Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	521	238.2	12299412	96.0%	11807435	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,949,344	G→A	Q174Q (CAG→CAA)	yecD →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,949,344	0	G	A	78.7%	1986.1 / inf	878	Q174Q (CAG→CAA)	yecD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (82/105); new base A (385/305); total (467/411)
Fisher's exact test for biased strand distribution p-value = 3.86e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-02

Only 100 of 945 total aligned reads displayed.

TCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTA  >  NC_000913/1949253‑1949436

 cGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAgcagca                                                                                            >  2:1674388/1‑93 (MQ=255)

  ggTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGACGACGCCTGTAGTGCCGCCAGCGCCGAGCAacac                                                                                           >  2:5939671/1‑93 (MQ=255)

  ggTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAacac                                                                                           <  2:5339748/93‑1 (MQ=255)

   gtgtTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAAcaca                                                                                          >  1:3626361/1‑93 (MQ=255)

    tgtTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACaa                                                                                         <  2:3631834/93‑1 (MQ=255)

     gtTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAAt                                                                                        >  1:549488/1‑93 (MQ=255)

     gtTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAAt                                                                                        >  2:2965824/1‑93 (MQ=255)

     gtTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAAt                                                                                        <  2:2251899/93‑1 (MQ=255)

      ttGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCAAGCAACACAATa                                                                                       >  1:5356470/1‑93 (MQ=255)

       tGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATaa                                                                                      >  1:2729844/1‑93 (MQ=255)

        gAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAAc                                                                                     >  2:4120953/1‑93 (MQ=255)

         aaTCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACa                                                                                    <  2:1950929/93‑1 (MQ=255)

          aTCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAg                                                                                   <  1:2454395/93‑1 (MQ=255)

           tCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAgc                                                                                  >  1:1438415/1‑92 (MQ=255)

            ccACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTa                                                                                 <  1:2926036/93‑1 (MQ=255)

            ccACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTa                                                                                 <  1:4540723/93‑1 (MQ=255)

            ccACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAgca                                                                                 <  1:1672501/93‑3 (MQ=255)

             cACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTAt                                                                                <  2:3204951/93‑1 (MQ=255)

                    cgcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCat                                                                         >  2:2409699/1‑93 (MQ=255)

                     gcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCata                                                                        <  1:384200/93‑1 (MQ=255)

                     gcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCata                                                                        <  2:5011814/93‑1 (MQ=255)

                      cAATGCCTGGTAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCatat                                                                       <  1:2601891/93‑1 (MQ=255)

                      cAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCatat                                                                       >  2:5537091/1‑93 (MQ=255)

                       aaTGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATc                                                                      <  2:4209238/93‑1 (MQ=255)

                       aaTGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATc                                                                      <  1:4691338/93‑1 (MQ=255)

                        aTGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCt                                                                     >  1:4131166/1‑93 (MQ=255)

                         tGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTa                                                                    <  1:5282379/93‑1 (MQ=255)

                         tGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTa                                                                    <  2:5460320/93‑1 (MQ=255)

                         tGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTa                                                                    <  1:351660/93‑1 (MQ=255)

                         tGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTa                                                                    >  2:4626551/1‑93 (MQ=255)

                           ccTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTAcc                                                                  >  2:836837/1‑93 (MQ=255)

                            cggggACCTTGGCTTTAATCTGGTGATTGCCTAAGACGCCTGTAGTGCCGCCAGCCCCGAGCAACACAATAATAGCATTAATCATATCTTccc                                                                 <  1:491135/91‑1 (MQ=255)

                            cTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTAccc                                                                 >  1:4000982/1‑93 (MQ=255)

                            cTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTAccc                                                                 <  2:3727499/93‑1 (MQ=255)

                            cTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTAccc                                                                 >  1:4798124/1‑93 (MQ=255)

                             tGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCcg                                                                >  1:5243215/1‑93 (MQ=255)

                             tGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCcg                                                                >  2:1109606/1‑93 (MQ=255)

                             tGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCcg                                                                <  2:1571518/93‑1 (MQ=255)

                             tGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCACAGCCGAGAAACACAATAACAGCATTAATCATATCCACCcg                                                                >  1:581995/1‑93 (MQ=255)

