Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,949,362 C→T N180N (AAC→AAT yecD → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,949,3620CT76.0% 1836.6 / inf 897N180N (AAC→AATyecDhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (109/106);  new base T (385/297);  total (494/403)
Fisher's exact test for biased strand distribution p-value = 1.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.18e-02

Only 100 of 917 total aligned reads displayed.

GCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCT  >  NC_000913/1949270‑1949454
                                                                                            |                                                                                            
ccccgcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAAc                                                                                              <  1:694507/92‑1 (MQ=255)
   cgcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCat                                                                                           >  2:5893710/1‑93 (MQ=255)
    gcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTCCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCata                                                                                          >  2:5272879/1‑93 (MQ=255)
     cAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCatat                                                                                         >  2:1779644/1‑93 (MQ=255)
     cAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGAAACACAATAACAGCATTAATCatat                                                                                         <  2:1185376/93‑1 (MQ=255)
      aaTGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATc                                                                                        <  1:2084886/93‑1 (MQ=255)
      aaTGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATc                                                                                        <  2:3394762/93‑1 (MQ=255)
       aTGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCt                                                                                       >  1:5267323/1‑93 (MQ=255)
       aTGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCt                                                                                       >  1:4131166/1‑93 (MQ=255)
        tGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTa                                                                                      <  1:351660/93‑1 (MQ=255)
          ccTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTAcc                                                                                    <  2:4672592/93‑1 (MQ=255)
            tGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCcg                                                                                  >  1:4233484/1‑93 (MQ=255)
            tGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCcg                                                                                  >  2:1109606/1‑93 (MQ=255)
              ggAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCcgcg                                                                                >  2:412572/1‑93 (MQ=255)
                 aCTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAt                                                                             <  2:919030/93‑1 (MQ=255)
                  cTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATc                                                                            <  2:2732710/93‑1 (MQ=255)
                  cTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATc                                                                            <  2:4381874/93‑1 (MQ=255)
                  cTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATc                                                                            >  1:5755641/1‑93 (MQ=255)
                  cTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATc                                                                            >  1:4466487/1‑93 (MQ=255)
                  cTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATc                                                                            <  1:1589987/93‑1 (MQ=255)
                   ttGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCg                                                                           >  1:2959608/1‑93 (MQ=255)
                    tGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGc                                                                          >  2:4589010/1‑93 (MQ=255)
                     ggCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGcc                                                                         >  2:2379077/1‑93 (MQ=255)
                     ggCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGcc                                                                         >  2:4879764/1‑93 (MQ=255)
                     ggCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGcc                                                                         <  1:1095881/93‑1 (MQ=255)
                       cTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCg                                                                       >  1:3177059/1‑93 (MQ=255)
                        tttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgt                                                                      >  1:5937186/1‑93 (MQ=255)
                        tttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgt                                                                      >  1:4714804/1‑93 (MQ=255)
                        tttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgt                                                                      <  2:1729325/93‑1 (MQ=255)
                         ttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgtg                                                                     >  1:3103434/1‑93 (MQ=255)
                         ttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgtg                                                                     <  2:5643397/93‑1 (MQ=255)
                          tAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgtgt                                                                    <  2:4263726/93‑1 (MQ=255)
                           aaTCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGtgtg                                                                   <  2:4218293/93‑1 (MQ=255)
                           aaTCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGtgtg                                                                   <  1:3356677/93‑1 (MQ=255)
                              cTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGt                                                                <  1:253624/93‑1 (MQ=255)
                               tGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTa                                                               <  1:5120298/93‑1 (MQ=255)
                                 gTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGc                                                             <  2:4789998/93‑1 (MQ=255)
                                    aTTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTg                                                          >  2:5150261/1‑93 (MQ=255)
                                    aTTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTg                                                          <  1:6023674/93‑1 (MQ=255)
                                     ttGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTgg                                                         >  1:200018/1‑93 (MQ=255)
                                     ttGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTgg                                                         >  2:1902838/1‑93 (MQ=255)
                                     ttGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTgg                                                         >  2:2808102/1‑93 (MQ=255)
                                     ttGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTgg                                                         >  1:3938644/1‑93 (MQ=255)
                                     ttGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTgg                                                         <  1:3408625/93‑1 (MQ=255)
                                       gCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGaa                                                       >  2:1501410/1‑93 (MQ=255)
                                       gCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGaa                                                       <  1:5397139/93‑1 (MQ=255)
                                       gCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGaa                                                       <  1:6129361/93‑1 (MQ=255)
                                        ccGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAag                                                      <  1:2350647/93‑1 (MQ=255)
                                         cGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAaga                                                     <  2:2051199/93‑1 (MQ=255)
