCtt < 2:6021201/93‑1 (MQ=255)
aGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCtt < 2:1615965/93‑1 (MQ=255)
aGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCtt < 1:4204968/93‑1 (MQ=255)
gAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCttt > 1:5352900/1‑93 (MQ=255)
aGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTc < 1:5169594/93‑1 (MQ=255)
gtgtCGCCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTcc < 1:3578279/93‑1 (MQ=255)
tgtCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTccc > 2:2234604/1‑93 (MQ=255)
tgtCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTccc < 2:2407447/93‑1 (MQ=255)
tgtCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTccc > 2:1643242/1‑93 (MQ=255)
tCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCaa > 2:246995/1‑93 (MQ=255)
cACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAAc < 2:3793729/93‑1 (MQ=255)
cACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAAc < 2:227455/93‑1 (MQ=255)
cccTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACa < 1:2448991/92‑1 (MQ=255)
ccTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAg < 1:3471432/93‑1 (MQ=255)
cTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGa < 2:1706226/93‑1 (MQ=255)
cTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGa > 1:3616455/1‑93 (MQ=255)
tCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGaaa < 1:1429598/93‑1 (MQ=255)
tCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGaaa > 2:4759516/1‑93 (MQ=255)
cGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAAt < 1:2261967/93‑1 (MQ=255)
ggTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATc < 1:1335566/93‑1 (MQ=255)
gTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCa > 1:5780455/1‑93 (MQ=255)
gAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCTAACAGAAATCACGaa < 2:5995966/93‑1 (MQ=255)
aCAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAAc > 1:5912079/1‑93 (MQ=255)
aCAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAAc < 2:3662305/93‑1 (MQ=255)
aCAGAGATGTCATGCTTTGGCTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAAc > 1:5620476/1‑93 (MQ=255)
cAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACg < 1:2634113/93‑1 (MQ=255)
agagATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGa > 1:4465906/1‑93 (MQ=255)
agagATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGa > 2:6067857/1‑93 (MQ=255)
gagaTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGAc > 2:2832568/1‑93 (MQ=255)
gaTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACaa < 1:1052566/93‑1 (MQ=255)
gaTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACaa > 2:2564131/1‑93 (MQ=255)
gaTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACaa < 2:3951443/93‑1 (MQ=255)
gaTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACaa > 1:1412667/1‑93 (MQ=255)
aTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAAc < 2:4404561/93‑1 (MQ=255)
gTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACtt > 2:1215496/1‑93 (MQ=255)
tCATGCTTTGGTTCAGAGAATGCGTTTGCCCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACttt < 2:309432/93‑1 (MQ=255)
tCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACttt > 1:4040540/1‑93 (MQ=255)
cATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTtc < 2:5511422/93‑1 (MQ=255)
aTGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTtct < 1:3553611/93‑1 (MQ=255)
cTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGt < 1:37573/93‑1 (MQ=255)
cTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGt < 1:1696219/93‑1 (MQ=255)
tttGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTc > 2:1488945/1‑93 (MQ=255)
ttGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCt < 2:4127818/93‑1 (MQ=255)
ggTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCtat < 2:4977933/93‑1 (MQ=255)
gTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCtata < 2:6113388/93‑1 (MQ=255)
gTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCtata < 2:720881/93‑1 (MQ=255)
gTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCtata < 1:2089309/93‑1 (MQ=255)
ttCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATaa < 2:3441443/93‑1 (MQ=255)
ttCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATaa < 2:458326/93‑1 (MQ=255)
cAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAAcc < 1:1269127/93‑1 (MQ=255)
gagaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTg > 2:3960711/1‑93 (MQ=255)
gagaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTg < 1:556705/93‑1 (MQ=255)
gagaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTg > 1:899174/1‑93 (MQ=255)
gaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGt < 2:3549950/93‑1 (MQ=255)
aaTGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGta < 1:278304/93‑1 (MQ=255)
aaTGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGta > 2:3033235/1‑93 (MQ=255)