                              gggAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCcgc                                                               >  2:5659860/1‑93 (MQ=255)

                              gggAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCcgc                                                               >  1:5583942/1‑93 (MQ=255)

                              gggAACTTGGCTTCAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCcgc                                                               >  2:4869870/1‑93 (MQ=255)

                                gAACTTGGCTTTAATCTGGGTGTTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCgcgc                                                             <  2:4765060/93‑1 (MQ=255)

                                 aaCTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCa                                                            <  2:4473375/93‑1 (MQ=255)

                                    ttGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCg                                                         >  1:5163445/1‑93 (MQ=255)

                                    ttGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCg                                                         >  2:2714766/1‑93 (MQ=255)

                                    ttGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCg                                                         >  1:5949609/1‑93 (MQ=255)

                                    ttGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCg                                                         >  1:604865/1‑93 (MQ=255)

                                     tGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGc                                                        >  1:4255869/1‑93 (MQ=255)

                                       gCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGccc                                                      <  1:5699021/93‑1 (MQ=255)

                                       gCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGccc                                                      >  1:2346347/1‑93 (MQ=255)

                                        cTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCg                                                     <  2:5140443/93‑1 (MQ=255)

                                        cTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCg                                                     <  2:3105195/93‑1 (MQ=255)

                                        cTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCg                                                     <  2:1202339/93‑1 (MQ=255)

                                        cTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCg                                                     <  1:2826519/93‑1 (MQ=255)

                                           tAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCgtgt                                                  >  2:6112922/1‑93 (MQ=255)

                                            aaTCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGtgtg                                                 <  1:5088634/93‑1 (MQ=255)

                                             aTCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGc                                                >  2:4561205/1‑93 (MQ=255)

                                             aTCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGc                                                >  2:401333/1‑93 (MQ=255)

                                              tCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCg                                               <  2:3840720/93‑1 (MQ=255)

                                               cTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGt                                              >  1:4400574/1‑93 (MQ=255)

                                               cTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGt                                              <  1:253624/93‑1 (MQ=255)

                                               cTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGt                                              <  1:681767/93‑1 (MQ=255)

                                                tGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTa                                             <  1:2058996/93‑1 (MQ=255)

                                                tGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTa                                             >  2:5224387/1‑93 (MQ=255)

                                                 ggTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAg                                            <  1:1968141/93‑1 (MQ=255)

                                                 ggTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAg                                            >  2:5789343/1‑93 (MQ=255)

                                                      ttGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTgg                                       >  2:2808102/1‑93 (MQ=255)

                                                       tGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGa                                      <  1:1202017/93‑1 (MQ=255)

                                                          cGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAaga                                   <  2:2051199/93‑1 (MQ=255)

                                                              gACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATc                               <  2:2880829/93‑1 (MQ=255)

                                                               aCGCGTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATcc                              <  2:1317268/93‑1 (MQ=255)

                                                               aCGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATcc                              <  1:3026887/93‑1 (MQ=255)

                                                               aCGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATcc                              <  1:5027889/93‑1 (MQ=255)

                                                                cGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCt                             <  1:5420928/93‑1 (MQ=255)

                                                                 gCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTc                            >  2:1461688/1‑93 (MQ=255)

                                                                    tGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCttcac                         >  2:932212/1‑89 (MQ=255)

                                                                    tGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGCGCGTAGCGTGGAAGAGATCCttcac                         >  2:258248/1‑89 (MQ=255)

                                                                       aGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCAcgcg                      >  2:1746531/1‑93 (MQ=255)

                                                                         tGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGtt                    >  1:3170717/1‑93 (MQ=255)

                                                                            cgccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATg                 <  2:4364165/93‑1 (MQ=255)

                                                                             gccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGa                <  1:3403970/93‑1 (MQ=255)

                                                                              ccAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAt               <  2:690227/93‑1 (MQ=255)

                                                                                 gcgcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTa            <  1:1007673/93‑1 (MQ=255)

                                                                                 gcgcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTa            <  2:181909/93‑1 (MQ=255)

                                                                                   gcCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACa          <  1:21699/93‑1 (MQ=255)