                                          gAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAagag                                                    >  1:1467214/1‑93 (MQ=255)
                                          gAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAagag                                                    <  2:4003512/93‑1 (MQ=255)
                                          gAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAagag                                                    >  1:4309678/1‑93 (MQ=255)
                                           aaGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAgaga                                                   >  1:3609794/1‑93 (MQ=255)
                                           aaGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAgaga                                                   >  1:563793/1‑93 (MQ=255)
                                             gACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATc                                                 <  2:2948630/93‑1 (MQ=255)
                                             gACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATc                                                 <  2:2880829/93‑1 (MQ=255)
                                              aCGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATcc                                                >  1:859418/1‑93 (MQ=255)
                                                 ccTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCttc                                             >  1:1360743/1‑91 (MQ=255)
                                                  cTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCttca                                            >  2:5535945/1‑90 (MQ=255)
                                                   tGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGAGGAAGAGATCCTCAAc                                           >  1:2466212/1‑93 (MQ=255)
                                                   tGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGCGCGTAGCGTGGAAGAGATCCttcac                                           >  2:258248/1‑89 (MQ=255)
                                                    gTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAAcg                                          >  2:1409311/1‑93 (MQ=255)
                                                     tAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCAcgc                                         >  1:1806144/1‑93 (MQ=255)
                                                       gTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGt                                       >  1:5309802/1‑93 (MQ=255)
                                                       gTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGt                                       >  2:1358173/1‑93 (MQ=255)
                                                        tGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGtt                                      >  1:1210387/1‑93 (MQ=255)
                                                            gccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGa                                  <  1:4565547/93‑1 (MQ=255)
                                                             ccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAt                                 >  2:768405/1‑93 (MQ=255)
                                                             ccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAt                                 >  2:6023301/1‑93 (MQ=255)
                                                             ccAGCGCCGAGCAACACAATAACAGCATTAATAATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAt                                 >  1:5220351/1‑93 (MQ=255)
                                                              cAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAtt                                <  1:4828678/93‑1 (MQ=255)
                                                              cAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAtt                                >  2:823686/1‑93 (MQ=255)
                                                              cAGCGCCGAGCACCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAtt                                <  1:2724303/93‑1 (MQ=255)
                                                                  gcCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACa                            <  1:2601737/93‑1 (MQ=255)
                                                                  gcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACa                            <  2:381149/93‑1 (MQ=255)
                                                                   ccGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAt                           <  2:5856509/93‑1 (MQ=255)
                                                                   ccGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAt                           <  1:3727772/93‑1 (MQ=255)
                                                                   ccGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAt                           >  1:1917401/1‑93 (MQ=255)
                                                                    cGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATc                          >  1:5454726/1‑93 (MQ=255)
                                                                     gAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCg                         <  1:506008/93‑1 (MQ=255)
                                                                       gcagcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGt                       >  2:1635667/1‑93 (MQ=255)
                                                                       gcaacaCAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGt                       >  2:5055400/1‑93 (MQ=255)
                                                                        cagcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTc                      <  2:5443688/93‑1 (MQ=255)
                                                                        caacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTc                      <  1:1001413/90‑1 (MQ=255)
                                                                        caacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTc                      <  1:2204931/90‑1 (MQ=255)
                                                                        caacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTc                      <  1:2808857/90‑1 (MQ=255)
                                                                        caacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTc                      <  2:1006060/90‑1 (MQ=255)
                                                                         aacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCt                     <  2:64237/91‑1 (MQ=255)
                                                                         aacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCt                     <  1:4932983/91‑1 (MQ=255)
                                                                          gcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTa                    >  2:3279564/1‑93 (MQ=255)
                                                                          gcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTa                    >  2:3146011/1‑93 (MQ=255)
                                                                            acaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGcc                  >  2:128708/1‑93 (MQ=255)
                                                                                tAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCaa              <  2:3704482/93‑1 (MQ=255)
                                                                                tAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCaa              >  2:3568795/1‑93 (MQ=255)
                                                                                tAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCaa              <  2:5720040/93‑1 (MQ=255)
                                                                                   cAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATgg           >  1:4061814/1‑93 (MQ=255)
                                                                                    aGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGt          <  2:449553/93‑1 (MQ=255)
                                                                                      tATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCg        >  1:5550669/1‑93 (MQ=255)
                                                                                       aTCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGc       >  2:2161611/1‑93 (MQ=255)
                                                                                        tCAGCCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCa      <  1:5837806/93‑1 (MQ=255)
                                                                                            |                                                                                            
GCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCT  >  NC_000913/1949270‑1949454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 491 total aligned reads displayed.
GCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTA  >  NC_000913/1949270‑1949455
                                                                                            |                                                                                             
 CCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCA                                                                                             <  SRR4302532.5281964/94‑1 (MQ=60)
   CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATA                                                                                           >  SRR4302532.4287181/1‑94 (MQ=60)
   CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATA                                                                                           <  SRR4302532.1010025/94‑1 (MQ=60)
   CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATA                                                                                           <  SRR4302532.734620/94‑1 (MQ=60)
   CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATA                                                                                           >  SRR4302532.2465531/1‑94 (MQ=60)
   CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATA                                                                                           <  SRR4302532.3442444/94‑1 (MQ=60)
   CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCCCCGAGCAGCACAATAACAGTATCAACCATA                                                                                           <  SRR4302532.6204062/94‑1 (MQ=60)
    GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATAT                                                                                          <  SRR4302532.4433517/94‑1 (MQ=60)
    GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATAT                                                                                          >  SRR4302532.2588572/1‑94 (MQ=60)
    GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATAT                                                                                          <  SRR4302532.397633/94‑1 (MQ=60)
    GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATAT                                                                                          >  SRR4302532.4244661/1‑94 (MQ=60)
    GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATAT                                                                                          >  SRR4302532.5861864/1‑94 (MQ=60)
     CAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATC                                                                                         <  SRR4302532.5636334/94‑1 (MQ=60)
     CAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATC                                                                                         >  SRR4302532.2065033/1‑94 (MQ=60)
      AATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCT                                                                                        >  SRR4302532.5461883/1‑94 (MQ=60)
       ATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTA                                                                                       <  SRR4302532.1020030/94‑1 (MQ=60)
        TGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTAC                                                                                      <  SRR4302532.4952728/94‑1 (MQ=60)
         GCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACC                                                                                     >  SRR4302532.5616857/1‑94 (MQ=60)
          CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCC                                                                                    >  SRR4302532.4135767/1‑94 (MQ=60)
          CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCC                                                                                    >  SRR4302532.5466985/1‑94 (MQ=60)
          CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCC                                                                                    <  SRR4302532.3647437/94‑1 (MQ=60)
          CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCC                                                                                    >  SRR4302532.4963375/1‑94 (MQ=60)
           CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCG                                                                                   >  SRR4302532.5423968/1‑94 (MQ=60)
           CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                                   <  SRR4302532.4646521/94‑1 (MQ=60)
           CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                                   >  SRR4302532.2078623/1‑94 (MQ=60)
           CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                                   >  SRR4302532.2314776/1‑94 (MQ=60)
           CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                                   >  SRR4302532.3495587/1‑94 (MQ=60)
           CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                                   >  SRR4302532.1166089/1‑94 (MQ=60)
           CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCACAGCCGAGAAACACAATAACAGCATTAATCATATCCACCCG                                                                                   >  SRR4302532.602288/1‑94 (MQ=60)
            TGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGC                                                                                  >  SRR4302532.3843549/1‑94 (MQ=60)
              GGAACTTGGATTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGC                                                                                >  SRR4302532.271712/1‑94 (MQ=60)
               GAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCA                                                                               <  SRR4302532.6152755/94‑1 (MQ=60)
                AACTTGGCTTTAATCTGGTGATTGCCGAAGACTCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAT                                                                              <  SRR4302532.4680042/94‑1 (MQ=60)
                AACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAT                                                                              <  SRR4302532.2114168/94‑1 (MQ=60)
                 ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATC                                                                             >  SRR4302532.2658628/1‑94 (MQ=60)
                 ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                                             <  SRR4302532.5994425/94‑1 (MQ=60)
                 ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                                             <  SRR4302532.1380595/94‑1 (MQ=60)
                 ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                                             >  SRR4302532.1872675/1‑94 (MQ=60)
                  CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCG                                                                            <  SRR4302532.1985569/94‑1 (MQ=60)
                  CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                                            >  SRR4302532.5556575/1‑94 (MQ=60)
