Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,643,412 |
T→C |
E82E (GAA→GAG) |
relE ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,643,412 | 0 | T | C | 99.6%
| 855.7
/ NA
| 233 | E82E (GAA→GAG) | relE | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (104/128); minor base A (1/0); total (105/128) |
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 243 total aligned reads displayed.
AAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAAT > NC_000913/1643322‑1643501
|
aGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGctct < 1:3462737/93‑1 (MQ=255)
cAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGctctct > 1:1458007/1‑93 (MQ=255)
aGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCtt > 1:5873739/1‑93 (MQ=255)
gAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCttt < 1:1153971/93‑1 (MQ=255)
gAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCttt > 2:6306430/1‑93 (MQ=255)
aGTGTCACCTTCGGTGCGACACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTc > 1:6482630/1‑93 (MQ=255)
tCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCaa < 2:5213529/93‑1 (MQ=255)
cACCTTCGGTGCGAAACAGAGATGGCATGCTTTGGTTCAGAGAATGCGTTTGACAGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAAc > 1:4296584/1‑93 (MQ=255)
ccTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAg < 2:5296461/93‑1 (MQ=255)
ccTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAg < 1:3807754/93‑1 (MQ=255)
cTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGa < 1:17712/93‑1 (MQ=255)
ttCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGaa < 1:1560791/93‑1 (MQ=255)
ggTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATc < 2:710601/93‑1 (MQ=255)
ggTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATc > 1:4551131/1‑93 (MQ=255)
gAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGaa > 2:3622170/1‑93 (MQ=255)
aaaCAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGaaa > 1:4058356/1‑93 (MQ=255)
aaCAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGaaaa < 2:93566/93‑1 (MQ=255)
aaCAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGaaaa < 2:4716121/93‑1 (MQ=255)
cAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACg < 1:6629840/93‑1 (MQ=255)
agagATGTCATGCTTTGGTTCAGAGCATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGa > 1:2036387/1‑93 (MQ=255)
agagATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGa < 2:963599/93‑1 (MQ=255)
gagaTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAACACGAc > 1:1249762/1‑93 (MQ=255)
agaTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACa > 2:1306816/1‑93 (MQ=255)
agaTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACa < 1:238963/93‑1 (MQ=255)
gaTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACaa < 1:4881462/93‑1 (MQ=255)
tGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACt > 2:3652087/1‑93 (MQ=255)
tGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACt > 1:2570140/1‑93 (MQ=255)
gTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACtt > 2:4350149/1‑93 (MQ=255)
aTGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTtct < 2:906905/93‑1 (MQ=255)
tGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTtctc < 2:3196714/93‑1 (MQ=255)
cTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGt > 1:1374889/1‑93 (MQ=255)
tttGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTc > 1:3005578/1‑93 (MQ=255)
tttGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTc < 2:4296984/93‑1 (MQ=255)
tttGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTc > 1:1879619/1‑93 (MQ=255)
ttGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATGCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCt < 2:1882156/93‑1 (MQ=255)
ttGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCt < 2:2595667/93‑1 (MQ=255)
ttGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCt < 2:4214804/93‑1 (MQ=255)
tGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCta > 1:2982508/1‑93 (MQ=255)
tGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCta < 2:6114698/93‑1 (MQ=255)
ggTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCtat < 2:821912/93‑1 (MQ=255)
ggTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCtat < 1:874924/93‑1 (MQ=255)
cAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAAcc > 2:4045774/1‑93 (MQ=255)
agagAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCt < 1:3346232/93‑1 (MQ=255)
agagAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCt < 1:5762852/93‑1 (MQ=255)
gagaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTg < 2:2466088/93‑1 (MQ=255)
gagaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTg > 1:2127331/1‑93 (MQ=255)
agaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTgg < 1:6590328/93‑1 (MQ=255)
agaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTgg < 2:4063374/93‑1 (MQ=255)
agaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTgg < 1:557945/93‑1 (MQ=255)
agaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTgg < 1:402754/93‑1 (MQ=255)
gaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGt > 2:6337201/1‑93 (MQ=255)
aaTGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGta < 1:4217258/93‑1 (MQ=255)
aTGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGtat > 1:5230213/1‑93 (MQ=255)
tGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGtata > 1:3744222/1‑93 (MQ=255)
tGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGtata > 2:2106991/1‑93 (MQ=255)
tGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTGCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGtata < 2:2369713/93‑1 (MQ=255)
gCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATAc < 2:3367715/93‑1 (MQ=255)
gTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACaa < 2:1161873/93‑1 (MQ=255)
gTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACaa < 2:1076370/93‑1 (MQ=255)
gTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACaa < 1:506829/93‑1 (MQ=255)
tttGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAg < 2:6504292/93‑1 (MQ=255)
tttGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAg > 2:5618827/1‑93 (MQ=255)
tttGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAg < 1:5797900/93‑1 (MQ=255)
ttGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAgg < 1:367040/93‑1 (MQ=255)
ttGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAgg < 2:2196498/93‑1 (MQ=255)
tGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGc < 1:1086767/93‑1 (MQ=255)
tGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGc > 2:6091130/1‑93 (MQ=255)
tGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGc > 1:4635248/1‑93 (MQ=255)
tGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGc < 2:4245448/93‑1 (MQ=255)
tGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGc < 2:1674046/93‑1 (MQ=255)
aCCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGa < 2:1052029/93‑1 (MQ=255)
aCCGCCTCGCTATATACTTCCGAGCGCTCACTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGa < 2:281940/93‑1 (MQ=255)
ccGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGAt < 1:1401913/93‑1 (MQ=255)
cGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATa < 2:4669365/93‑1 (MQ=255)
ccTCTCTATATACTTCCGACCGCTCCCTTCTCCCAACAGAACTCACGAAAACGACACCTTTCTCGTCTATAACCTGGTATACAAGGCGATAGc < 2:3465873/93‑1 (MQ=255)
cTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGcc > 2:5188381/1‑93 (MQ=255)
tCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCt > 2:2806670/1‑93 (MQ=255)
tCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCt > 2:5991775/1‑93 (MQ=255)
tCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCt < 2:4953455/93‑1 (MQ=255)
tCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCt > 2:1602226/1‑93 (MQ=255)
cTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGaa > 1:3967944/1‑93 (MQ=255)
atatataCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGaa < 2:2881598/92‑1 (MQ=255)
tatataCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAg > 2:6275061/1‑93 (MQ=255)
tatataCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGCTATACAAGTCGATAGCCTGAAg > 1:2520023/1‑93 (MQ=255)
atataCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGa > 1:5890685/1‑93 (MQ=255)
atataCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGa > 2:3569627/1‑93 (MQ=255)
ataCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGAcc < 2:1699160/93‑1 (MQ=255)
taCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCg > 2:4454421/1‑93 (MQ=255)
taCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCg < 1:2923622/93‑1 (MQ=255)
taCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCg < 1:2144166/93‑1 (MQ=255)
aCTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAATCGACACCTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCgg < 1:3614005/93‑1 (MQ=255)
cTTCCGAGCGCTCTCTTTCCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGa < 2:5805428/93‑1 (MQ=255)
ttCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAg > 1:5414318/1‑93 (MQ=255)
ttCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAg < 2:225400/93‑1 (MQ=255)
ttCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAg > 1:1211892/1‑93 (MQ=255)
ccGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCt < 1:1825461/93‑1 (MQ=255)
ccGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCt < 1:3552508/93‑1 (MQ=255)
ccGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCt < 1:74140/93‑1 (MQ=255)
gcgcTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAAt < 1:2717554/93‑1 (MQ=255)
gcgcTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAAt > 2:3270603/1‑93 (MQ=255)
|
AAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAAT > NC_000913/1643322‑1643501
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTG > NC_000913/1643320‑1643505
|
CAAAGCAGAAGTGTCACGTTCGGTGCGAAACAGAGATGTCATTCTTTGGGTCAGAGCATGCGTTTGACCCCCTCGCCATATACTTCCGAGCGCT > SRR4302547.2525773/1‑94 (MQ=60)
CAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCT > SRR4302547.4870314/1‑94 (MQ=60)
CAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCT < SRR4302547.5820993/94‑1 (MQ=60)
AAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTC < SRR4302547.760284/94‑1 (MQ=60)
AAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCT < SRR4302547.6663140/94‑1 (MQ=60)
AGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTC < SRR4302547.3533348/94‑1 (MQ=60)
AGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTC > SRR4302547.1845222/1‑94 (MQ=60)
GCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCT > SRR4302547.1487141/1‑94 (MQ=60)
CAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTT > SRR4302547.4300049/1‑94 (MQ=60)
CAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTT > SRR4302547.5995321/1‑94 (MQ=60)
AGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTT < SRR4302547.186500/94‑1 (MQ=60)
GAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTT < SRR4302547.1177321/94‑1 (MQ=60)
AAGTGTCACCTTCGGTGCGACACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTC > SRR4302547.6617589/1‑94 (MQ=60)
TGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCA > SRR4302547.3717804/1‑94 (MQ=60)
GTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAA < SRR4302547.5823827/94‑1 (MQ=60)
GTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAA < SRR4302547.2144187/94‑1 (MQ=60)
TCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAAC < SRR4302547.4941906/94‑1 (MQ=60)
TCACCTTCGGTGCGAAACAGAGATGGCATGCTTTGGTTCAGAGAATGCGTTTGACAGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAAC > SRR4302547.4384923/1‑94 (MQ=60)
CACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACA < SRR4302547.3000664/94‑1 (MQ=60)
ACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAG > SRR4302547.2176072/1‑94 (MQ=60)
CCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGA > SRR4302547.5925541/1‑94 (MQ=60)
CCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGA < SRR4302547.3885366/94‑1 (MQ=60)
CTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAA < SRR4302547.18048/94‑1 (MQ=60)
TTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAA < SRR4302547.1591884/94‑1 (MQ=60)
TTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAA > SRR4302547.2756731/1‑94 (MQ=60)
TCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAAT < SRR4302547.2982344/94‑1 (MQ=60)
CGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATC < SRR4302547.2702691/94‑1 (MQ=60)
CGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATC > SRR4302547.5697514/1‑94 (MQ=60)
CGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATC > SRR4302547.4645265/1‑94 (MQ=60)
GTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCAC > SRR4302547.6228588/1‑94 (MQ=60)
GTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCAC < SRR4302547.3516417/94‑1 (MQ=60)
TGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACG < SRR4302547.3236999/94‑1 (MQ=60)
GCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGA < SRR4302547.361892/94‑1 (MQ=60)
CGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAA > SRR4302547.4098370/1‑94 (MQ=60)
CGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAA < SRR4302547.744483/94‑1 (MQ=60)
GAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAA > SRR4302547.4140771/1‑94 (MQ=60)
AAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAA > SRR4302547.3056841/1‑94 (MQ=60)
ACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACG > SRR4302547.3860979/1‑94 (MQ=60)
CAGAGATGTCATGCTTTGGTTCAGAGCATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGA > SRR4302547.2076975/1‑94 (MQ=60)
CAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGA < SRR4302547.6767852/94‑1 (MQ=60)
AGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAACACGAC > SRR4302547.1274980/1‑94 (MQ=60)
AGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGAC > SRR4302547.1506668/1‑94 (MQ=60)
AGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTNCCCAACAGAAATCACGAAAACGAC > SRR4302547.2260255/1‑94 (MQ=60)
AGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAA < SRR4302547.243437/94‑1 (MQ=60)
AGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAA < SRR4302547.3999785/94‑1 (MQ=60)
AGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAA > SRR4302547.3662652/1‑94 (MQ=60)
GATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAAC < SRR4302547.4982598/94‑1 (MQ=60)
ATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACT > SRR4302547.2622043/1‑94 (MQ=60)
ATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACT > SRR4302547.1322027/1‑94 (MQ=60)
TCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTC > SRR4302547.5969602/1‑94 (MQ=60)
TCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTC < SRR4302547.1408211/94‑1 (MQ=60)
CATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCT < SRR4302547.4787976/94‑1 (MQ=60)
ATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTC > SRR4302547.3588086/1‑94 (MQ=60)
TGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCG < SRR4302547.3155216/94‑1 (MQ=60)
TGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCG < SRR4302547.4704645/94‑1 (MQ=60)
GCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGT > SRR4302547.1402458/1‑94 (MQ=60)
CTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTC > SRR4302547.3065352/1‑94 (MQ=60)
CTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTC < SRR4302547.2124309/94‑1 (MQ=60)
CTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTC > SRR4302547.1916760/1‑94 (MQ=60)
TTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCT < SRR4302547.6009395/94‑1 (MQ=60)
TTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTA > SRR4302547.3041867/1‑94 (MQ=60)
TGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTAT > SRR4302547.5305286/1‑94 (MQ=60)
TGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTAT < SRR4302547.1522450/94‑1 (MQ=60)
GTTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATA < SRR4302547.4307922/94‑1 (MQ=60)
GGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATA < SRR4302547.3804390/94‑1 (MQ=60)
GGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATA < SRR4302547.891718/94‑1 (MQ=60)
CAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCT > SRR4302547.4223641/1‑94 (MQ=60)
AGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTG > SRR4302547.2169731/1‑94 (MQ=60)
AGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTG < SRR4302547.5916739/94‑1 (MQ=60)
AGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTG < SRR4302547.5882030/94‑1 (MQ=60)
AGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTG < SRR4302547.3414024/94‑1 (MQ=60)
AGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGT < SRR4302547.567999/94‑1 (MQ=60)
AGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGT < SRR4302547.410233/94‑1 (MQ=60)
AGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGT < SRR4302547.6727526/94‑1 (MQ=60)
AATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTAT > SRR4302547.5337873/1‑94 (MQ=60)
AATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTAT < SRR4302547.1160358/94‑1 (MQ=60)
AATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTAT < SRR4302547.4303352/94‑1 (MQ=60)
ATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATA > SRR4302547.3820646/1‑94 (MQ=60)
GTTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAG < SRR4302547.516029/94‑1 (MQ=60)
TTTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGG < SRR4302547.5917828/94‑1 (MQ=60)
TTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGC > SRR4302547.939937/1‑94 (MQ=60)
TTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGC < SRR4302547.688176/94‑1 (MQ=60)
TTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGC > SRR4302547.4731261/1‑94 (MQ=60)
TTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGC < SRR4302547.5467229/94‑1 (MQ=60)
TTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGC < SRR4302547.373845/94‑1 (MQ=60)
TTGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGC < SRR4302547.2620022/94‑1 (MQ=60)
TGACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCG < SRR4302547.1108497/94‑1 (MQ=60)
GACCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGA > SRR4302547.5405327/1‑94 (MQ=60)
CCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATA < SRR4302547.4126419/94‑1 (MQ=60)
CCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATA < SRR4302547.2359771/94‑1 (MQ=60)
CCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATA > SRR4302547.5149081/1‑94 (MQ=60)
CCGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATA < SRR4302547.1429960/94‑1 (MQ=60)
CGCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAG < SRR4302547.6745543/94‑1 (MQ=60)
GCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGC > SRR4302547.451441/1‑94 (MQ=60)
GCCTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGC < SRR4302547.1455419/94‑1 (MQ=60)
CTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATGCAAGGCGATAGCCT < SRR4302547.1407994/94‑1 (MQ=60)
CTCGCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCT > SRR4302547.3968867/1‑94 (MQ=60)
GCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAA > SRR4302547.4048649/1‑94 (MQ=60)
GCTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAA > SRR4302547.6656776/1‑94 (MQ=60)
CTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAG < SRR4302547.4385086/94‑1 (MQ=60)
CTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAA < SRR4302547.1723277/94‑1 (MQ=60)
CTATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGCTATACAAGTCGATAGCCTGAAG > SRR4302547.2570957/1‑94 (MQ=60)
TATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGA > SRR4302547.6012641/1‑94 (MQ=60)
ATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGAC > SRR4302547.1268836/1‑94 (MQ=60)
ATATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGAC > SRR4302547.1240884/1‑94 (MQ=60)
TATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACC < SRR4302547.1894479/94‑1 (MQ=60)
ATACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCG > SRR4302547.1190410/1‑94 (MQ=60)
TACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGG < SRR4302547.2186935/94‑1 (MQ=60)
TACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGG < SRR4302547.2981915/94‑1 (MQ=60)
ACTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAATCGACACCTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGA < SRR4302547.3687730/94‑1 (MQ=60)
CTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAG > SRR4302547.3755124/1‑94 (MQ=60)
CTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAG > SRR4302547.1236354/1‑94 (MQ=60)
CTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAG < SRR4302547.5628722/94‑1 (MQ=60)
CTTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAG > SRR4302547.5526310/1‑94 (MQ=60)
CTTCCGAGCGCTCTCTTTTACCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGACGATAGCCTGAAGACCGGAG > SRR4302547.758032/1‑94 (MQ=60)
TTCCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGC < SRR4302547.1001424/94‑1 (MQ=60)
CCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTT < SRR4302547.3625012/94‑1 (MQ=60)
CCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTT > SRR4302547.2563124/1‑94 (MQ=60)
CCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTT < SRR4302547.75531/94‑1 (MQ=60)
CCGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTT < SRR4302547.1861547/94‑1 (MQ=60)
CGAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTA < SRR4302547.2046779/94‑1 (MQ=60)
GAGCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAA > SRR4302547.2914064/1‑94 (MQ=60)
AGCGCGCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAAT < SRR4302547.1148435/94‑1 (MQ=60)
GCGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATC < SRR4302547.2772108/94‑1 (MQ=60)
CGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCT > SRR4302547.6634068/1‑94 (MQ=60)
CGCTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCT > SRR4302547.2032473/1‑94 (MQ=60)
CTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTG > SRR4302547.3827806/1‑94 (MQ=60)
|
CAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTG > NC_000913/1643320‑1643505
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