                                                                                   gcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACa          <  2:1402003/93‑1 (MQ=255)

                                                                                   gcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACa          <  1:3333317/93‑1 (MQ=255)

                                                                                    ccGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACAt         <  1:1097367/93‑1 (MQ=255)

                                                                                    ccGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAt         <  1:97899/93‑1 (MQ=255)

                                                                                    ccGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAt         <  2:586890/93‑1 (MQ=255)

                                                                                    ccGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAt         <  1:1354512/93‑1 (MQ=255)

                                                                                       agcagcACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCgg      >  2:3436520/1‑93 (MQ=255)

                                                                                       agcaacACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCgg      >  1:3712419/1‑93 (MQ=255)

                                                                                       agcaacACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCgg      <  1:155527/93‑1 (MQ=255)

                                                                                        gcagcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGt     >  2:4252552/1‑93 (MQ=255)

                                                                                        gcaacaCAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGt     <  1:787003/93‑1 (MQ=255)

                                                                                        gcaacaCAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGt     <  1:1866064/93‑1 (MQ=255)

                                                                                        gcaacaCAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGCGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGt     <  2:78238/93‑1 (MQ=255)

                                                                                          agcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCt   >  2:3302917/1‑93 (MQ=255)

TCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTA  >  NC_000913/1949253‑1949436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 523 total aligned reads displayed.

TATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTAC  >  NC_000913/1949251‑1949437

TATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAA                                                                                               >  SRR4302532.2478692/1‑94 (MQ=60)

 ATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGCAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGC                                                                                              >  SRR4302532.2069810/1‑94 (MQ=60)

 ATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAAC                                                                                              >  SRR4302532.684395/1‑94 (MQ=60)

 ATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAAC                                                                                              >  SRR4302532.5074916/1‑94 (MQ=60)

   CGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACAC                                                                                            <  SRR4302532.6000237/94‑1 (MQ=60)

   CGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACAC                                                                                            <  SRR4302532.2837032/94‑1 (MQ=60)

   CGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAATGCCGCCAGCGCCGAGCAGCAC                                                                                            >  SRR4302532.1651100/1‑94 (MQ=60)

    GGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACA                                                                                           <  SRR4302532.6110462/94‑1 (MQ=60)

    GGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACA                                                                                           <  SRR4302532.3456157/94‑1 (MQ=60)

     TTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAA                                                                                          >  SRR4302532.616441/1‑94 (MQ=60)

      TGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAAT                                                                                         <  SRR4302532.2287111/94‑1 (MQ=60)

      TGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAAT                                                                                         >  SRR4302532.568657/1‑94 (MQ=60)

      TGTTGAAACCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAAT                                                                                         >  SRR4302532.3300120/1‑94 (MQ=60)

        TTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAA                                                                                       >  SRR4302532.2821627/1‑94 (MQ=60)

        TTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAA                                                                                       >  SRR4302532.5138461/1‑94 (MQ=60)

        TTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAA                                                                                       <  SRR4302532.3997012/94‑1 (MQ=60)

        TTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAA                                                                                       >  SRR4302532.5438413/1‑94 (MQ=60)

         TGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAAC                                                                                      <  SRR4302532.4200273/94‑1 (MQ=60)

          GAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACA                                                                                     >  SRR4302532.1245177/1‑94 (MQ=60)

          GAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACA                                                                                     >  SRR4302532.2957221/1‑94 (MQ=60)

          GAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGACTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACA                                                                                     <  SRR4302532.3892401/94‑1 (MQ=60)

           AATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAG                                                                                    >  SRR4302532.3360118/1‑94 (MQ=60)

           AATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAG                                                                                    <  SRR4302532.5361905/94‑1 (MQ=60)

           AAGCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTTCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAG                                                                                    <  SRR4302532.1787893/94‑1 (MQ=60)

            ATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGC                                                                                   >  SRR4302532.5862485/1‑94 (MQ=60)

            ATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGC                                                                                   <  SRR4302532.4777254/94‑1 (MQ=60)

            ATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGC                                                                                   >  SRR4302532.3776434/1‑94 (MQ=60)

             TCCACCGCCCGCAATGCCTGGGATCTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCA                                                                                  <  SRR4302532.3615294/94‑1 (MQ=60)

             TCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCA                                                                                  >  SRR4302532.1119927/1‑94 (MQ=60)

             TCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCA                                                                                  >  SRR4302532.5843342/1‑94 (MQ=60)

              CCCCCGCCCGCAATGCCTGGAAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCAT                                                                                 <  SRR4302532.4659385/94‑1 (MQ=60)

              CCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTAT                                                                                 <  SRR4302532.3023398/94‑1 (MQ=60)

              CCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTAT                                                                                 <  SRR4302532.4695722/94‑1 (MQ=60)

              CCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCAT                                                                                 <  SRR4302532.1729077/94‑1 (MQ=60)

               CAGCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcatt                                                                                <  SRR4302532.1008991/94‑5 (MQ=60)

               CACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcatt                                                                                <  SRR4302532.1565829/94‑5 (MQ=60)

                ACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCA                                                                               <  SRR4302532.991645/94‑1 (MQ=60)

                ACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcatta                                                                               >  SRR4302532.3825675/1‑89 (MQ=60)

                  CGCCTGCAGTGCCTGGGATCTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaat                                                                             <  SRR4302532.3111588/94‑8 (MQ=60)

                  CGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaat                                                                             <  SRR4302532.2988029/94‑8 (MQ=60)

                    CCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCA                                                                           <  SRR4302532.5281964/94‑1 (MQ=60)

                    CCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaatca                                                                           >  SRR4302532.1593431/1‑85 (MQ=60)

                     CCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaatcat                                                                          <  SRR4302532.6188349/94‑11 (MQ=60)

                     CCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaatcat                                                                          >  SRR4302532.2106348/1‑84 (MQ=60)

                     CCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaatcat                                                                          <  SRR4302532.3626811/94‑11 (MQ=60)

                      CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATA                                                                         >  SRR4302532.2142700/1‑94 (MQ=60)

                      CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATA                                                                         <  SRR4302532.734620/94‑1 (MQ=60)

                       GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATAT                                                                        <  SRR4302532.4433518/94‑1 (MQ=60)

                       GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATAT                                                                        >  SRR4302532.2553650/1‑94 (MQ=60)

                        CAATGCCTGGTAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATC                                                                       <  SRR4302532.2688893/94‑1 (MQ=60)

                        CAATGCCTGGGAGCTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATC                                                                       <  SRR4302532.2446124/94‑1 (MQ=60)

                        CAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaatcatatt                                                                       >  SRR4302532.6041160/1‑81 (MQ=60)

                        CAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATC                                                                       <  SRR4302532.2579133/94‑1 (MQ=60)

                        CAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATC                                                                       >  SRR4302532.2065033/1‑94 (MQ=60)

                        CAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATC                                                                       >  SRR4302532.1058736/1‑94 (MQ=60)

                         AATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCT                                                                      >  SRR4302532.5448958/1‑94 (MQ=60)

                         AATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCT                                                                      >  SRR4302532.5461883/1‑94 (MQ=60)

                         AATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCT                                                                      <  SRR4302532.2154405/94‑1 (MQ=60)

                         AATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCT                                                                      >  SRR4302532.4269762/1‑94 (MQ=60)

                         AATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCT                                                                      <  SRR4302532.4851342/94‑1 (MQ=60)

                          ATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTA                                                                     >  SRR4302532.4930018/1‑94 (MQ=60)

                           TGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTAC                                                                    <  SRR4302532.5464566/94‑1 (MQ=60)

                           TGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTAC                                                                    <  SRR4302532.4952728/94‑1 (MQ=60)

                            GCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACC                                                                   >  SRR4302532.5616857/1‑94 (MQ=60)

                             CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCC                                                                  >  SRR4302532.4135767/1‑94 (MQ=60)

                             CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCC                                                                  >  SRR4302532.4963375/1‑94 (MQ=60)

                             CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCC                                                                  <  SRR4302532.3647437/94‑1 (MQ=60)

                              CTGGGAACTTGGCTTTAATCTGGTGATTGCCGCAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                 >  SRR4302532.3584015/1‑94 (MQ=60)

                              CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCG                                                                 >  SRR4302532.5423968/1‑94 (MQ=60)