                  CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                                            >  SRR4302532.702871/1‑94 (MQ=60)
                  CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                                            >  SRR4302532.3057643/1‑94 (MQ=60)
                  CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                                            <  SRR4302532.1643812/94‑1 (MQ=60)
                  CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                                            >  SRR4302532.4160204/1‑94 (MQ=60)
                   TTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGC                                                                           >  SRR4302532.5260955/1‑94 (MQ=60)
                     GGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCC                                                                         >  SRR4302532.4118690/1‑94 (MQ=60)
                     GGCTTTAATCTGGTGATCGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGGGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCC                                                                         <  SRR4302532.1477422/94‑1 (MQ=60)
                      GCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCG                                                                        <  SRR4302532.1335442/94‑1 (MQ=60)
                      GCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCG                                                                        >  SRR4302532.3282563/1‑94 (MQ=60)
                       CTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGT                                                                       <  SRR4302532.3585296/94‑1 (MQ=60)
                       CTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGT                                                                       >  SRR4302532.4875672/1‑94 (MQ=60)
                       CTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATAATATCTACCCGCGCATCGCCCGT                                                                       >  SRR4302532.616993/1‑94 (MQ=60)
                        TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTG                                                                      <  SRR4302532.5414499/94‑1 (MQ=60)
                        TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                                      >  SRR4302532.3206351/1‑94 (MQ=60)
                        TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                                      >  SRR4302532.3116339/1‑94 (MQ=60)
                        TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                                      >  SRR4302532.4726272/1‑94 (MQ=60)
                        TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                                      >  SRR4302532.5077071/1‑94 (MQ=60)
                        TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                                      >  SRR4302532.5162289/1‑94 (MQ=60)
                        TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                                      >  SRR4302532.5519363/1‑94 (MQ=60)
                        TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                                      >  SRR4302532.6089919/1‑94 (MQ=60)
                         TTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGT                                                                     <  SRR4302532.4359717/94‑1 (MQ=60)
                          TAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCACCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTG                                                                    >  SRR4302532.6113239/1‑94 (MQ=60)
                           AATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGC                                                                   >  SRR4302532.2522712/1‑94 (MQ=60)
                           AATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGC                                                                   >  SRR4302532.5092495/1‑94 (MQ=60)
                            ATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGCGCAACACAATAACAGCATTAATCATATCTACCCGCGCACCGCCCGTGTGCG                                                                  >  SRR4302532.4862679/1‑94 (MQ=60)
                            ATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCG                                                                  >  SRR4302532.2832152/1‑94 (MQ=60)
                            ATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCG                                                                  >  SRR4302532.4493647/1‑94 (MQ=60)
                            ATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCG                                                                  >  SRR4302532.1731150/1‑94 (MQ=60)
                             TCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGT                                                                 >  SRR4302532.3787659/1‑94 (MQ=60)
                             TCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGT                                                                 >  SRR4302532.795200/1‑94 (MQ=60)
                             TCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGT                                                                 >  SRR4302532.2433730/1‑94 (MQ=60)
                              CTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTA                                                                >  SRR4302532.6029447/1‑94 (MQ=60)
                              CTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTA                                                                >  SRR4302532.984576/1‑94 (MQ=60)
                               TGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAG                                                               <  SRR4302532.4576786/94‑1 (MQ=60)
                               TGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAG                                                               <  SRR4302532.5296422/94‑1 (MQ=60)
                                GGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGC                                                              <  SRR4302532.3483788/94‑1 (MQ=60)
                                 GTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCG                                                             <  SRR4302532.5714877/94‑1 (MQ=60)
                                 GTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCG                                                             >  SRR4302532.2418223/1‑94 (MQ=60)
                                    ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                                          <  SRR4302532.5601914/94‑1 (MQ=60)
                                    ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                                          <  SRR4302532.6231705/94‑1 (MQ=60)
                                    ATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGG                                                          >  SRR4302532.4071364/1‑94 (MQ=60)
                                     TTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGA                                                         <  SRR4302532.5730523/94‑1 (MQ=60)