aaTGCGTTTGACCGCCTCGCTATATACTCCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGta < 1:3129498/93‑1 (MQ=255)
aTGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGtat < 1:4760133/93‑1 (MQ=255)
gCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATAc < 1:4894416/93‑1 (MQ=255)
cGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACa < 2:5273065/93‑1 (MQ=255)
cGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACa < 1:3515284/93‑1 (MQ=255)
gTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACaa > 2:5140531/1‑93 (MQ=255)
gTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACaa > 1:3194979/1‑93 (MQ=255)
gTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACaa < 2:424039/93‑1 (MQ=255)
tttGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAg > 1:2919871/1‑93 (MQ=255)
gttGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAg < 1:3223162/92‑1 (MQ=255)
ttGACCGCCTCGCTATATTCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAgg < 2:1021511/93‑1 (MQ=255)
ttGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAgg < 1:6069881/93‑1 (MQ=255)
tGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGc < 1:3859419/93‑1 (MQ=255)
ccGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGTCAGCTTTCTCGTCTATAACCTGGTATACAAGGCGAt < 1:4164096/93‑1 (MQ=255)
ccGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGAt < 1:946489/93‑1 (MQ=255)
ccGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGAt < 2:2098403/93‑1 (MQ=255)
ccGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGAt < 2:2584426/93‑1 (MQ=255)
gCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAg > 1:2015600/1‑93 (MQ=255)
cTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGcc < 2:5773305/93‑1 (MQ=255)
cTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGcc < 2:5609915/93‑1 (MQ=255)
tCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCt > 1:5536663/1‑93 (MQ=255)
gCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGa > 1:3376039/1‑93 (MQ=255)
cTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGaa > 1:5191464/1‑93 (MQ=255)
cTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGaa < 2:2948531/93‑1 (MQ=255)
tatataCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAATGCGATAGCCTGAAg > 1:5109895/1‑93 (MQ=255)
atataCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGa > 2:3804631/1‑93 (MQ=255)
tataCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGAc < 2:5187534/93‑1 (MQ=255)
tataCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGAc > 1:86164/1‑93 (MQ=255)
tataCTTCCGAGCGCTCTCTTTTCACAACAGACATCACGACAACGTCAACTTTCTCGTCTATAACCTGGTATACAAGGCGATACACTGAAGAc > 1:2316883/1‑93 (MQ=255)
ataCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGAcc < 2:4850819/93‑1 (MQ=255)
ataCTCCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACATCTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGAcc < 1:4612430/93‑1 (MQ=255)
taCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATATCCTGGTATACAAGGCGATAGCCTGAAGACCg < 2:4008198/93‑1 (MQ=255)
ttCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAg < 2:3843674/93‑1 (MQ=255)
ttCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAg < 2:573354/93‑1 (MQ=255)
ttCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAg < 2:4328220/93‑1 (MQ=255)
tCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGc < 2:4468136/93‑1 (MQ=255)
gAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTa > 2:5355030/1‑93 (MQ=255)
gcgcTCTCTTTTCCCAACAGAAATCAGGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGTGATAGCCTGAAGACCGGAGCTTAAt > 2:1445895/1‑93 (MQ=255)
|
AAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAAT > NC_000913/1643322‑1643501
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTG > NC_000913/1643319‑1643505
|
GCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGC > SRR4302532.6137199/1‑94 (MQ=60)
CAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCT > SRR4302532.485013/1‑94 (MQ=60)
CAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCT > SRR4302532.485014/1‑94 (MQ=60)
AAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCT < SRR4302532.906548/94‑1 (MQ=60)
AAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCT < SRR4302532.728684/94‑1 (MQ=60)
AGCAGACGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTC > SRR4302532.6207311/1‑94 (MQ=60)
GCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCT < SRR4302532.3547065/94‑1 (MQ=60)
GCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTGTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCT < SRR4302532.32678/94‑1 (MQ=60)
AGAAGTGTCACCTTCGGTGCGCAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTT > SRR4302532.3304413/1‑94 (MQ=60)
AGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTT < SRR4302532.3647576/94‑1 (MQ=60)
AGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTT < SRR4302532.4346134/94‑1 (MQ=60)
AGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTT > SRR4302532.289722/1‑94 (MQ=60)
AGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTT > SRR4302532.5538548/1‑94 (MQ=60)
AGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCC < SRR4302532.5347633/94‑1 (MQ=60)
GTGTCGCCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCC < SRR4302532.3697996/94‑1 (MQ=60)
CACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACA > SRR4302532.1424119/1‑94 (MQ=60)
CCCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAG < SRR4302532.2530425/94‑1 (MQ=60)
ACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAG > SRR4302532.2155652/1‑94 (MQ=60)
CCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGA < SRR4302532.3587692/94‑1 (MQ=60)
CCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGA > SRR4302532.3737415/1‑94 (MQ=60)
CTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAA > SRR4302532.362438/1‑94 (MQ=60)
CTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAA > SRR4302532.3762024/1‑94 (MQ=60)
CTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAA > SRR4302532.4761579/1‑94 (MQ=60)
TTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAA < SRR4302532.5763007/94‑1 (MQ=60)
TCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAAT < SRR4302532.1477666/94‑1 (MQ=60)
CGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATC < SRR4302532.2337023/94‑1 (MQ=60)
GGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCA < SRR4302532.1380240/94‑1 (MQ=60)
GGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCA > SRR4302532.5981517/1‑94 (MQ=60)
CGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAA > SRR4302532.925827/1‑94 (MQ=60)
AACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAAC > SRR4302532.6116824/1‑94 (MQ=60)
AACAGAGATGTCATGCTTTGGCTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAAC > SRR4302532.5815504/1‑94 (MQ=60)
ACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACG < SRR4302532.4293244/94‑1 (MQ=60)
ACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACG < SRR4302532.3237242/94‑1 (MQ=60)
ACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACG > SRR4302532.70781/1‑94 (MQ=60)
CAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGA < SRR4302532.2722372/94‑1 (MQ=60)
CAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGA > SRR4302532.4618157/1‑94 (MQ=60)
AGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGAC > SRR4302532.2337987/1‑94 (MQ=60)
AGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGAC < SRR4302532.5753187/94‑1 (MQ=60)
AGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAA < SRR4302532.2875995/94‑1 (MQ=60)
AGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAA > SRR4302532.1460042/1‑94 (MQ=60)
GATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAAC < SRR4302532.1088051/94‑1 (MQ=60)
TGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTT < SRR4302532.2276501/94‑1 (MQ=60)
GTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTT < SRR4302532.3039503/94‑1 (MQ=60)
GTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTT > SRR4302532.4176643/1‑94 (MQ=60)
TCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTC < SRR4302532.4311095/94‑1 (MQ=60)
ATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTC < SRR4302532.3672511/94‑1 (MQ=60)
TGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCG > SRR4302532.1333041/1‑94 (MQ=60)
GCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGT > SRR4302532.3512982/1‑94 (MQ=60)
CTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTC < SRR4302532.38949/94‑1 (MQ=60)
CTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTC > SRR4302532.1803274/1‑94 (MQ=60)
CTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTC < SRR4302532.1753463/94‑1 (MQ=60)
TGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTAT < SRR4302532.417049/94‑1 (MQ=60)
GTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAA < SRR4302532.2158993/94‑1 (MQ=60)
CAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCT > SRR4302532.5357495/1‑94 (MQ=60)
CAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCT < SRR4302532.1311584/94‑1 (MQ=60)
AGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTG > SRR4302532.929840/1‑94 (MQ=60)
AGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTG > SRR4302532.3354817/1‑94 (MQ=60)
AGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTG > SRR4302532.2552397/1‑94 (MQ=60)
GAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGG < SRR4302532.576120/94‑1 (MQ=60)
GAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGG < SRR4302532.862087/94‑1 (MQ=60)
AGAAGGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAGCTTCCTCGTCTATAACCTGGT < SRR4302532.502576/94‑1 (MQ=60)
AATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTAT < SRR4302532.287940/94‑1 (MQ=60)
