Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,949,356 T→C S178S (AGT→AGC yecD → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,949,3560TC76.8% 1790.1 / inf 931S178S (AGT→AGCyecDhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (104/112);  new base C (407/308);  total (511/420)
Fisher's exact test for biased strand distribution p-value = 2.39e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.24e-03

Only 100 of 948 total aligned reads displayed.

CCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCG  >  NC_000913/1949265‑1949448
                                                                                           |                                                                                            
 cACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCAt                                                                                            >  2:5724627/1‑93 (MQ=255)
 cACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGAGCCGAGCAACACAATACCAGCAt                                                                                            >  2:3642516/1‑93 (MQ=255)
  cccgcccgcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATc                                                                                           <  2:5659407/92‑1 (MQ=255)
  aCCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCAtt                                                                                           >  1:4783624/1‑92 (MQ=255)
    cgcccgcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTaa                                                                                         >  2:5206750/1‑93 (MQ=255)
      cccgcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTaatc                                                                                       >  2:4319333/1‑91 (MQ=255)
        cgcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCat                                                                                     <  1:976685/93‑1 (MQ=255)
        cgcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCat                                                                                     >  2:2162387/1‑93 (MQ=255)
         gcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCata                                                                                    >  1:4641821/1‑93 (MQ=255)
          cAATGCCTGGTAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCatat                                                                                   <  1:2601891/93‑1 (MQ=255)
          cAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCatat                                                                                   >  1:5664432/1‑93 (MQ=255)
           aaTGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATc                                                                                  <  1:4094839/93‑1 (MQ=255)
           aaTGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATc                                                                                  <  1:2084886/93‑1 (MQ=255)
            aTGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCt                                                                                 >  1:5279783/1‑93 (MQ=255)
             tGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTa                                                                                <  2:5459744/93‑1 (MQ=255)
             tGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTa                                                                                <  2:2562060/93‑1 (MQ=255)
              gCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTAc                                                                               <  2:4616202/93‑1 (MQ=255)
               ccTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTAcc                                                                              >  2:2390795/1‑93 (MQ=255)
                cTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTAccc                                                                             >  2:3255674/1‑93 (MQ=255)
                 tGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCcg                                                                            >  1:2985032/1‑93 (MQ=255)
                  gggAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCcgc                                                                           >  2:3322607/1‑93 (MQ=255)
                  gggAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCcgc                                                                           >  1:5583942/1‑93 (MQ=255)
                    gAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCgcgc                                                                         >  2:5558287/1‑93 (MQ=255)
                      aCTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAt                                                                       <  1:5793037/93‑1 (MQ=255)
                      aCTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAt                                                                       <  2:919030/93‑1 (MQ=255)
                      aCTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAt                                                                       <  1:3447450/93‑1 (MQ=255)
                      aCTGGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAt                                                                       <  1:3066927/93‑1 (MQ=255)
                       cTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATc                                                                      >  2:533211/1‑93 (MQ=255)
                       cTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATc                                                                      >  2:4827982/1‑93 (MQ=255)
                        ttGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATcc                                                                     >  2:5907147/1‑92 (MQ=255)
                        ttGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCg                                                                     >  2:2714766/1‑93 (MQ=255)
                         tGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGc                                                                    >  1:6089134/1‑93 (MQ=255)
                          ggCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGcc                                                                   <  1:1095881/93‑1 (MQ=255)
                            cTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCg                                                                 <  1:428244/93‑1 (MQ=255)
                            cTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCg                                                                 >  2:4917829/1‑93 (MQ=255)
                            cTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCg                                                                 >  2:349493/1‑93 (MQ=255)
                              ttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgtg                                                               >  2:4029363/1‑93 (MQ=255)
                              ttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgtg                                                               >  1:5886091/1‑93 (MQ=255)
                                aaTCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGtgtg                                                             >  2:5132487/1‑93 (MQ=255)
                                   cTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGt                                                          <  1:5319469/93‑1 (MQ=255)
                                   cTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGt                                                          >  1:2355149/1‑93 (MQ=255)
                                   cTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGt                                                          >  1:3664588/1‑93 (MQ=255)
                                   cTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGt                                                          >  1:4400574/1‑93 (MQ=255)
                                      gTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGc                                                       <  1:1378345/93‑1 (MQ=255)
                                          ttGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTgg                                                   >  1:200018/1‑93 (MQ=255)
                                          ttGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTgg                                                   >  1:1486713/1‑93 (MQ=255)
                                          ttGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTgg                                                   <  1:4905759/93‑1 (MQ=255)
                                          ttGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTgg                                                   >  2:1249830/1‑93 (MQ=255)
                                           tGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGa                                                  <  2:65076/93‑1 (MQ=255)
