Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,319,081 |
G→A |
R340H (CGT→CAT) |
atoS → |
AtoS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,319,081 | 0 | G | A | 96.7%
| 871.8
/ 8.7
| 240 | R340H (CGT→CAT) | atoS | AtoS |
| Reads supporting (aligned to +/- strand): ref base G (3/5); new base A (118/114); total (121/119) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 |
Only 100 of 246 total aligned reads displayed.
TTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCGTGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATT > NC_000913/2318990‑2319170
|
tgttCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATg > 1:1887794/1‑93 (MQ=255)
gttCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGa < 2:4949238/93‑1 (MQ=255)
gttCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACAGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGa > 1:1041400/1‑93 (MQ=255)
tCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGAcc < 2:3615962/93‑1 (MQ=255)
cGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCg > 1:1452173/1‑93 (MQ=255)
aCAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCa > 2:157945/1‑93 (MQ=255)
aCAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCa > 2:570057/1‑93 (MQ=255)
cAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCAc > 1:4202225/1‑93 (MQ=255)
cAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCAc > 1:3742535/1‑93 (MQ=255)
cAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCAc > 2:279110/1‑93 (MQ=255)
cAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCAc > 2:3633336/1‑93 (MQ=255)
aTACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCa > 2:1271047/1‑93 (MQ=255)
aTACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCa > 1:1716130/1‑93 (MQ=255)
tACTCAGGTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCAt < 2:2100206/93‑1 (MQ=255)
aCTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCAtt < 1:4443702/93‑1 (MQ=255)
cTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTg < 2:5255045/93‑1 (MQ=255)
gTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACt > 2:1791268/1‑93 (MQ=255)
gTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACt < 2:201862/93‑1 (MQ=255)
gTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACt > 2:3548726/1‑93 (MQ=255)
ttCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTc < 1:5565774/93‑1 (MQ=255)
ttCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTc > 1:5145739/1‑93 (MQ=255)
tCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCa < 2:3425064/93‑1 (MQ=255)
cTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAg < 2:5306764/93‑1 (MQ=255)
cTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAg < 2:1033026/93‑1 (MQ=255)
tACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAgt < 1:3018566/93‑1 (MQ=255)
cAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAgtgt < 2:4712740/93‑1 (MQ=255)
aGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTc > 1:3352612/1‑93 (MQ=255)
gTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCa < 2:1802459/93‑1 (MQ=255)
ccAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACt > 2:5570478/1‑93 (MQ=255)
cAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTa < 1:4147178/93‑1 (MQ=255)
cAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTa < 2:4409494/93‑1 (MQ=255)
cAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTa > 2:1709570/1‑93 (MQ=255)
cAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTa < 1:1138280/93‑1 (MQ=255)
aGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTAc < 2:2371981/93‑1 (MQ=255)
gTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCCCTAcc > 2:2821444/1‑93 (MQ=255)
gTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTAcc > 2:991619/1‑93 (MQ=255)
tACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCa > 2:5778534/1‑93 (MQ=255)
tACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCa > 2:5364791/1‑93 (MQ=255)
tACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCa < 2:5677035/93‑1 (MQ=255)
aCTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAg < 1:4321247/93‑1 (MQ=255)
aCTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAg > 1:4690554/1‑93 (MQ=255)
cTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGt > 1:1498610/1‑93 (MQ=255)
cTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGt > 2:3149931/1‑93 (MQ=255)
tGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTc > 1:5437661/1‑93 (MQ=255)
gggATACGCTGGAACAGGGCACCGAACATGTGGCGCTGGAGATCAGTTTGCCAGGTCATGACCGCACCATTGAACCCAGTGTCACTACCAGTc > 1:5492564/2‑93 (MQ=255)
ggATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCg > 2:3892932/1‑93 (MQ=255)
ggATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCg < 2:5165768/93‑1 (MQ=255)
ggATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCg > 2:3333848/1‑93 (MQ=255)
gATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGt > 2:4371535/1‑93 (MQ=255)
aTACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTa < 2:4009575/93‑1 (MQ=255)
aTACGCTCGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTa < 2:5514226/93‑1 (MQ=255)
tACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTAt < 1:1245494/93‑1 (MQ=255)
cTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCAt > 1:4860260/1‑93 (MQ=255)
tGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATa < 1:96385/93‑1 (MQ=255)
tGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATa < 2:894294/93‑1 (MQ=255)
tGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATa > 1:597399/1‑93 (MQ=255)
ggAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATaa < 1:228075/93‑1 (MQ=255)
aaCATTGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAaca < 2:1895368/93‑1 (MQ=255)
aaCATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAaca < 1:2419822/93‑1 (MQ=255)
aaCATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAaca < 2:3669458/93‑1 (MQ=255)
aaCATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAaca > 1:222773/1‑93 (MQ=255)
aaCATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAaca < 1:2931327/93‑1 (MQ=255)
aCATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAacac > 2:6077318/1‑93 (MQ=255)
aTGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAAcacgc < 1:616223/93‑1 (MQ=255)
gCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAAcacgcacg < 1:5363628/93‑1 (MQ=255)
gCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAAcacgcacg < 1:4262188/93‑1 (MQ=255)
aCCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGt < 2:3679143/93‑1 (MQ=255)
cGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGa < 1:3643065/93‑1 (MQ=255)
cGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGa > 2:3141418/1‑93 (MQ=255)
aaCATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGaaa < 2:3196979/93‑1 (MQ=255)
aaCATGGGGCGCTGGAGATCAGGTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGaaa > 1:3440261/1‑93 (MQ=255)
cATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAacac > 2:833146/1‑80 (MQ=255)
cATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAacac < 1:833146/80‑1 (MQ=255)
aTGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGa > 1:2688118/1‑93 (MQ=255)
tgtgGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCTTAACACGCACGGTGAAATGAt < 1:6055458/93‑1 (MQ=255)
tgtgGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGAt > 2:3492920/1‑93 (MQ=255)
gtgGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATa < 2:6005945/93‑1 (MQ=255)
tgGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAg < 1:2346522/93‑1 (MQ=255)
tgGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAg < 1:3931691/93‑1 (MQ=255)
tgcgcTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAgg < 2:5175901/92‑1 (MQ=255)
ggCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAgg < 2:4519572/93‑1 (MQ=255)
gcTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGc > 2:2318501/1‑93 (MQ=255)
cTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCt < 2:11879/93‑1 (MQ=255)
tGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCtt > 1:253631/1‑93 (MQ=255)
tGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCtt > 2:4160112/1‑93 (MQ=255)
ggAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCttt < 1:775587/93‑1 (MQ=255)
gagaTCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTg > 2:5846761/1‑93 (MQ=255)
agaTCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTgg > 1:1013374/1‑93 (MQ=255)
gaTCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGt > 2:3870515/1‑93 (MQ=255)
tCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGa < 2:4035503/93‑1 (MQ=255)
tCAATTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGa < 2:653264/93‑1 (MQ=255)
cAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGAt < 2:4336166/93‑1 (MQ=255)
cAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGAt < 2:3117272/93‑1 (MQ=255)
aGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGAtt < 1:5625919/93‑1 (MQ=255)
gTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGAttt > 2:412696/1‑93 (MQ=255)
tCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTtctc > 1:5287496/1‑93 (MQ=255)
tCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTtctc < 1:5034458/93‑1 (MQ=255)
cAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTg > 1:4282919/1‑93 (MQ=255)
aGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGa > 2:2960864/1‑93 (MQ=255)
ggTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGAt > 2:5003781/1‑93 (MQ=255)
|
TTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCGTGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATT > NC_000913/2318990‑2319170
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCGTGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATTTAAC > NC_000913/2318988‑2319174
|
TGTTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCA < SRR4302532.764361/94‑1 (MQ=60)
TGTTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCA > SRR4302532.3999650/1‑94 (MQ=60)
TGTTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCA < SRR4302532.1925051/94‑1 (MQ=60)
TTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATG > SRR4302532.1950385/1‑94 (MQ=60)
TGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACAGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGA > SRR4302532.1076518/1‑94 (MQ=60)
GTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCTCTGGAGATCAGTTTTCCAGGTCATGAC < SRR4302532.5316063/94‑1 (MQ=60)
TTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACC < SRR4302532.3426903/94‑1 (MQ=60)
TTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACC < SRR4302532.2412781/94‑1 (MQ=60)
TCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCG > SRR4302532.1501128/1‑94 (MQ=60)
ACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCAC > SRR4302532.3868314/1‑94 (MQ=60)
ACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCAC > SRR4302532.4343299/1‑94 (MQ=60)
ACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCAC > SRR4302532.3652549/1‑94 (MQ=60)
AATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCA > SRR4302532.1801262/1‑94 (MQ=60)
AATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCA > SRR4302532.1773978/1‑94 (MQ=60)
TACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATT < SRR4302532.994296/94‑1 (MQ=60)
ACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTG < SRR4302532.4595139/94‑1 (MQ=60)
CTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGA < SRR4302532.4900450/94‑1 (MQ=60)
CAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAAC > SRR4302532.75943/1‑94 (MQ=60)
GTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCGAGGTCATGACCGCACAATTGAACTC > SRR4302532.431322/1‑94 (MQ=60)
GTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTC > SRR4302532.555237/1‑94 (MQ=60)
GTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTC > SRR4302532.5322756/1‑94 (MQ=60)
TTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCA < SRR4302532.5759041/94‑1 (MQ=60)
TCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAG < SRR4302532.5435239/94‑1 (MQ=60)
TACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTG < SRR4302532.3118154/94‑1 (MQ=60)
TACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTG > SRR4302532.4583457/1‑94 (MQ=60)
CAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTC > SRR4302532.3464538/1‑94 (MQ=60)
CAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTC > SRR4302532.3084112/1‑94 (MQ=60)
AGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCA < SRR4302532.4434664/94‑1 (MQ=60)
GCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACT < SRR4302532.3629173/94‑1 (MQ=60)
CAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTAC < SRR4302532.4286318/94‑1 (MQ=60)
CAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTAC < SRR4302532.1176234/94‑1 (MQ=60)
CAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTAC < SRR4302532.3383924/94‑1 (MQ=60)
CAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTAC < SRR4302532.1431821/94‑1 (MQ=60)
AGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACC > SRR4302532.2471558/1‑94 (MQ=60)
AGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACC < SRR4302532.2893564/94‑1 (MQ=60)
TACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAG > SRR4302532.4850526/1‑94 (MQ=60)
ACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGT < SRR4302532.4467287/94‑1 (MQ=60)
ACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGT > SRR4302532.1549159/1‑94 (MQ=60)
ACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGT > SRR4302532.1549160/1‑94 (MQ=60)
ACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGT > SRR4302532.1549161/1‑94 (MQ=60)
CTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTC > SRR4302532.5626106/1‑94 (MQ=60)
CTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGGCATGACCGCACCATTTAACTCAGTGTCACTACCAGTC > SRR4302532.371708/1‑94 (MQ=60)
CTGGATACGCTGGAACATGGCACCGAACATATGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTC > SRR4302532.5028094/1‑94 (MQ=60)
CGGGATACGCTGGAACAGGGCACCGAACATGTGGCGCTGGAGATCAGTTTGCCAGGTCATGACCGCACCATTGAACCCAGTGTCACTACCAGTC > SRR4302532.5683033/1‑94 (MQ=60)
TGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCGTGACCGCACCATTGAACTCAGTGTCACTACCAGTCG < SRR4302532.421076/94‑1 (MQ=60)
TGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCG < SRR4302532.2461509/94‑1 (MQ=60)
ATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTAT > SRR4302532.3796033/1‑94 (MQ=60)
TACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATT < SRR4302532.1287161/94‑1 (MQ=60)
GCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCAT > SRR4302532.6280712/1‑94 (MQ=60)
GCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCAT < SRR4302532.1206834/94‑1 (MQ=60)
GCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCAT > SRR4302532.5027461/1‑94 (MQ=60)
CTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATA > SRR4302532.618250/1‑94 (MQ=60)
CTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATA > SRR4302532.4009559/1‑94 (MQ=60)
TGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAA < SRR4302532.99742/94‑1 (MQ=60)
GGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAAC > SRR4302532.2351806/1‑94 (MQ=60)
GGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAAC < SRR4302532.235868/94‑1 (MQ=60)
GAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACA < SRR4302532.818518/94‑1 (MQ=60)
GAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACA > SRR4302532.230380/1‑94 (MQ=60)
AACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACAC < SRR4302532.2500267/94‑1 (MQ=60)
AACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACAC < SRR4302532.3028788/94‑1 (MQ=60)
gatcttcgggatACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACG < SRR4302532.861706/82‑1 (MQ=60)
ACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGAACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACG > SRR4302532.6186867/1‑94 (MQ=60)
ATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCA < SRR4302532.637703/94‑1 (MQ=60)
GGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACG < SRR4302532.1248615/94‑1 (MQ=60)
GCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGG < SRR4302532.4405601/94‑1 (MQ=60)
GCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGG < SRR4302532.5549558/94‑1 (MQ=60)
ACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTG < SRR4302532.604296/94‑1 (MQ=60)
ACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGCAGTCATAACACGCACGGTG > SRR4302532.5687547/1‑94 (MQ=60)
CGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAA < SRR4302532.3765302/94‑1 (MQ=60)
GAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAA > SRR4302532.3514853/1‑94 (MQ=60)
GAACATGGGGCGCTGGAGATCAGGTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAA > SRR4302532.3555531/1‑94 (MQ=60)
AACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAAT > SRR4302532.2318764/1‑94 (MQ=60)
AACATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAAT > SRR4302532.5573658/1‑94 (MQ=60)
CATGTGGCGCTGGAGATCAGTTTTCCAGGTCGTGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGA < SRR4302532.1082942/94‑1 (MQ=60)
CATGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGA > SRR4302532.2778407/1‑94 (MQ=60)
TGTGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCTTAACACGCACGGTGAAATGATA < SRR4302532.6264555/94‑1 (MQ=60)
TGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGG < SRR4302532.2424776/94‑1 (MQ=60)
TGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGG < SRR4302532.5467288/94‑1 (MQ=60)
TGGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGG < SRR4302532.4064181/94‑1 (MQ=60)
GGCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGT < SRR4302532.1767673/94‑1 (MQ=60)
GCGCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTG < SRR4302532.2985433/94‑1 (MQ=60)
GCTGGATATCTGTTTTCCATGTCATCACCGCACCATTGAACTCAGTGTCACTTCCAGTCGTATTCATAACACGCACGGTGAAATTATTGGTGCT < SRR4302532.500935/94‑1 (MQ=60)
GCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCT < SRR4302532.4424115/94‑1 (MQ=60)
GCTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCT < SRR4302532.4424114/94‑1 (MQ=60)
CTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTT > SRR4302532.262448/1‑94 (MQ=60)
CTGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTT > SRR4302532.262447/1‑94 (MQ=60)
TGGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTT < SRR4302532.2768028/94‑1 (MQ=60)
TGGAGATCAGTTTTCCAGGTCAGGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTT < SRR4302532.4647125/94‑1 (MQ=60)
GGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCGCTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTG < SRR4302532.3892604/94‑1 (MQ=60)
GGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTG < SRR4302532.802297/94‑1 (MQ=60)
GGAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTG > SRR4302532.791528/1‑94 (MQ=60)
GAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGG > SRR4302532.1047794/1‑94 (MQ=60)
GAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGG < SRR4302532.4392991/94‑1 (MQ=60)
GAGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGG < SRR4302532.2224905/94‑1 (MQ=60)
AGATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGT < SRR4302532.3283013/94‑1 (MQ=60)
GATCAGTTCTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTG > SRR4302532.5097666/1‑94 (MQ=60)
ATCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGA > SRR4302532.581834/1‑94 (MQ=60)
TCAGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGAT > SRR4302532.1842147/1‑94 (MQ=60)
TCAGTTTTCCAGGTCATGACCGCACAATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAAAAATAGGTGCTTTGGagct < SRR4302532.5663259/94‑5 (MQ=60)
AGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTT > SRR4302532.5948441/1‑94 (MQ=60)
AGTTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTT < SRR4302532.5821153/94‑1 (MQ=60)
TTTTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTC < SRR4302532.4336212/94‑1 (MQ=60)
TTCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTC > SRR4302532.5469895/1‑94 (MQ=60)
TCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCT < SRR4302532.5207135/94‑1 (MQ=60)
TCCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCT > SRR4302532.977231/1‑94 (MQ=60)
CCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTG > SRR4302532.4427255/1‑94 (MQ=60)
CCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTG > SRR4302532.570695/1‑94 (MQ=60)
CCAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTG > SRR4302532.1057758/1‑94 (MQ=60)
CAGGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGT > SRR4302532.5546010/1‑94 (MQ=60)
GGTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATT > SRR4302532.4801096/1‑94 (MQ=60)
GTCATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATTT > SRR4302532.4418658/1‑94 (MQ=60)
ATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATTTAAC > SRR4302532.4812362/1‑94 (MQ=60)
ATGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATTTAAC > SRR4302532.4680267/1‑94 (MQ=60)
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TGTTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCGTGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATTTAAC > NC_000913/2318988‑2319174
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