AATGCGTTTGACCGCCTCGCTATATACTCCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTAT < SRR4302532.3233391/94‑1 (MQ=60)
ATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATA < SRR4302532.4923072/94‑1 (MQ=60)
ATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATA > SRR4302532.484790/1‑94 (MQ=60)
GCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACA < SRR4302532.5062610/94‑1 (MQ=60)
GCGTTTGACCGCCTCGCTATATACTTCCGAGCCCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACA < SRR4302532.2480745/94‑1 (MQ=60)
CGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAA < SRR4302532.3632982/94‑1 (MQ=60)
CGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAA > SRR4302532.3301064/1‑94 (MQ=60)
GTTTGACCGCCTCGCTATATCCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAG < SRR4302532.5249747/94‑1 (MQ=60)
GTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAG < SRR4302532.799079/94‑1 (MQ=60)
GTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAG > SRR4302532.3017110/1‑94 (MQ=60)
gttaACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGG < SRR4302532.4501870/90‑1 (MQ=60)
TTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGG > SRR4302532.3686866/1‑94 (MQ=60)
GTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGG < SRR4302532.3330165/94‑1 (MQ=60)
TTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGC < SRR4302532.6279521/94‑1 (MQ=60)
TTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGC > SRR4302532.5407363/1‑94 (MQ=60)
TGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCG < SRR4302532.3989718/94‑1 (MQ=60)
TGACCGCCTCGATATATACTTCCGAGCGCTCTCTTTACCCAACAGAAATCACGAAGACGACAACTTTCTCGTCTATAACCTaataatcaaggcg < SRR4302532.5659243/94‑14 (MQ=60)
CCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGTCAGCTTTCTCGTCTATAACCTGGTATACAAGGCGATA < SRR4302532.4303740/94‑1 (MQ=60)
CCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATA < SRR4302532.978880/94‑1 (MQ=60)
CGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAG > SRR4302532.2082808/1‑94 (MQ=60)
GCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGC > SRR4302532.5883426/1‑94 (MQ=60)
CTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCT > SRR4302532.5728816/1‑94 (MQ=60)
CGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGA > SRR4302532.3488944/1‑94 (MQ=60)
GCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAA > SRR4302532.5370386/1‑94 (MQ=60)
GCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAA < SRR4302532.3886707/94‑1 (MQ=60)
CTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAATGCGATAGCCTGAAG > SRR4302532.5285586/1‑94 (MQ=60)
CTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAG > SRR4302532.3315066/1‑94 (MQ=60)
TATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGA > SRR4302532.90219/1‑94 (MQ=60)
TATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGA > SRR4302532.5291557/1‑94 (MQ=60)
TATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGA < SRR4302532.3275203/94‑1 (MQ=60)
ATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGAC > SRR4302532.5999420/1‑94 (MQ=60)
ATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGAC < SRR4302532.3571985/94‑1 (MQ=60)
ATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGAC > SRR4302532.89213/1‑94 (MQ=60)
ATATACTTCCGAGCGCTCTCTTTTCACAACAGACATCACGACAACGTCAACTTTCTCGTCTATAACCTGGTATACAAGGCGATACACTGAAGAC > SRR4302532.2394002/1‑94 (MQ=60)
TATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACC < SRR4302532.1138668/94‑1 (MQ=60)
ATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCG < SRR4302532.5159637/94‑1 (MQ=60)
ATACTCCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACATCTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCG < SRR4302532.4769695/94‑1 (MQ=60)
TACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGG < SRR4302532.1469057/94‑1 (MQ=60)
ACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGA < SRR4302532.3705884/94‑1 (MQ=60)
CTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAG > SRR4302532.1688024/1‑94 (MQ=60)
AGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACACCTTTCTCGTCTATATCCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAAT < SRR4302532.937497/94‑1 (MQ=60)
GCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATC < SRR4302532.1013508/94‑1 (MQ=60)
CGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCT > SRR4302532.4011987/1‑94 (MQ=60)
CGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCT > SRR4302532.2159383/1‑94 (MQ=60)
GCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTT > SRR4302532.4240158/1‑94 (MQ=60)
CTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTG < SRR4302532.4791396/94‑1 (MQ=60)
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GCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTG > NC_000913/1643319‑1643505
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