                                           tGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGa                                                  <  2:1076077/93‑1 (MQ=255)
                                           tGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGa                                                  <  1:1202017/93‑1 (MQ=255)
                                            gCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGaa                                                 <  1:5070112/93‑1 (MQ=255)
                                             ccGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAag                                                <  2:3778476/93‑1 (MQ=255)
                                              cGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAaga                                               <  2:2791543/93‑1 (MQ=255)
                                               gAAGACGCCTGTAGGGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAagag                                              <  1:2845356/93‑1 (MQ=255)
                                                aaGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAgaga                                             >  1:3990288/1‑93 (MQ=255)
                                                 aGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGAt                                            <  1:3547650/93‑1 (MQ=255)
                                                 aGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGAt                                            <  1:4970484/93‑1 (MQ=255)
                                                  gACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATc                                           <  1:4509041/93‑1 (MQ=255)
                                                  gACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATc                                           <  2:2948630/93‑1 (MQ=255)
                                                  gACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATc                                           <  2:2880829/93‑1 (MQ=255)
                                                   aCGCGTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATcc                                          <  2:1317268/93‑1 (MQ=255)
                                                   aCGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATcc                                          <  1:5148563/93‑1 (MQ=255)
                                                    cGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCt                                         >  2:4418394/1‑93 (MQ=255)
                                                    cGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCt                                         <  1:5420928/93‑1 (MQ=255)
                                                        tGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAAc                                     >  2:780946/1‑93 (MQ=255)
                                                        tGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGAGGAAGAGATCCTCAAc                                     >  1:2466212/1‑93 (MQ=255)
                                                        tGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCttcac                                     >  2:4514268/1‑89 (MQ=255)
                                                          tAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCAcgc                                   >  2:424713/1‑93 (MQ=255)
                                                             tGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGtt                                >  1:3218781/1‑93 (MQ=255)
                                                              gccgccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTa                               >  1:4139230/1‑93 (MQ=255)
                                                                 gccAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGa                            <  1:3731880/93‑1 (MQ=255)
                                                                 gccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGa                            >  1:5234214/1‑93 (MQ=255)
                                                                  ccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAt                           >  2:6023301/1‑93 (MQ=255)
                                                                   cAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAtt                          <  2:202988/93‑1 (MQ=255)
                                                                   cAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAtt                          <  2:1769079/93‑1 (MQ=255)
                                                                     gcgcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTa                        >  2:4697698/1‑93 (MQ=255)
                                                                     gcgcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTa                        >  2:1460871/1‑93 (MQ=255)
                                                                     gcgcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTa                        <  2:1595253/93‑1 (MQ=255)
                                                                      cgcCGAGCAGCACAATAACAGTAACAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTAc                       <  1:1784439/93‑1 (MQ=255)
                                                                      cgcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTAc                       >  1:2741122/1‑93 (MQ=255)
                                                                       gctgAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACa                      >  1:5468067/4‑93 (MQ=255)
                                                                       gcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACa                      <  2:1402003/93‑1 (MQ=255)
                                                                        ccGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAt                     >  1:1917401/1‑93 (MQ=255)
                                                                        ccGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAt                     >  1:2540825/1‑93 (MQ=255)
                                                                        ccGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAt                     <  2:5856509/93‑1 (MQ=255)
                                                                         cGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATc                    >  2:1148658/1‑93 (MQ=255)
                                                                          gAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCg                   >  1:3358101/1‑93 (MQ=255)
                                                                           agcagcACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCgg                  <  1:775726/93‑1 (MQ=255)
                                                                            gcagcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGt                 >  1:1607083/1‑93 (MQ=255)
                                                                            gcaacaCAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGt                 >  2:836195/1‑93 (MQ=255)
                                                                             caacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTc                <  1:1001413/90‑1 (MQ=255)
                                                                             caacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTc                <  1:2204931/90‑1 (MQ=255)
                                                                              aacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCt               >  1:669887/3‑93 (MQ=255)
                                                                               gcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTa              >  2:3146011/1‑93 (MQ=255)
                                                                                cacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCtgc             <  2:3902463/93‑3 (MQ=255)
                                                                                cacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCtgc             <  2:4198326/93‑3 (MQ=255)
                                                                                  caATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCg           >  1:5986525/1‑93 (MQ=255)
                                                                                    aTAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCa         >  2:1893721/1‑93 (MQ=255)
                                                                                        cAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATgg     <  2:1728725/93‑1 (MQ=255)
                                                                                           |                                                                                            
CCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCG  >  NC_000913/1949265‑1949448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 488 total aligned reads displayed.
ATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCG  >  NC_000913/1949263‑1949448
                                                                                             |                                                                                            
ATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGC                                                                                              >  SRR4302532.366162/1‑94 (MQ=60)
 TCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCA                                                                                             >  SRR4302532.2702940/1‑94 (MQ=60)
 TCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCA                                                                                             >  SRR4302532.1119927/1‑94 (MQ=60)
 TCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCA                                                                                             >  SRR4302532.5843342/1‑94 (MQ=60)
  CCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGAGGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCAT                                                                                            <  SRR4302532.4917819/94‑1 (MQ=60)
  CCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCAT                                                                                            >  SRR4302532.4460288/1‑94 (MQ=60)
  CCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGAAACACAATAACAGCAT                                                                                            >  SRR4302532.2133532/1‑94 (MQ=60)
   CACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATC                                                                                           <  SRR4302532.3109232/94‑1 (MQ=60)
   CACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATC                                                                                           >  SRR4302532.5102812/1‑94 (MQ=60)
    ACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCA                                                                                          <  SRR4302532.991645/94‑1 (MQ=60)
     CCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAA                                                                                         <  SRR4302532.493909/94‑1 (MQ=60)
         CCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCAT                                                                                     >  SRR4302532.5834938/1‑94 (MQ=60)
          CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATA                                                                                    <  SRR4302532.1010025/94‑1 (MQ=60)
          CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATA                                                                                    >  SRR4302532.2465531/1‑94 (MQ=60)
          CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATA                                                                                    <  SRR4302532.734620/94‑1 (MQ=60)
          CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCCCCGAGCAGCACAATAACAGTATCAACCATA                                                                                    <  SRR4302532.6204062/94‑1 (MQ=60)
           GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATAT                                                                                   <  SRR4302532.4433517/94‑1 (MQ=60)
           GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATAT                                                                                   <  SRR4302532.397633/94‑1 (MQ=60)
           GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATAT                                                                                   >  SRR4302532.2588572/1‑94 (MQ=60)
           GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATAT                                                                                   >  SRR4302532.4244661/1‑94 (MQ=60)
             AATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCT                                                                                 <  SRR4302532.4232302/94‑1 (MQ=60)
             AATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCT                                                                                 >  SRR4302532.5448958/1‑94 (MQ=60)
             AATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCT                                                                                 <  SRR4302532.4851342/94‑1 (MQ=60)
              ATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTA                                                                                <  SRR4302532.1020030/94‑1 (MQ=60)
               TGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTAC                                                                               <  SRR4302532.5464566/94‑1 (MQ=60)
               TGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTAC                                                                               <  SRR4302532.363832/94‑1 (MQ=60)
                 CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCC                                                                             >  SRR4302532.177027/1‑94 (MQ=60)
                 CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCC                                                                             >  SRR4302532.4963375/1‑94 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGCAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            >  SRR4302532.3584015/1‑94 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            >  SRR4302532.4135226/1‑94 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            <  SRR4302532.5703713/94‑1 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            >  SRR4302532.2654123/1‑94 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            >  SRR4302532.1166089/1‑94 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            >  SRR4302532.3083728/1‑94 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            <  SRR4302532.4646521/94‑1 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            <  SRR4302532.1819770/94‑1 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            >  SRR4302532.2110836/1‑94 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            >  SRR4302532.2078623/1‑94 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            >  SRR4302532.602289/1‑94 (MQ=60)
                  CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                            >  SRR4302532.4375622/1‑94 (MQ=60)
                  CGGGGACCTTGGCTTTAATCTGGTGATTGCCTAAGACGCCTGTAGTGCCGCCAGCCCCGAGCAACACAATAATAGCATTAATCATATCTTCCCG                                                                            <  SRR4302532.508302/94‑1 (MQ=55)
                   TGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGC                                                                           >  SRR4302532.3843549/1‑94 (MQ=60)
                   TGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGC                                                                           >  SRR4302532.5748274/1‑94 (MQ=60)
