Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,594,929 |
T→C |
D237G (GAC→GGC) |
purC ← |
phosphoribosylaminoimidazole‑succinocarboxamide synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,594,929 | 0 | T | C | 95.7%
| 614.7
/ 10.0
| 188 | D237G (GAC→GGC) | purC | phosphoribosylaminoimidazole‑succinocarboxamide synthetase |
| Reads supporting (aligned to +/- strand): ref base T (5/3); new base C (90/90); total (95/93) |
| Fisher's exact test for biased strand distribution p-value = 7.21e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.79e-01 |
Only 100 of 196 total aligned reads displayed.
TGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTC > NC_000913/2594838‑2595018
|
ggCGGAGGAATGAGCGTTCAATGCATATATTCCGATAGCGGTTGTCTTGCCGTGCCAGCGGCACGGCAAGATGATGAACAGAAAAATCAGTcc < 1:5576686/93‑1 (MQ=255)
ggCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGccc < 2:316353/93‑1 (MQ=255)
ggCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGccc < 2:3530676/93‑1 (MQ=255)
gCGGAGTAACGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCa < 2:1402166/93‑1 (MQ=255)
gCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCa < 1:753298/93‑1 (MQ=255)
ggaggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGc < 1:5922607/93‑1 (MQ=255)
gaggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCt > 2:2798385/1‑93 (MQ=255)
gaggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCt > 2:726818/1‑93 (MQ=255)
ggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGGACAGAAAAAACAACCCAGCCGt > 1:2565040/1‑93 (MQ=255)
gaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTa > 1:265336/1‑93 (MQ=255)
aaTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTac < 1:2863325/93‑1 (MQ=255)
aTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTaca > 2:5668577/1‑93 (MQ=255)
tGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTagac < 2:2664991/93‑1 (MQ=255)
gAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACAcc > 2:791913/1‑93 (MQ=255)
gAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACAcc < 2:1314690/93‑1 (MQ=255)
aGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCCGCTGCACGGCAAGATGATGAACAGGAAAAACAGCCCAGCTGTACAccc > 1:3500589/1‑93 (MQ=255)
aGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACAccc < 1:1111339/93‑1 (MQ=255)
aGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACAccc < 1:4824986/93‑1 (MQ=255)
ttCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAggc < 1:3833032/93‑1 (MQ=255)
aaTGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAggcggc > 2:3045278/1‑93 (MQ=255)
aaTGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAggcggc > 1:4981984/1‑93 (MQ=255)
aTGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAACCCAGCTGTACACCCAGgcggcg > 1:3551389/1‑93 (MQ=255)
tGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGcggcgg > 1:3415586/1‑93 (MQ=255)
gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCggcggg > 1:1188799/1‑93 (MQ=255)
cATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCggcgggg > 2:2809828/1‑92 (MQ=255)
cATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCggcgggg > 1:1680662/1‑92 (MQ=255)
cATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCggcgggc < 2:3912751/93‑1 (MQ=255)
cATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCggcgggc < 1:4037117/93‑1 (MQ=255)
atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGAc < 1:4242827/93‑1 (MQ=255)
atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGAc < 2:4673582/93‑1 (MQ=255)
atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGAc < 2:3173924/93‑1 (MQ=255)
atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGAc < 2:2940977/93‑1 (MQ=255)
tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACg < 2:36342/93‑1 (MQ=255)
atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACgg > 1:3253896/1‑93 (MQ=255)
ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGc > 1:2201919/1‑93 (MQ=255)
ccGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCtt < 2:4170006/93‑1 (MQ=255)
gagaGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCa < 1:520517/93‑1 (MQ=255)
gagaGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCa > 1:3128848/1‑93 (MQ=255)
gagaGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCa < 2:4063943/93‑1 (MQ=255)
agagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCAt > 1:5138381/1‑93 (MQ=255)
gagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATa > 2:1512294/1‑93 (MQ=255)
gagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATa < 2:1851753/93‑1 (MQ=255)
gagCGGTGGTCTGCCTGGGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCCACGGCTTCATa < 1:1379965/93‑1 (MQ=255)
ggTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGGCGGCTTTATAGGCt > 1:4564802/1‑93 (MQ=255)
gTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCtt > 1:1043375/1‑93 (MQ=255)
gTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATAAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCtt < 2:1768926/93‑1 (MQ=255)
gTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAAACAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCtt > 1:4670517/1‑93 (MQ=255)
tCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGAt < 1:3359722/93‑1 (MQ=255)
cTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATc < 1:2346070/93‑1 (MQ=255)
ttGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATcg > 1:2049073/1‑92 (MQ=255)
ttGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCa < 1:2988058/93‑1 (MQ=255)
tcgCCGTCCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCa < 1:1322491/91‑1 (MQ=255)
tGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAg < 2:2326032/93‑1 (MQ=255)
gCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAGTCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAgg > 1:3080555/1‑93 (MQ=255)
gCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAgg > 2:5577422/1‑93 (MQ=255)
ccGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGc < 2:5870038/93‑1 (MQ=255)
ccGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGc > 1:1946351/1‑93 (MQ=255)
ccGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGc < 1:5346821/93‑1 (MQ=255)
cGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGcc < 2:4276376/93‑1 (MQ=255)
gTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCa < 2:303949/93‑1 (MQ=255)
gTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCa > 2:4484339/1‑93 (MQ=255)
gTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGAGACGGCTTCATAGGCTTCGATCAGGCCa > 2:108843/1‑93 (MQ=255)
gCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCAcc < 2:2473001/93‑1 (MQ=255)
gCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCACAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCAcc < 2:26867/93‑1 (MQ=255)
ccAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCg > 1:1899888/1‑93 (MQ=255)
cAGCTGCGCGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGa < 1:5672522/93‑1 (MQ=255)
aGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAg > 2:4943745/1‑93 (MQ=255)
cTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGc < 2:5195044/93‑1 (MQ=255)
gCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGctc > 1:992928/1‑93 (MQ=255)
gCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGctc < 1:1047294/93‑1 (MQ=255)
cACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGctct < 2:5078920/93‑1 (MQ=255)
aCGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATAAGGACACCGAGGCTCTg > 1:2522103/1‑93 (MQ=255)
cGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTgg < 2:5282394/93‑1 (MQ=255)
cGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTgg > 1:5376032/1‑93 (MQ=255)
ggCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGc > 1:5310544/1‑93 (MQ=255)
gatgatGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGaaa > 2:5126129/1‑93 (MQ=255)
gatgatGAAAAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGTaaa < 2:3416856/93‑1 (MQ=255)
atgatgAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAAc > 2:3342014/1‑93 (MQ=255)
atgatgAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAAc < 2:5542217/93‑1 (MQ=255)
atgatgAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCAGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAAc < 1:4612142/93‑1 (MQ=255)
tgatgaACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACg > 2:6142420/1‑93 (MQ=255)
tgatgaACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACg < 2:2151799/93‑1 (MQ=255)
agatgaACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACg < 1:4449705/92‑1 (MQ=255)
agatgaACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACg < 2:2223795/92‑1 (MQ=255)
atgaACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGt < 1:646843/93‑1 (MQ=255)
tgaACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTc > 1:1805830/1‑93 (MQ=255)
tgaACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTc > 2:2729241/1‑93 (MQ=255)
gaACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCt > 2:3250521/1‑93 (MQ=255)
gaACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCt < 2:3523102/93‑1 (MQ=255)
gaACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAAAGGTCt > 2:3015037/1‑93 (MQ=255)
aaaCAGAAAAATGAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGctct < 1:6020912/92‑1 (MQ=255)
aaCAGAAAAATAAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCtt < 1:5180908/93‑1 (MQ=255)
aCAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCttt > 2:3337976/1‑93 (MQ=255)
aCAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCttt > 2:144520/1‑93 (MQ=255)
aCAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAAAGCTCttt > 1:90442/1‑93 (MQ=255)
gAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTc > 2:1793871/1‑93 (MQ=255)
aaaaTCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCa < 1:929268/93‑1 (MQ=255)
aaaTCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCAt < 1:3801344/93‑1 (MQ=255)
aaaTCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGACGGAAACGGTCTTTGTCCAt > 2:3040788/1‑93 (MQ=255)
tCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCAtttt > 2:4623923/1‑93 (MQ=255)
|
TGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTC > NC_000913/2594838‑2595018
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCC > NC_000913/2594838‑2595021
|
TGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCC < SRR4302532.5466228/94‑1 (MQ=60)
GGCGGAGGAATGAGCGTTCAATGCATATATTCCGATAGCGGTTGTCTTGCCGTGCCAGCGGCACGGCAAGATGATGAACAGAAAAATCAGTCCA < SRR4302532.5770312/94‑1 (MQ=60)
GCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAG < SRR4302532.779095/94‑1 (MQ=60)
GCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAG < SRR4302532.3418404/94‑1 (MQ=60)
GGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCT < SRR4302532.6127688/94‑1 (MQ=60)
GGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCT > SRR4302532.4823060/1‑94 (MQ=60)
GAGGAATGAGCGTTCAATGCATATATGCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTG < SRR4302532.550608/94‑1 (MQ=60)
AGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGT < SRR4302532.2629443/94‑1 (MQ=60)
GGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTA < SRR4302532.5577062/94‑1 (MQ=60)
GGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTA > SRR4302532.274526/1‑94 (MQ=60)
AATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACA < SRR4302532.2959080/94‑1 (MQ=60)
GAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCCGCTGCACGGCAAGATGATGAACAGGAAAAACAGCCCAGCTGTACACCC > SRR4302532.3617855/1‑94 (MQ=60)
AGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCA < SRR4302532.1188326/94‑1 (MQ=60)
AGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCA < SRR4302532.4991093/94‑1 (MQ=60)
AGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCA < SRR4302532.1148495/94‑1 (MQ=60)
TTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCCCGGCAAGATGATGAAAAGAAAAAAAAACCCAGCTGTACACCCACGCG > SRR4302532.4601003/1‑94 (MQ=60)
TTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCG < SRR4302532.3962449/94‑1 (MQ=60)
CAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGC > SRR4302532.5152765/1‑94 (MQ=60)
CAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGC > SRR4302532.2563341/1‑94 (MQ=60)
AATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCG > SRR4302532.483653/1‑94 (MQ=60)
AATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAACCCAGCTGTACACCCAGGCGGCG > SRR4302532.3670198/1‑94 (MQ=60)
ATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGG > SRR4302532.3529984/1‑94 (MQ=60)
TGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGG > SRR4302532.1228546/1‑94 (MQ=60)
GCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGG > SRR4302532.1737470/1‑94 (MQ=60)
CATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCG < SRR4302532.4173105/94‑1 (MQ=60)
ATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACG < SRR4302532.4353294/94‑1 (MQ=60)
ATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACG < SRR4302532.4385373/94‑1 (MQ=60)
TATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGG > SRR4302532.3361984/1‑94 (MQ=60)
TATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGG > SRR4302532.720301/1‑94 (MQ=60)
ATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGC > SRR4302532.2275183/1‑94 (MQ=60)
TTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCT < SRR4302532.3852466/94‑1 (MQ=60)
TCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTT > SRR4302532.5337900/1‑94 (MQ=60)
CCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAAAAAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTC > SRR4302532.2571975/1‑94 (MQ=60)
CGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCA > SRR4302532.3232717/1‑94 (MQ=60)
GAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCAT > SRR4302532.5315153/1‑94 (MQ=60)
GAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCAT < SRR4302532.538700/94‑1 (MQ=60)
gagcggtggtctgcctggGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCCACGGCTTCATAG < SRR4302532.1426205/76‑1 (MQ=60)
AGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGG < SRR4302532.211988/94‑1 (MQ=60)
ggttgttctcgccggcccgccggcagGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCT < SRR4302532.3595180/68‑1 (MQ=60)
CGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGGCGGCTTTATAGGCT > SRR4302532.4720500/1‑94 (MQ=60)
CGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCT > SRR4302532.463950/1‑94 (MQ=60)
GGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTT > SRR4302532.3996571/1‑94 (MQ=60)
GGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTT > SRR4302532.1078554/1‑94 (MQ=60)
GGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAAACAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTT > SRR4302532.4829760/1‑94 (MQ=60)
TTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCG < SRR4302532.1824200/94‑1 (MQ=60)
TGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGA > SRR4302532.5537738/1‑94 (MQ=60)
GTCTTGCCGTGCCAGCTGCACGTCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGAT < SRR4302532.5108934/94‑1 (MQ=60)
GTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGAT > SRR4302532.3145209/1‑94 (MQ=60)
TCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC < SRR4302532.3471962/94‑1 (MQ=60)
CTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCG > SRR4302532.2117302/1‑94 (MQ=60)
CTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCA > SRR4302532.3572263/1‑94 (MQ=60)
CTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCA < SRR4302532.2424305/94‑1 (MQ=60)
CTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCA > SRR4302532.5372368/1‑94 (MQ=60)
TTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAG < SRR4302532.474719/94‑1 (MQ=60)
TTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAG < SRR4302532.3086838/94‑1 (MQ=60)
TCGCCGTCCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAG < SRR4302532.1366682/94‑1 (MQ=60)
TGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAGTCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGG > SRR4302532.3182410/1‑94 (MQ=60)
GCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGC > SRR4302532.2011067/1‑94 (MQ=60)
CCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCC < SRR4302532.5532329/94‑1 (MQ=60)
CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCA > SRR4302532.2312451/1‑94 (MQ=60)
CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCA > SRR4302532.805258/1‑94 (MQ=60)
GTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGACAC > SRR4302532.6196993/1‑94 (MQ=60)
GCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCG > SRR4302532.1962886/1‑94 (MQ=60)
CAGCTGCGCGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAG < SRR4302532.5870417/94‑1 (MQ=60)
CAGCTGCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAG < SRR4302532.167059/94‑1 (MQ=60)
TGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTC > SRR4302532.1026808/1‑94 (MQ=60)
GCACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCT < SRR4302532.1082599/94‑1 (MQ=60)
CACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTG < SRR4302532.3618197/94‑1 (MQ=60)
CACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTG < SRR4302532.3215865/94‑1 (MQ=60)
CACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATAAGGACACCGAGGCTCTG > SRR4302532.2606268/1‑94 (MQ=60)
ACGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGG > SRR4302532.5562270/1‑94 (MQ=60)
CGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGC > SRR4302532.5494186/1‑94 (MQ=60)
CGGCAAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGC < SRR4302532.5928455/94‑1 (MQ=60)
AAGATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAA > SRR4302532.1954551/1‑94 (MQ=60)
ATGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCAGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACG < SRR4302532.4769396/94‑1 (MQ=60)
TGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGG < SRR4302532.1337693/94‑1 (MQ=60)
AGATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGG < SRR4302532.4601357/94‑1 (MQ=60)
ATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTC > SRR4302532.1866107/1‑94 (MQ=60)
ATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTC < SRR4302532.669297/94‑1 (MQ=60)
ATGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGGC > SRR4302532.2797637/1‑94 (MQ=60)
TGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCT < SRR4302532.5152808/94‑1 (MQ=60)
TGAACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCT > SRR4302532.1093254/1‑94 (MQ=60)
AAACAGAAAAATGAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGCTCTT < SRR4302532.6228834/94‑1 (MQ=60)
AACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTT < SRR4302532.2063979/94‑1 (MQ=60)
AACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTT < SRR4302532.4576478/94‑1 (MQ=60)
AACAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAAAGCTCTTT > SRR4302532.93606/1‑94 (MQ=60)
AACAGAAAAATAAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTT < SRR4302532.5359350/94‑1 (MQ=60)
CAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGT < SRR4302532.5439075/94‑1 (MQ=60)
CAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGT < SRR4302532.5835623/94‑1 (MQ=60)
CAGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGT > SRR4302532.2981242/1‑94 (MQ=60)
AGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTTATAGGCTTCGATCAGGCCACCGAGGATCTGGCGGAAAAGGCCTTTATC > SRR4302532.94504/1‑94 (MQ=60)
AGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTC > SRR4302532.2686446/1‑94 (MQ=60)
AGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTC < SRR4302532.2008786/94‑1 (MQ=60)
AGAAAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTC > SRR4302532.94505/1‑94 (MQ=60)
AAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCAT < SRR4302532.961101/94‑1 (MQ=60)
AAAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCAT < SRR4302532.1384674/94‑1 (MQ=60)
AAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATT > SRR4302532.3345505/1‑94 (MQ=60)
AAATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATT < SRR4302532.3929639/94‑1 (MQ=60)
AATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTT < SRR4302532.3511727/94‑1 (MQ=60)
ATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGTCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTT < SRR4302532.1013692/94‑1 (MQ=60)
ATCAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTT < SRR4302532.6320980/94‑1 (MQ=60)
CAGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCT > SRR4302532.2842059/1‑94 (MQ=60)
AGCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTC > SRR4302532.2576416/1‑94 (MQ=60)
GCCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCC < SRR4302532.5506008/94‑1 (MQ=60)
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TGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCC > NC_000913/2594838‑2595021
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