                              CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                 >  SRR4302532.2654123/1‑94 (MQ=60)

                              CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                 >  SRR4302532.3083728/1‑94 (MQ=60)

                              CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                 >  SRR4302532.1166089/1‑94 (MQ=60)

                              CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                 >  SRR4302532.602289/1‑94 (MQ=60)

                              CGGGGACCTTGGCTTTAATCTGGTGATTGCCTAAGACGCCTGTAGTGCCGCCAGCCCCGAGCAACACAATAATAGCATTAATCATATCTTCCCG                                                                 <  SRR4302532.508302/94‑1 (MQ=55)

                               TGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGC                                                                >  SRR4302532.5748274/1‑94 (MQ=60)

                               TGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGC                                                                >  SRR4302532.3843549/1‑94 (MQ=60)

                                 GGAACTTGGATTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGC                                                              >  SRR4302532.271712/1‑94 (MQ=60)

                                  GAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCA                                                             <  SRR4302532.6152755/94‑1 (MQ=60)

                                   AACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAT                                                            <  SRR4302532.4614463/94‑1 (MQ=60)

                                   AACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAT                                                            <  SRR4302532.2114168/94‑1 (MQ=60)

                                    ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                           >  SRR4302532.4618759/1‑94 (MQ=60)

                                    ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                           >  SRR4302532.6308918/1‑94 (MQ=60)

                                    ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                           <  SRR4302532.3562933/94‑1 (MQ=60)

                                     CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCG                                                          <  SRR4302532.1985569/94‑1 (MQ=60)

                                     CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                          >  SRR4302532.5341166/1‑94 (MQ=60)

                                     CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                          >  SRR4302532.702871/1‑94 (MQ=60)

                                     CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                          >  SRR4302532.625996/1‑94 (MQ=60)

                                     CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                          >  SRR4302532.5556575/1‑94 (MQ=60)

                                        GGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCC                                                       <  SRR4302532.1132525/94‑1 (MQ=60)

                                        GGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCC                                                       <  SRR4302532.1477423/94‑1 (MQ=60)

                                         GCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCG                                                      <  SRR4302532.1335442/94‑1 (MQ=60)

                                          CTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGT                                                     <  SRR4302532.2921054/94‑1 (MQ=60)

                                          CTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGT                                                     >  SRR4302532.4875672/1‑94 (MQ=60)

                                           TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTG                                                    <  SRR4302532.5414499/94‑1 (MQ=60)

                                           TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                    >  SRR4302532.5519363/1‑94 (MQ=60)

                                           TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                    >  SRR4302532.5162289/1‑94 (MQ=60)

                                           TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                    >  SRR4302532.3206351/1‑94 (MQ=60)

                                             TAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTG                                                  >  SRR4302532.1886411/1‑94 (MQ=60)

                                              AATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGC                                                 >  SRR4302532.2522712/1‑94 (MQ=60)

                                              AATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGC                                                 <  SRR4302532.5263604/94‑1 (MQ=60)

                                               ATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCG                                                >  SRR4302532.4493648/1‑94 (MQ=60)

                                               ATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCG                                                >  SRR4302532.327300/1‑94 (MQ=60)

                                                TCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGT                                               >  SRR4302532.2433730/1‑94 (MQ=60)

                                                TCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGT                                               >  SRR4302532.795200/1‑94 (MQ=60)

                                                 CTGGTGCTTGCCGAAGATGCCTGTAGTACCGGCAGAGATGAGCAACACTCTAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTC                                              >  SRR4302532.3952621/1‑94 (MQ=16)

                                                 CTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTA                                              <  SRR4302532.5905708/94‑1 (MQ=60)

                                                 CTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTA                                              >  SRR4302532.2675505/1‑94 (MQ=60)

                                                  TGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAG                                             <  SRR4302532.5296422/94‑1 (MQ=60)

                                                   GGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGC                                            >  SRR4302532.4166818/1‑94 (MQ=60)

                                                    GTGATTTCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCG                                           <  SRR4302532.294671/94‑1 (MQ=60)

                                                    GTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCG                                           >  SRR4302532.1286291/1‑94 (MQ=60)

                                                    GTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCG                                           <  SRR4302532.5714877/94‑1 (MQ=60)

                                                    GTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCG                                           >  SRR4302532.2418223/1‑94 (MQ=60)

                                                      GATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTG                                         <  SRR4302532.1966440/94‑1 (MQ=60)

                                                       ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                        <  SRR4302532.5601914/94‑1 (MQ=60)

                                                       ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                        >  SRR4302532.1536866/1‑94 (MQ=60)

                                                       ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                        >  SRR4302532.5728425/1‑94 (MQ=60)

                                                       ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                        <  SRR4302532.6231705/94‑1 (MQ=60)

                                                       ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                        >  SRR4302532.3700458/1‑94 (MQ=60)

                                                       ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                        >  SRR4302532.4071364/1‑94 (MQ=60)

                                                        TTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGA                                       <  SRR4302532.3522778/94‑1 (MQ=60)

                                                         TGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAA                                      <  SRR4302532.2902434/94‑1 (MQ=60)

                                                          GCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAG                                     <  SRR4302532.5244350/94‑1 (MQ=60)

                                                          GCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAG                                     <  SRR4302532.5584142/94‑1 (MQ=60)

                                                            CGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                   >  SRR4302532.4455379/1‑94 (MQ=60)

                                                            CGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                   >  SRR4302532.2268943/1‑94 (MQ=60)

                                                            CGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                   >  SRR4302532.1516644/1‑94 (MQ=60)

                                                            CGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                   >  SRR4302532.4388833/1‑94 (MQ=60)

                                                             GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                  >  SRR4302532.3730478/1‑94 (MQ=60)

                                                             GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                  >  SRR4302532.4124701/1‑94 (MQ=60)

                                                             GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                  >  SRR4302532.583462/1‑94 (MQ=60)

                                                             GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                  >  SRR4302532.3680088/1‑94 (MQ=60)

                                                             GAAGACGCCTGTAATGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATTGCCCGCGCGCGTAGCGTGGAAGAGA                                  >  SRR4302532.3487338/1‑94 (MQ=60)

                                                              AAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGAT                                 <  SRR4302532.3048959/94‑1 (MQ=60)

                                                               AGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATC                                <  SRR4302532.6084573/94‑1 (MQ=60)

                                                                GACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCC                               >  SRR4302532.888934/1‑94 (MQ=60)

                                                                 ACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCT                              >  SRR4302532.1380111/1‑94 (MQ=60)

                                                                 ACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCT                              <  SRR4302532.3126749/94‑1 (MQ=60)

                                                                 ACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCT                              <  SRR4302532.5325679/94‑1 (MQ=60)

                                                                 ACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCT                              <  SRR4302532.5200343/94‑1 (MQ=60)

                                                                  CGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTC                             >  SRR4302532.1212686/1‑94 (MQ=60)

                                                                  CGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTT                             <  SRR4302532.5608813/94‑1 (MQ=60)

                                                                   GCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtc                            <  SRR4302532.5397169/94‑3 (MQ=60)

                                                                    CCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtca                           >  SRR4302532.74938/1‑91 (MQ=60)

                                                                    CCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtca                           <  SRR4302532.5967746/94‑4 (MQ=60)

                                                                     CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                          <  SRR4302532.1093416/94‑5 (MQ=60)

                                                                     CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                          >  SRR4302532.5490375/1‑90 (MQ=60)

                                                                     CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                          >  SRR4302532.5110105/1‑90 (MQ=60)

                                                                     CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                          >  SRR4302532.5007682/1‑90 (MQ=60)

                                                                      TGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACG                         <  SRR4302532.1460401/94‑1 (MQ=60)

                                                                      TGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACG                         >  SRR4302532.2883301/1‑94 (MQ=60)

                                                                      TGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcacg                         >  SRR4302532.2001283/1‑89 (MQ=60)

                                                                      TGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcacg                         >  SRR4302532.6166835/1‑89 (MQ=60)

                                                                       GTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGC                        >  SRR4302532.1866429/1‑94 (MQ=60)

                                                                       GTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGC                        >  SRR4302532.2375141/1‑94 (MQ=60)

                                                                       GTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGC                        >  SRR4302532.3425032/1‑94 (MQ=60)

                                                                        TAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCG                       <  SRR4302532.3436645/94‑1 (MQ=60)

                                                                         AGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAatcccgaagatcggaa                      >  SRR4302532.5494652/1‑78 (MQ=60)

                                                                          GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                     >  SRR4302532.2545819/1‑94 (MQ=60)

                                                                          GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                     >  SRR4302532.379354/1‑94 (MQ=60)

                                                                          GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                     >  SRR4302532.3276029/1‑94 (MQ=60)

                                                                           TGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTA                    >  SRR4302532.4278083/1‑94 (MQ=60)

                                                                            GCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTAT                   <  SRR4302532.2631405/94‑1 (MQ=60)

                                                                             CCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATG                  <  SRR4302532.2200902/94‑1 (MQ=60)

                                                                              CGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGA                 >  SRR4302532.1692895/1‑94 (MQ=60)

                                                                              CGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCATGGAAGAGATCCTTCACGCGTTATGA                 <  SRR4302532.5655130/94‑1 (MQ=60)

                                                                               GCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAT                >  SRR4302532.2785003/1‑94 (MQ=60)

                                                                               GCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAT                <  SRR4302532.3857249/94‑1 (MQ=60)

                                                                               GCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                <  SRR4302532.4721262/94‑1 (MQ=60)

                                                                                CCAGGACCGAGCAACACAATAACAGCATTAATCATATCTCCCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATT               <  SRR4302532.1702719/94‑1 (MQ=60)

                                                                                CCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATT               <  SRR4302532.4291187/94‑1 (MQ=60)

                                                                                CCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATT               <  SRR4302532.3228510/94‑1 (MQ=60)

                                                                                 CAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTT              <  SRR4302532.202534/94‑1 (MQ=60)

                                                                                  AGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTA             <  SRR4302532.5785222/94‑1 (MQ=60)

                                                                                   GCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTAC            >  SRR4302532.2833215/1‑94 (MQ=60)

                                                                                     GCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACAT          <  SRR4302532.22570/94‑1 (MQ=60)

                                                                                     GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT          >  SRR4302532.376588/1‑94 (MQ=60)

                                                                                     GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT          <  SRR4302532.3496666/94‑1 (MQ=60)

                                                                                      CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC         >  SRR4302532.637273/1‑94 (MQ=60)

                                                                                      CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC         <  SRR4302532.101298/94‑1 (MQ=60)

                                                                                      CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC         <  SRR4302532.115288/94‑1 (MQ=60)

                                                                                      CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC         <  SRR4302532.498797/94‑1 (MQ=60)

                                                                                      CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC         <  SRR4302532.1399820/94‑1 (MQ=60)

                                                                                      CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC         >  SRR4302532.5643800/1‑94 (MQ=60)

                                                                                       CGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCG        >  SRR4302532.4237179/1‑94 (MQ=60)

                                                                                       CGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCG        >  SRR4302532.4677945/1‑94 (MQ=60)

                                                                                       CGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCG        >  SRR4302532.3470273/1‑94 (MQ=60)

                                                                                        GAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGG       <  SRR4302532.523701/94‑1 (MQ=60)

                                                                                          GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC     <  SRR4302532.1427292/94‑1 (MQ=60)

                                                                                          GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC     <  SRR4302532.814007/94‑1 (MQ=60)

                                                                                           CAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCT    <  SRR4302532.5795874/94‑1 (MQ=60)

                                                                                           CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT    <  SRR4302532.4561177/94‑1 (MQ=60)

                                                                                           CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT    >  SRR4302532.6295031/1‑94 (MQ=60)

                                                                                           CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT    <  SRR4302532.4402225/94‑1 (MQ=60)

                                                                                           CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT    <  SRR4302532.1035500/94‑1 (MQ=60)

                                                                                           CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT    >  SRR4302532.2610592/1‑94 (MQ=60)

                                                                                            ACCACAATAACAGCATTAATCATATCTACCCGCGCATCCCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG   <  SRR4302532.4823087/94‑1 (MQ=60)

                                                                                            AACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG   >  SRR4302532.2765713/1‑94 (MQ=60)

                                                                                            AACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG   <  SRR4302532.5102369/94‑1 (MQ=60)

                                                                                             ACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGC  >  SRR4302532.1619573/1‑94 (MQ=60)

TATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTAC  >  NC_000913/1949251‑1949437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`