                      GAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCA                                                                        <  SRR4302532.6152755/94‑1 (MQ=60)
                       AACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCAT                                                                       >  SRR4302532.5418654/1‑94 (MQ=60)
                       AACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAT                                                                       <  SRR4302532.4614463/94‑1 (MQ=60)
                        ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATC                                                                      >  SRR4302532.2658629/1‑94 (MQ=60)
                        ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                                      >  SRR4302532.6308918/1‑94 (MQ=60)
                        ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                                      <  SRR4302532.1380595/94‑1 (MQ=60)
                        ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                                      <  SRR4302532.5994425/94‑1 (MQ=60)
                        ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                                      >  SRR4302532.5955979/1‑94 (MQ=60)
                        ACTGGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                                      <  SRR4302532.3168260/94‑1 (MQ=60)
                         CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCG                                                                     <  SRR4302532.1985569/94‑1 (MQ=60)
                         CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCG                                                                     >  SRR4302532.1626239/1‑94 (MQ=60)
                         CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                                     >  SRR4302532.4160204/1‑94 (MQ=60)
                         CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                                     >  SRR4302532.5556575/1‑94 (MQ=60)
                         CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                                     >  SRR4302532.3057643/1‑94 (MQ=60)
                         CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                                     >  SRR4302532.702871/1‑94 (MQ=60)
                            TGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCC                                                                  <  SRR4302532.4690032/94‑1 (MQ=60)
                            GGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCC                                                                  >  SRR4302532.4118690/1‑94 (MQ=60)
                            GGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCC                                                                  <  SRR4302532.1477423/94‑1 (MQ=60)
                             GCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCG                                                                 <  SRR4302532.5897807/94‑1 (MQ=60)
                             GCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCG                                                                 <  SRR4302532.54848/94‑1 (MQ=60)
                              CTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATAATATCTACCCGCGCATCGCCCGT                                                                >  SRR4302532.616994/1‑94 (MQ=60)
                               TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTG                                                               <  SRR4302532.5414499/94‑1 (MQ=60)
                               TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                               >  SRR4302532.6089919/1‑94 (MQ=60)
                               TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                               >  SRR4302532.4726272/1‑94 (MQ=60)
                               TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                               >  SRR4302532.3206351/1‑94 (MQ=60)
                                 TAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTG                                                             >  SRR4302532.1886411/1‑94 (MQ=60)
                                  AATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGC                                                            >  SRR4302532.2522712/1‑94 (MQ=60)
                                  AATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGC                                                            <  SRR4302532.5263604/94‑1 (MQ=60)
                                  AATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGC                                                            >  SRR4302532.5092495/1‑94 (MQ=60)
                                   ATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCG                                                           <  SRR4302532.5319769/94‑1 (MQ=60)
                                   ATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCG                                                           >  SRR4302532.327300/1‑94 (MQ=60)
                                    TCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGT                                                          >  SRR4302532.3787659/1‑94 (MQ=60)
                                    TCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGT                                                          >  SRR4302532.2433730/1‑94 (MQ=60)
                                    TCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGT                                                          >  SRR4302532.4550367/1‑94 (MQ=60)
                                     CTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTA                                                         <  SRR4302532.5503624/94‑1 (MQ=60)
                                      TGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAG                                                        >  SRR4302532.42835/1‑94 (MQ=60)
                                      TGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAG                                                        <  SRR4302532.4576786/94‑1 (MQ=60)
                                      TGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAG                                                        <  SRR4302532.5296422/94‑1 (MQ=60)
                                       GGTGATGGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGC                                                       <  SRR4302532.5615627/94‑1 (MQ=60)
                                        GTGATTTCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCG                                                      <  SRR4302532.294671/94‑1 (MQ=60)
                                        GTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCG                                                      >  SRR4302532.2418223/1‑94 (MQ=60)