                                     TTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGA                                                         <  SRR4302532.545051/94‑1 (MQ=60)
                                      TGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAA                                                        <  SRR4302532.5267885/94‑1 (MQ=60)
                                       GCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAG                                                       <  SRR4302532.6340860/94‑1 (MQ=60)
                                       GCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAG                                                       <  SRR4302532.5244350/94‑1 (MQ=60)
                                       GCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAG                                                       <  SRR4302532.5584142/94‑1 (MQ=60)
                                         CGAAGACGCGTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTGCCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                                     <  SRR4302532.5702415/94‑1 (MQ=60)
                                         CGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                                     >  SRR4302532.4388833/1‑94 (MQ=60)
                                          GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                                    <  SRR4302532.1892474/94‑1 (MQ=60)
                                          GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                                    <  SRR4302532.5646741/94‑1 (MQ=60)
                                          GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                                    >  SRR4302532.3680088/1‑94 (MQ=60)
                                          GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                                    >  SRR4302532.583462/1‑94 (MQ=60)
                                          GAAGACGCCTGTAGGGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                                    <  SRR4302532.2940463/94‑1 (MQ=60)
                                           AAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGAT                                                   <  SRR4302532.3514283/94‑1 (MQ=60)
                                           AAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGAT                                                   >  SRR4302532.3429301/1‑94 (MQ=60)
                                            AGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATC                                                  >  SRR4302532.4991627/1‑94 (MQ=60)
                                            AGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATC                                                  <  SRR4302532.5140889/94‑1 (MQ=60)
                                             GACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCC                                                 >  SRR4302532.888934/1‑94 (MQ=60)
                                             GACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCC                                                 <  SRR4302532.684037/94‑1 (MQ=60)
                                              ACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCT                                                <  SRR4302532.5200343/94‑1 (MQ=60)
                                              ACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCT                                                <  SRR4302532.5325679/94‑1 (MQ=60)
                                               CGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTC                                               <  SRR4302532.3042041/94‑1 (MQ=60)
                                                GCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtc                                              >  SRR4302532.1406317/1‑92 (MQ=60)
                                                GCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtc                                              <  SRR4302532.5397169/94‑3 (MQ=60)
                                                 CCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtca                                             <  SRR4302532.5967746/94‑4 (MQ=60)
                                                 CCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtca                                             >  SRR4302532.2157848/1‑91 (MQ=60)
                                                 CCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtca                                             >  SRR4302532.74938/1‑91 (MQ=60)
                                                 CCTGTAGTGCCGCCAGCGCAGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAA                                             >  SRR4302532.1526073/1‑94 (MQ=60)
                                                  CTGTAGTGCCGCCAGCGCGGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                                            <  SRR4302532.1144326/94‑5 (MQ=60)
                                                  CTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGAGGAAGAGATCCTCAAC                                            >  SRR4302532.2548310/1‑94 (MQ=60)
                                                  CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                                            <  SRR4302532.1093416/94‑5 (MQ=60)
                                                  CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                                            >  SRR4302532.5490375/1‑90 (MQ=60)
                                                  CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                                            >  SRR4302532.5122837/1‑90 (MQ=60)
                                                  CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                                            >  SRR4302532.5007682/1‑90 (MQ=60)
                                                   TGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACG                                           >  SRR4302532.2883301/1‑94 (MQ=60)
                                                   TGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcacg                                           >  SRR4302532.2001283/1‑89 (MQ=60)
                                                   TGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcacg                                           >  SRR4302532.1070950/1‑89 (MQ=60)
                                                      AGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGT                                        >  SRR4302532.4198628/1‑94 (MQ=60)
                                                      AGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGT                                        >  SRR4302532.5493413/1‑94 (MQ=60)
                                                       GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                                       >  SRR4302532.1250880/1‑94 (MQ=60)
                                                       GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                                       >  SRR4302532.3276029/1‑94 (MQ=60)
                                                       GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                                       >  SRR4302532.2505157/1‑94 (MQ=60)
                                                        TGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTA                                      >  SRR4302532.4278083/1‑94 (MQ=60)
                                                         GCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTAT                                     <  SRR4302532.3622576/94‑1 (MQ=60)
                                                          CCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATG                                    <  SRR4302532.3260807/94‑1 (MQ=60)
                                                            GCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAT                                  <  SRR4302532.3857249/94‑1 (MQ=60)
                                                            GCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAT                                  >  SRR4302532.2785004/1‑94 (MQ=60)
                                                             CCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATT                                 <  SRR4302532.1702718/94‑1 (MQ=60)
                                                              CAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTT                                <  SRR4302532.3007296/94‑1 (MQ=60)
                                                              CAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTT                                <  SRR4302532.3251443/94‑1 (MQ=60)
                                                              CAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTT                                <  SRR4302532.202534/94‑1 (MQ=60)
                                                               AGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTA                               >  SRR4302532.1581609/1‑94 (MQ=60)
                                                               AGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTA                               >  SRR4302532.3944125/1‑94 (MQ=60)
                                                               AGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTA                               <  SRR4302532.5785222/94‑1 (MQ=60)
                                                                 CGCTGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACA                             >  SRR4302532.5657649/1‑94 (MQ=60)
                                                                 CGCCGAGCAGCACAATAACAGTAACAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACA                             <  SRR4302532.1844106/94‑1 (MQ=60)
                                                                  GCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACAT                            <  SRR4302532.22570/94‑1 (MQ=60)
                                                                  GCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACAT                            <  SRR4302532.2688726/94‑1 (MQ=60)
                                                                  GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT                            <  SRR4302532.3444488/94‑1 (MQ=60)
                                                                  GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT                            >  SRR4302532.2577474/1‑94 (MQ=60)
                                                                  GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT                            >  SRR4302532.2625569/1‑94 (MQ=60)
                                                                  GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT                            >  SRR4302532.376588/1‑94 (MQ=60)
                                                                   CCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATC                           <  SRR4302532.5900716/94‑1 (MQ=60)
                                                                   CCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATC                           >  SRR4302532.4705864/1‑94 (MQ=60)
                                                                   CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC                           <  SRR4302532.1399820/94‑1 (MQ=60)
                                                                   CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC                           >  SRR4302532.637273/1‑94 (MQ=60)
                                                                    CGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCG                          <  SRR4302532.1220134/94‑1 (MQ=60)
                                                                    CGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCG                          >  SRR4302532.3470273/1‑94 (MQ=60)
                                                                     GAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGG                         >  SRR4302532.3837028/1‑94 (MQ=60)
                                                                      aacaaCACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGT                        >  SRR4302532.5367295/6‑94 (MQ=60)
                                                                      AGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGT                        <  SRR4302532.802439/94‑1 (MQ=60)
                                                                      AGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGT                        <  SRR4302532.370048/94‑1 (MQ=60)
                                                                       GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC                       <  SRR4302532.1427292/94‑1 (MQ=60)
                                                                       GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC                       <  SRR4302532.1927898/94‑1 (MQ=60)
                                                                       GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC                       <  SRR4302532.3410508/94‑1 (MQ=60)
                                                                        CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT                      <  SRR4302532.1035500/94‑1 (MQ=60)
                                                                        CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT                      <  SRR4302532.2902915/94‑1 (MQ=60)
                                                                        CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT                      >  SRR4302532.6295031/1‑94 (MQ=60)
                                                                        CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT                      <  SRR4302532.2278272/94‑1 (MQ=60)
                                                                        CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT                      >  SRR4302532.2610592/1‑94 (MQ=60)
                                                                         ACCACAATAACAGCATTAATCATATCTACCCGCGCATCCCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG                     <  SRR4302532.4823087/94‑1 (MQ=60)
                                                                         AACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG                     >  SRR4302532.604592/1‑94 (MQ=60)
                                                                         AACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG                     >  SRR4302532.4615047/1‑94 (MQ=60)
                                                                         AACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG                     <  SRR4302532.2147589/94‑1 (MQ=60)
                                                                          GCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTAC                    >  SRR4302532.284743/1‑94 (MQ=60)
                                                                          ACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGC                    >  SRR4302532.3554623/1‑94 (MQ=60)
                                                                          ACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGC                    >  SRR4302532.1619573/1‑94 (MQ=60)
                                                                            ACAATAACAGTATCAACCATATCTACCCGCGCCTCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCG                  >  SRR4302532.3094497/1‑94 (MQ=60)
                                                                            ACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCG                  >  SRR4302532.6186121/1‑94 (MQ=60)
                                                                             CAATAGCAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGC                 >  SRR4302532.5437095/1‑94 (MQ=60)
                                                                             CAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGC                 >  SRR4302532.6265029/1‑94 (MQ=60)
                                                                             CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC                 >  SRR4302532.630624/1‑94 (MQ=60)
                                                                             CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC                 >  SRR4302532.2382428/1‑94 (MQ=60)
                                                                              AATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCA                >  SRR4302532.4630854/1‑94 (MQ=60)
                                                                              AATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCA                >  SRR4302532.3140772/1‑94 (MQ=60)
                                                                              AATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCA                >  SRR4302532.5939862/1‑94 (MQ=60)
                                                                               ATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAA               >  SRR4302532.112977/1‑94 (MQ=60)
                                                                               ATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAA               >  SRR4302532.2219381/1‑94 (MQ=60)
                                                                                TAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAAT              <  SRR4302532.1801101/94‑1 (MQ=60)
                                                                                 AACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATG             <  SRR4302532.5803523/94‑1 (MQ=60)
                                                                                  ACAGCATTAATCATATCTACCCGCGCATCGCTCGTGTGCGTAGGGTGGAAGAATTCCTTCACGCGTTATGATTTACATCGGTCTgcctcaattg            <  SRR4302532.4447564/94‑11 (MQ=44)
                                                                                  ACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGG            >  SRR4302532.4198323/1‑94 (MQ=60)
                                                                                    AGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTC          <  SRR4302532.4258717/94‑1 (MQ=60)
                                                                                    AGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTC          >  SRR4302532.3537783/1‑94 (MQ=60)
                                                                                     GTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCG         <  SRR4302532.5765990/94‑1 (MQ=60)
                                                                                       ATTAATCATATCTACCCGTGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCA       <  SRR4302532.4270331/94‑1 (MQ=60)
                                                                                       ATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCG       >  SRR4302532.2680263/1‑94 (MQ=60)
                                                                                       ATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCA       >  SRR4302532.3380456/1‑94 (MQ=60)
                                                                                        TCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCAT      <  SRR4302532.1470215/94‑1 (MQ=60)
                                                                                         CAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATC     <  SRR4302532.5089596/94‑1 (MQ=60)
                                                                                          AACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCC    >  SRR4302532.4550378/1‑94 (MQ=60)
                                                                                           ATCATATCTCCCCGCGCATCTCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT   <  SRR4302532.2755061/94‑1 (MQ=60)
                                                                                           ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT   <  SRR4302532.3637223/94‑1 (MQ=60)
                                                                                           ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT   >  SRR4302532.2771975/1‑94 (MQ=60)
                                                                                           ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT   >  SRR4302532.2097671/1‑94 (MQ=60)
                                                                                           ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT   <  SRR4302532.2653072/94‑1 (MQ=60)
                                                                                           ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT   <  SRR4302532.3704686/94‑1 (MQ=60)
                                                                                           ACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCT   <  SRR4302532.4411610/94‑1 (MQ=60)
                                                                                            TCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTA  >  SRR4302532.1126231/1‑94 (MQ=60)
                                                                                            |                                                                                             
GCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTA  >  NC_000913/1949270‑1949455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: