Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,563,580 |
T→C |
D442G (GAC→GGC) |
b2451 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,563,580 | 0 | T | C | 92.6%
| 512.8
/ 24.2
| 176 | D442G (GAC→GGC) | b2451 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (7/6); new base C (88/75); total (95/81) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.69e-01 |
Only 100 of 192 total aligned reads displayed.
GAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑T‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAG > NC_000913/2563490‑2563669
|
gAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑c‑cc > 2:1698558/1‑93 (MQ=255)
aaTACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑c‑ccc > 2:2557067/1‑93 (MQ=255)
aTACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑c‑ccgc > 2:264577/1‑91 (MQ=255)
aTACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑cccc > 1:5765460/1‑93 (MQ=255)
aTACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑cccc > 1:3765657/1‑93 (MQ=255)
aTACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑cccc > 1:2791711/1‑93 (MQ=255)
tACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑c‑ccccc > 2:764064/1‑93 (MQ=255)
tACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑c‑ccccc > 2:52208/1‑93 (MQ=255)
tACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGAAATAG‑c‑ccccc > 2:1630172/1‑93 (MQ=255)
ccGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCcgc > 1:2470063/1‑93 (MQ=255)
cGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCcgcg > 1:4902208/1‑93 (MQ=255)
cATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCcgcgcg > 1:5360204/1‑93 (MQ=255)
cATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCcgcgcg > 1:4796599/1‑93 (MQ=255)
ttCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGa > 2:1400727/1‑93 (MQ=255)
ttCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGa > 2:1853851/1‑93 (MQ=255)
tCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGAc > 1:6053224/1‑93 (MQ=255)
cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACa > 1:4210406/1‑93 (MQ=255)
aggaaggaAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACaa > 1:5106291/1‑93 (MQ=255)
ggaaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAAt > 2:4775264/1‑93 (MQ=255)
aaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCa > 1:4948040/1‑93 (MQ=255)
ggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACt > 1:2001895/1‑93 (MQ=255)
gaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACtt > 2:2343482/1‑93 (MQ=255)
gaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACtt < 2:3576055/93‑1 (MQ=255)
aaTGCGAGTTATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCg < 2:5132987/93‑1 (MQ=255)
aaTGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCg < 2:5339215/93‑1 (MQ=255)
aaTGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCg < 1:3406968/93‑1 (MQ=255)
aTGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGt > 2:5708325/1‑93 (MQ=255)
aTGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAACAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGt > 1:713796/1‑93 (MQ=255)
tGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTc < 1:5476698/93‑1 (MQ=255)
gCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCa < 1:5616070/93‑1 (MQ=255)
gCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCa < 2:3932874/93‑1 (MQ=255)
gCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCa > 1:3491304/1‑93 (MQ=255)
cGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCaa < 2:5347830/93‑1 (MQ=255)
gAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑TCCCCCCGCGCGGACAATCACTTCGTCaa < 1:2846397/93‑1 (MQ=255)
gAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAAt > 2:1909198/1‑93 (MQ=255)
aTTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTg > 1:4551786/1‑93 (MQ=255)
ttCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGcc < 1:56758/93‑1 (MQ=255)
tcaccgtcaccgGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCa > 2:344328/1‑93 (MQ=255)
accgtcaccgGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑T‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAAc > 2:2194351/1‑93 (MQ=255)
ccgtcaccgGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACg > 2:109975/1‑93 (MQ=255)
gtcaccgGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACggg < 2:2660731/93‑1 (MQ=255)
ctccccgGCAACACCAGTCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCCCGTACAATCACTTCGTCAATGACTGCCAACggg < 1:1466391/89‑1 (MQ=255)
caccgGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAg > 2:5951552/1‑93 (MQ=255)
cccgGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAgt < 2:3849983/92‑1 (MQ=255)
ccgGAACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCGCTTCGTCAATGACTGCCAACGGGAgtt < 2:1413403/93‑1 (MQ=255)
ggCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAgttgt < 2:4103841/93‑1 (MQ=255)
gCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAgttgtt < 1:4308537/93‑1 (MQ=255)
cacaACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGttgttg < 1:38256/93‑1 (MQ=255)
acaACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTtgttgt < 2:4250798/93‑1 (MQ=255)
acaACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTtgttgt > 2:5748131/1‑93 (MQ=255)
acaACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTtgttgt > 1:4785770/1‑93 (MQ=255)
caACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTa > 2:5845510/1‑93 (MQ=255)
caACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTa < 1:1055657/93‑1 (MQ=255)
aaCCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAg > 2:828112/1‑93 (MQ=255)
aaCCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAg > 1:457342/1‑93 (MQ=255)
aCCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGc < 2:4763081/93‑1 (MQ=255)
aCCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGc < 1:129661/93‑1 (MQ=255)
ccGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCt < 1:4734598/93‑1 (MQ=255)
cGATCCGCCAAAAGGGGGCGTACCGATGTCGATCTAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCtg < 2:5485157/93‑1 (MQ=255)
cGATCCGCCAAAAAGAGGCGTACGAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCtg < 1:3509136/93‑1 (MQ=255)
gATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCtgt < 2:3243144/93‑1 (MQ=255)
aTCCACCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCtgtg < 1:4953651/93‑1 (MQ=255)
tCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTgg > 1:4607891/1‑93 (MQ=255)
tCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTgg < 1:5406372/93‑1 (MQ=255)
tCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTgg > 1:5064782/1‑93 (MQ=255)
ccGCCAAAAAGAGGCGTCCCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCCCTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTggg < 2:4925980/93‑1 (MQ=255)
ccGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTggg < 2:278775/93‑1 (MQ=255)
ccGCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTggg < 1:1747704/93‑1 (MQ=255)
gCCAAAAAGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGgcg > 2:4653129/1‑93 (MQ=255)
aaaaaGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGGGGACAATCACTTCGTCAATGACTGCCAACGGGCGTTGTTGTAGCTGTGGgcgcca > 1:3255589/1‑91 (MQ=255)
aaaaaGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGcaa > 2:1081044/1‑93 (MQ=255)
aaaaGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGcaac > 2:2630211/1‑93 (MQ=255)
aaaaGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGcaac > 2:5923925/1‑93 (MQ=255)
aaaaGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGcaac > 1:1290580/1‑93 (MQ=255)
aaaaGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGcaac < 1:4156790/93‑1 (MQ=255)
aaaaGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGcaac < 1:145008/93‑1 (MQ=255)
aaaGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGcaaca > 2:1763911/1‑93 (MQ=255)
aaGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGcaacga > 2:4563168/1‑91 (MQ=255)
aaGAGGCGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGcaacaa < 2:3710960/93‑1 (MQ=255)
cGTACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGcc < 2:2742735/93‑1 (MQ=255)
tACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCa < 2:1972830/93‑1 (MQ=255)
tACCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCa < 2:4818824/93‑1 (MQ=255)
aCCAATGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCag < 2:894500/93‑1 (MQ=255)
aaTGTCGATATAGCC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCagag < 2:5189169/93‑1 (MQ=255)
aaTGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCACCAACATGCCCAGAGc > 2:1301626/1‑93 (MQ=255)
aaTGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGc > 2:454045/1‑93 (MQ=255)
tGTCGATATAG‑T‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCtt > 1:787204/1‑93 (MQ=255)
tGTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCtt > 1:1960814/1‑93 (MQ=255)
gTCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCttt > 1:1041218/1‑93 (MQ=255)
tCGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTa < 2:671566/93‑1 (MQ=255)
cGATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTAc > 2:5684670/1‑93 (MQ=255)
gATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTAcc < 1:2792178/93‑1 (MQ=255)
gATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTAcc > 1:1791637/1‑93 (MQ=255)
gATATAG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTAcc < 1:3727323/93‑1 (MQ=255)
ataG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCaaa < 1:2037604/93‑1 (MQ=255)
ataG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCaaa < 2:3030979/93‑1 (MQ=255)
taG‑T‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAg > 2:426849/1‑93 (MQ=255)
taG‑T‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAg < 1:5590466/93‑1 (MQ=255)
taG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACTAAAg > 2:1527599/1‑93 (MQ=255)
taG‑C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAg < 1:5313600/93‑1 (MQ=255)
|
GAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAG‑T‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAG > NC_000913/2563490‑2563669
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGT‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCT > NC_000913/2563488‑2563673
|
GCGAATACCGCATTCAGGAAGGAGATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑C < SRR4302532.4517571/94‑1 (MQ=60)
GCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑C < SRR4302532.4893048/94‑1 (MQ=60)
GCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑C < SRR4302532.4893047/94‑1 (MQ=60)
CGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CC < SRR4302532.4723258/94‑1 (MQ=60)
GAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCC > SRR4302532.351772/1‑94 (MQ=60)
GAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCC > SRR4302532.5899403/1‑94 (MQ=60)
AATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCC > SRR4302532.5966087/1‑94 (MQ=60)
AATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCC > SRR4302532.3892373/1‑94 (MQ=60)
AATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCC < SRR4302532.3218610/94‑1 (MQ=60)
AATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCC > SRR4302532.2885309/1‑94 (MQ=60)
ATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCC < SRR4302532.4374409/94‑1 (MQ=60)
TACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCG > SRR4302532.1840871/1‑94 (MQ=60)
ACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGC < SRR4302532.5116569/94‑1 (MQ=60)
ACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGC > SRR4302532.2552302/1‑94 (MQ=60)
CCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCG > SRR4302532.5070670/1‑94 (MQ=60)
CCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCG > SRR4302532.5662247/1‑94 (MQ=60)
CCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCG > SRR4302532.2059684/1‑94 (MQ=60)
CGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGC < SRR4302532.4348052/94‑1 (MQ=60)
GCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCG > SRR4302532.4961790/1‑94 (MQ=60)
GCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCG > SRR4302532.5546043/1‑94 (MQ=60)
CATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCCGCGCG < SRR4302532.1019284/94‑1 (MQ=60)
ATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGA > SRR4302532.1414849/1‑94 (MQ=60)
ATTCAGGAAGGAAATGCGAGTGATTTCACCATCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGC > SRR4302532.5247401/1‑94 (MQ=60)
TTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGAC > SRR4302532.6262257/1‑94 (MQ=60)
TCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACA > SRR4302532.4351745/1‑94 (MQ=60)
CAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAA > SRR4302532.5281839/1‑94 (MQ=60)
GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATC < SRR4302532.2006505/94‑1 (MQ=60)
GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATC > SRR4302532.4909436/1‑94 (MQ=60)
GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATC > SRR4302532.1153716/1‑94 (MQ=60)
GAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCA > SRR4302532.2081612/1‑94 (MQ=60)
GAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCA > SRR4302532.5117853/1‑94 (MQ=60)
AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACT > SRR4302532.2068623/1‑94 (MQ=60)
GAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTC > SRR4302532.5121204/1‑94 (MQ=60)
GAAAGCCGAGTGATTTCACCGTCACCGGCACAACCGATACGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTC < SRR4302532.5451011/94‑1 (MQ=60)
AATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGT < SRR4302532.3521050/94‑1 (MQ=60)
AATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAACAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGT > SRR4302532.738182/1‑94 (MQ=60)
TGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCA > SRR4302532.3608287/1‑94 (MQ=60)
TGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCA < SRR4302532.5666591/94‑1 (MQ=60)
GCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGCTATAGC‑CCCCCCCGCGGACACTCACTTCGcgct > SRR4302532.3880827/1‑90 (MQ=60)
GCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAA < SRR4302532.5810941/94‑1 (MQ=60)
GAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCCGCGCGGACAATCACTTCGTCAAT < SRR4302532.2941534/94‑1 (MQ=60)
AGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGA < SRR4302532.4773474/94‑1 (MQ=60)
AGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGA < SRR4302532.3601441/94‑1 (MQ=60)
GATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTG > SRR4302532.4707111/1‑94 (MQ=60)
TTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCA < SRR4302532.58809/94‑1 (MQ=60)
CACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAAC > SRR4302532.3615732/1‑94 (MQ=60)
CGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGG > SRR4302532.5824752/1‑94 (MQ=60)
ctccccggccaAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGA < SRR4302532.1515792/83‑1 (MQ=60)
ctccccggcaacaccagTCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCCCGTACAATCACTTCGTCAATGACTGCCAACGGGA < SRR4302532.1515793/77‑1 (MQ=60)
GTCACCGGCACACCCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGG < SRR4302532.5533942/94‑1 (MQ=60)
CCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGT‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTG > SRR4302532.1803102/1‑94 (MQ=60)
GCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGT‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTG > SRR4302532.3913449/1‑94 (MQ=60)
GCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTG < SRR4302532.6291543/94‑1 (MQ=60)
GCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTG < SRR4302532.4454208/94‑1 (MQ=60)
GCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTG < SRR4302532.5760172/94‑1 (MQ=60)
CACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGT < SRR4302532.39645/94‑1 (MQ=60)
CACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGT > SRR4302532.4950565/1‑94 (MQ=60)
CACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGT > SRR4302532.5151181/1‑94 (MQ=60)
ACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTA < SRR4302532.5442026/94‑1 (MQ=60)
ACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTA < SRR4302532.1333839/94‑1 (MQ=60)
CAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAG > SRR4302532.473256/1‑94 (MQ=60)
CAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAG > SRR4302532.473255/1‑94 (MQ=60)
CAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAG < SRR4302532.1091234/94‑1 (MQ=60)
ACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGCCAATCACTTCGTCAATGACTGCCAACGGGAGggggtgtaggt > SRR4302532.2705450/1‑83 (MQ=60)
ACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCT < SRR4302532.134048/94‑1 (MQ=60)
CCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCT < SRR4302532.4262425/94‑1 (MQ=60)
CCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTG < SRR4302532.4896221/94‑1 (MQ=60)
CGATCCGCCAAAAAGAGGCGTACGAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGT < SRR4302532.3626660/94‑1 (MQ=60)
CGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGT < SRR4302532.4958056/94‑1 (MQ=60)
ATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGG > SRR4302532.4765006/1‑94 (MQ=60)
ATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGG > SRR4302532.5238726/1‑94 (MQ=60)
ATCCACCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGG < SRR4302532.5123603/94‑1 (MQ=60)
TCCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGG < SRR4302532.5593673/94‑1 (MQ=60)
CCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGC < SRR4302532.6216019/94‑1 (MQ=60)
CCGCCAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGC < SRR4302532.1806463/94‑1 (MQ=60)
CAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGGGGACAATCACTTCGTCAATGACTGCCAACGGGCGTTGTTGTAGCTGTGGGCGCCA > SRR4302532.3363738/1‑94 (MQ=60)
CAAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAA > SRR4302532.2371091/1‑94 (MQ=60)
AAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAAC > SRR4302532.1333758/1‑94 (MQ=60)
AAAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAAC > SRR4302532.3729444/1‑94 (MQ=60)
AAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACA < SRR4302532.4296225/94‑1 (MQ=60)
AAAAGAGGCGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACA < SRR4302532.149880/94‑1 (MQ=60)
AGAGGCGTACCAATGTCGATATAGT‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACA < SRR4302532.2781817/94‑1 (MQ=60)
CGTACCAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCC > SRR4302532.4678992/1‑94 (MQ=60)
TACCAATGTCGATATAGT‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAG < SRR4302532.2922588/94‑1 (MQ=60)
CAATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGC > SRR4302532.5029711/1‑94 (MQ=60)
ATGTCGATATAGT‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTT > SRR4302532.814212/1‑94 (MQ=60)
ATGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTT > SRR4302532.2025943/1‑94 (MQ=60)
TGTCGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTT > SRR4302532.1076329/1‑94 (MQ=60)
CGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACC < SRR4302532.1028961/94‑1 (MQ=60)
CGATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACC > SRR4302532.1851495/1‑94 (MQ=60)
GATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCA < SRR4302532.2885787/94‑1 (MQ=60)
GATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCA < SRR4302532.3852528/94‑1 (MQ=60)
GATATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCA > SRR4302532.5806607/1‑94 (MQ=60)
ATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAG < SRR4302532.2105476/94‑1 (MQ=60)
ATAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAG < SRR4302532.740552/94‑1 (MQ=60)
TAGT‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGT < SRR4302532.5784528/94‑1 (MQ=60)
TAGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGT < SRR4302532.5497386/94‑1 (MQ=60)
AGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTC < SRR4302532.4112324/94‑1 (MQ=60)
AGC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTC > SRR4302532.567983/1‑94 (MQ=60)
GC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCC > SRR4302532.5639177/1‑94 (MQ=60)
GC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCC < SRR4302532.5034483/94‑1 (MQ=60)
GC‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTAGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCC < SRR4302532.2108971/94‑1 (MQ=60)
C‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCT < SRR4302532.276827/94‑1 (MQ=60)
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GCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGT‑CCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCT > NC_000913/2563488‑2563673
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