                                          GATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTG                                                    <  SRR4302532.1966440/94‑1 (MQ=60)
                                          GATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTG                                                    >  SRR4302532.976222/1‑94 (MQ=60)
                                           ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                                   >  SRR4302532.1536866/1‑94 (MQ=60)
                                           ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                                   >  SRR4302532.4071364/1‑94 (MQ=60)
                                           ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                                   <  SRR4302532.6231705/94‑1 (MQ=60)
                                            TTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGA                                                  <  SRR4302532.5074329/94‑1 (MQ=60)
                                            TTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGA                                                  <  SRR4302532.5730523/94‑1 (MQ=60)
                                             TGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAA                                                 <  SRR4302532.5267885/94‑1 (MQ=60)
                                              GCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAG                                                <  SRR4302532.6340860/94‑1 (MQ=60)
                                               CCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGA                                               >  SRR4302532.5585901/1‑94 (MQ=60)
                                               CCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGA                                               >  SRR4302532.52499/1‑94 (MQ=60)
                                                CGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                              >  SRR4302532.5789882/1‑94 (MQ=60)
                                                CGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                              >  SRR4302532.1516644/1‑94 (MQ=60)
                                                 GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                             >  SRR4302532.3730478/1‑94 (MQ=60)
                                                 GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                             <  SRR4302532.1892474/94‑1 (MQ=60)
                                                 GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                             >  SRR4302532.3680088/1‑94 (MQ=60)
                                                 GAAGACGCCTGTAATGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATTGCCCGCGCGCGTAGCGTGGAAGAGA                                             >  SRR4302532.3487338/1‑94 (MQ=60)
                                                  AAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGAT                                            >  SRR4302532.3429301/1‑94 (MQ=60)
                                                   AGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATC                                           >  SRR4302532.5460299/1‑94 (MQ=60)
                                                    GACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCC                                          <  SRR4302532.684037/94‑1 (MQ=60)
                                                    GACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCC                                          <  SRR4302532.1329441/94‑1 (MQ=60)
                                                     ACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCT                                         <  SRR4302532.5200343/94‑1 (MQ=60)
                                                      CGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTC                                        >  SRR4302532.1212686/1‑94 (MQ=60)
                                                      CGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTC                                        <  SRR4302532.3042041/94‑1 (MQ=60)
                                                       GCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCA                                       >  SRR4302532.2781387/1‑94 (MQ=60)
                                                        CCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGAGTGCGTAGGGTGGAAGAGATCCTCAC                                      >  SRR4302532.2260190/1‑94 (MQ=60)
                                                        CCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtca                                      >  SRR4302532.74938/1‑91 (MQ=60)
                                                         CTGTAGTGCCGCCAGCGCGGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                                     <  SRR4302532.1144326/94‑5 (MQ=60)
                                                         CTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGAGGAAGAGATCCTCAAC                                     >  SRR4302532.2548310/1‑94 (MQ=60)
                                                         CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                                     >  SRR4302532.5007682/1‑90 (MQ=60)
                                                         CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                                     <  SRR4302532.1093416/94‑5 (MQ=60)
                                                          TGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACG                                    <  SRR4302532.1460401/94‑1 (MQ=60)
                                                          TGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcacg                                    >  SRR4302532.6166835/1‑89 (MQ=60)
                                                          TGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcacg                                    >  SRR4302532.1070950/1‑89 (MQ=60)
                                                           GTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGC                                   >  SRR4302532.1866429/1‑94 (MQ=60)
                                                            TAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCG                                  <  SRR4302532.3436645/94‑1 (MQ=60)
                                                             AGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGT                                 >  SRR4302532.5493413/1‑94 (MQ=60)
                                                             AGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGT                                 >  SRR4302532.4871964/1‑94 (MQ=60)
                                                              GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                                >  SRR4302532.1250880/1‑94 (MQ=60)
                                                              GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                                >  SRR4302532.3325655/1‑94 (MQ=60)
                                                              GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                                >  SRR4302532.379354/1‑94 (MQ=60)
                                                                GCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTAT                              <  SRR4302532.3622576/94‑1 (MQ=60)
                                                                GCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTAT                              <  SRR4302532.3118758/94‑1 (MQ=60)
                                                                GCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTAT                              <  SRR4302532.274178/94‑1 (MQ=60)
                                                                 CCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATG                             <  SRR4302532.2519201/94‑1 (MQ=60)
                                                                  CGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGA                            >  SRR4302532.1692895/1‑94 (MQ=60)
                                                                  CGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCATGGAAGAGATCCTTCACGCGTTATGA                            <  SRR4302532.5655130/94‑1 (MQ=60)
                                                                   GCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAT                           >  SRR4302532.2785004/1‑94 (MQ=60)
                                                                   GCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                           >  SRR4302532.4271290/1‑94 (MQ=60)
                                                                   GCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                           <  SRR4302532.4721262/94‑1 (MQ=60)
                                                                   GCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                           <  SRR4302532.3517947/94‑1 (MQ=60)
                                                                    CCAGGACCGAGCAACACAATAACAGCATTAATCATATCTCCCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATT                          <  SRR4302532.1702719/94‑1 (MQ=60)
                                                                    CCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATT                          >  SRR4302532.3853352/1‑94 (MQ=60)
                                                                     CAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTT                         <  SRR4302532.3007296/94‑1 (MQ=60)
                                                                     CAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTT                         <  SRR4302532.3251443/94‑1 (MQ=60)
                                                                     CAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTT                         <  SRR4302532.202534/94‑1 (MQ=60)
                                                                      AGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTA                        >  SRR4302532.3944125/1‑94 (MQ=60)
                                                                       GCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTAC                       >  SRR4302532.2833215/1‑94 (MQ=60)
                                                                        CGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTGGCGTGGAAGAGATCCTTCACGCGTTATGATTTACA                      >  SRR4302532.3278282/1‑94 (MQ=60)
                                                                         GCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACAT                     <  SRR4302532.2688726/94‑1 (MQ=60)
                                                                         GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT                     >  SRR4302532.2625569/1‑94 (MQ=60)
                                                                         GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT                     <  SRR4302532.3496666/94‑1 (MQ=60)
                                                                         GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT                     >  SRR4302532.2185105/1‑94 (MQ=60)
                                                                         GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT                     >  SRR4302532.376588/1‑94 (MQ=60)
                                                                         GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT                     <  SRR4302532.2007270/94‑1 (MQ=60)
                                                                          CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC                    <  SRR4302532.1399820/94‑1 (MQ=60)
                                                                          CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC                    >  SRR4302532.5643800/1‑94 (MQ=60)
                                                                          CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC                    <  SRR4302532.498797/94‑1 (MQ=60)
                                                                           CGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCG                   >  SRR4302532.4677945/1‑94 (MQ=60)
                                                                           CGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCG                   >  SRR4302532.3470273/1‑94 (MQ=60)
                                                                            GAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGG                  >  SRR4302532.2066704/1‑94 (MQ=60)
                                                                            GAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGG                  <  SRR4302532.523701/94‑1 (MQ=60)
                                                                            GAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGG                  <  SRR4302532.799643/94‑1 (MQ=60)
                                                                             aacaaCACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGT                 >  SRR4302532.5367295/6‑94 (MQ=60)
                                                                             AGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGT                 <  SRR4302532.370048/94‑1 (MQ=60)
                                                                              GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC                <  SRR4302532.3410508/94‑1 (MQ=60)
                                                                              GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC                <  SRR4302532.814007/94‑1 (MQ=60)
                                                                              GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC                <  SRR4302532.1427292/94‑1 (MQ=60)
                                                                               CAGCACAATAACAGTATCAACCATATCTCCCCGCGCATCGCCCGTGTGCGTAGCGTGTAAGAGATCCTCAACGCGTTATGATTTACATCGGTCT               <  SRR4302532.2896001/94‑1 (MQ=60)
                                                                               CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT               >  SRR4302532.6295031/1‑94 (MQ=60)
                                                                               CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT               <  SRR4302532.6045117/94‑1 (MQ=60)
                                                                               CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT               <  SRR4302532.1035500/94‑1 (MQ=60)
                                                                               CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT               <  SRR4302532.2278272/94‑1 (MQ=60)
                                                                               CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT               >  SRR4302532.2610592/1‑94 (MQ=60)
                                                                               CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT               <  SRR4302532.2902915/94‑1 (MQ=60)
                                                                               CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT               <  SRR4302532.4402225/94‑1 (MQ=60)
                                                                                ACCACAATAACAGCATTAATCATATCTACCCGCGCATCCCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG              <  SRR4302532.4823087/94‑1 (MQ=60)
                                                                                AACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG              <  SRR4302532.2147589/94‑1 (MQ=60)
                                                                                 GCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTAC             >  SRR4302532.284743/1‑94 (MQ=60)
                                                                                 ACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGC             >  SRR4302532.1619572/1‑94 (MQ=60)
                                                                                 ACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGC             >  SRR4302532.3554623/1‑94 (MQ=60)
                                                                                  CACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACC            <  SRR4302532.5147449/94‑1 (MQ=60)
                                                                                   ACAATAACAGCATTACTCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGCTTTACATCGGTCTACCG           <  SRR4302532.5671242/94‑1 (MQ=60)
                                                                                   ACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCG           >  SRR4302532.5622384/1‑94 (MQ=60)
                                                                                   ACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCG           >  SRR4302532.658959/1‑94 (MQ=60)
                                                                                   ACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCG           >  SRR4302532.4269386/1‑94 (MQ=60)
                                                                                   ACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCG           <  SRR4302532.5569919/94‑1 (MQ=60)
                                                                                    CAATAGCAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGC          >  SRR4302532.5437095/1‑94 (MQ=60)
                                                                                    CAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGC          >  SRR4302532.6109590/1‑94 (MQ=60)
                                                                                    CAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGC          >  SRR4302532.6265029/1‑94 (MQ=60)
                                                                                    CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC          >  SRR4302532.5978334/1‑94 (MQ=60)
                                                                                    CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC          >  SRR4302532.2382428/1‑94 (MQ=60)
                                                                                    CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC          >  SRR4302532.2573660/1‑94 (MQ=60)
                                                                                     AATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCA         >  SRR4302532.4630854/1‑94 (MQ=60)
                                                                                     AATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCA         >  SRR4302532.4320926/1‑94 (MQ=60)
                                                                                     AATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCA         >  SRR4302532.3450472/1‑94 (MQ=60)
                                                                                     AATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCA         >  SRR4302532.5905133/1‑94 (MQ=60)
                                                                                     AATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCA         >  SRR4302532.2351538/1‑94 (MQ=60)
                                                                                      ATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAA        >  SRR4302532.112977/1‑94 (MQ=60)
                                                                                      ATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAA        >  SRR4302532.2219381/1‑94 (MQ=60)
                                                                                       TAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAAT       >  SRR4302532.5379355/1‑94 (MQ=60)
                                                                                        AACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATG      <  SRR4302532.5803523/94‑1 (MQ=60)
                                                                                         ACAGCATTAATCATATCTACCCGCGCATCGCTCGTGTGCGTAGGGTGGAAGAATTCCTTCACGCGTTATGATTTACATCGGTCTgcctcaattg     <  SRR4302532.4447564/94‑11 (MQ=44)
                                                                                         ACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGG     >  SRR4302532.4198323/1‑94 (MQ=60)
                                                                                         ACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGG     >  SRR4302532.5125703/1‑94 (MQ=60)
                                                                                            GTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCG  <  SRR4302532.5765990/94‑1 (MQ=60)
                                                                                             |                                                                                            
ATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCG  >  NC_000913/1949263‑1949448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: