Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,599,294 |
T→C |
V25A (GTG→GCG) |
b2481 → |
hydrogenase 4 Fe‑S subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,599,294 | 0 | T | C | 96.2%
| 609.9
/ 4.6
| 187 | V25A (GTG→GCG) | b2481 | hydrogenase 4 Fe‑S subunit |
| Reads supporting (aligned to +/- strand): ref base T (4/3); new base C (86/93); total (91/96) |
| Fisher's exact test for biased strand distribution p-value = 7.14e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 198 total aligned reads displayed.
CATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGT > NC_000913/2599203‑2599382
|
aTTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACgcgc > 1:1190992/1‑93 (MQ=255)
aTTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACgcgc > 1:1197800/1‑93 (MQ=255)
ttttCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCa > 1:5179090/1‑93 (MQ=255)
ttttCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCa > 2:1425416/1‑93 (MQ=255)
ttCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATa < 1:3887430/93‑1 (MQ=255)
tCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATaa > 1:3943215/1‑93 (MQ=255)
tCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATaa > 2:4392904/1‑93 (MQ=255)
tCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATaa > 1:3561421/1‑93 (MQ=255)
tCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATaa > 1:1770916/1‑93 (MQ=255)
tCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATaa > 1:1998724/1‑93 (MQ=255)
cAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATaaa < 1:1910773/93‑1 (MQ=255)
cAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATaaa < 1:5589989/93‑1 (MQ=255)
cAAGGAGCAGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATaaa < 2:4540691/93‑1 (MQ=255)
aaGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATaaaa > 2:968687/1‑93 (MQ=255)
aaGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATaaaa < 2:4753839/93‑1 (MQ=255)
aGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAAc > 2:2033223/1‑93 (MQ=255)
aGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAAc < 1:4759191/93‑1 (MQ=255)
aGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAAc < 1:4184928/93‑1 (MQ=255)
ggAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCGGCCTGTTCGGACGCGCATAAAAcc > 1:4877977/1‑92 (MQ=255)
gCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCaa > 1:654861/1‑93 (MQ=255)
gCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCaa > 2:3689255/1‑93 (MQ=255)
gCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCaa > 1:1677869/1‑93 (MQ=255)
gCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCaa < 1:163107/93‑1 (MQ=255)
ccGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAg < 1:652284/93‑1 (MQ=255)
gACATGAACCGCTTTGTGGTGGCTGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGt < 1:3499801/93‑1 (MQ=255)
gACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGt < 2:2548539/93‑1 (MQ=255)
gACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGt > 1:700720/1‑93 (MQ=255)
gACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGt > 2:4321234/1‑93 (MQ=255)
aCATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGtt < 2:662807/93‑1 (MQ=255)
aCATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGtt > 2:4498094/1‑93 (MQ=255)
aCATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGtt < 2:4880582/93‑1 (MQ=255)
cATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGttt > 2:1162587/1‑93 (MQ=255)
cATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGttt > 1:1088516/1‑93 (MQ=255)
cATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGttt < 2:4666858/93‑1 (MQ=255)
tGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTAc > 2:1572704/1‑93 (MQ=255)
tGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTAc < 1:2368038/93‑1 (MQ=255)
gAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACa < 1:5310711/93‑1 (MQ=255)
ccGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCa < 2:3232930/93‑1 (MQ=255)
ccGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCa > 2:4594248/1‑93 (MQ=255)
cGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCaa < 1:3258896/93‑1 (MQ=255)
cGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCaa > 2:4030512/1‑93 (MQ=255)
cGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCaa < 2:4618091/93‑1 (MQ=255)
gCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAac > 2:622699/1‑93 (MQ=255)
cTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAaca < 1:854767/93‑1 (MQ=255)
tttGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAacac < 2:4786249/93‑1 (MQ=255)
tgtgGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACAccc < 1:4142173/93‑1 (MQ=255)
tggtggCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCcgc < 1:5631589/93‑1 (MQ=255)
tggtggCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCcgc < 2:357420/93‑1 (MQ=255)
ggtggCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCcgcg > 1:3195023/1‑93 (MQ=255)
ggCCGAACCACTGTGGTGTACAGGATGTATTACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcct < 2:2962998/93‑1 (MQ=255)
gCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctg > 2:2295672/1‑93 (MQ=255)
gCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctg < 2:1986858/93‑1 (MQ=255)
ccGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctgg < 1:3277033/93‑1 (MQ=255)
cGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggc > 2:3517812/1‑93 (MQ=255)
aaCCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggccc > 1:4540796/1‑93 (MQ=255)
aaCCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggccc > 2:28699/1‑93 (MQ=255)
aCCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggccct < 1:794386/93‑1 (MQ=255)
aCCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggccct < 1:3102157/93‑1 (MQ=255)
ccACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggccctg < 1:2976687/93‑1 (MQ=255)
ccACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggccctg < 1:3401505/93‑1 (MQ=255)
ccACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggccctg < 1:4980615/93‑1 (MQ=255)
ccACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggccctg < 2:5739314/93‑1 (MQ=255)
cACTGTGGTGTACAGGATGTAATTTCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACCCCCGCGcctggccctgg < 2:5254111/93‑1 (MQ=255)
cACTGTGGTGTACAGGATGTAATGCCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggccctgg < 1:3332870/93‑1 (MQ=255)
aCTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggccctggc > 1:2460538/1‑93 (MQ=255)
aCTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGcctggccctggc > 1:4340258/1‑93 (MQ=255)
ggtgTACAGGATTTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGa < 2:3121356/93‑1 (MQ=255)
gtgtACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGAc < 2:674554/93‑1 (MQ=255)
tACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGta > 1:1176053/1‑92 (MQ=255)
cAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTcaa < 2:587284/93‑1 (MQ=255)
cAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTcaa < 1:2089191/93‑1 (MQ=255)
ggATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTcaaca < 1:5080203/93‑1 (MQ=255)
aaTACCTGCCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCACCACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACt < 1:5109514/93‑1 (MQ=255)
cTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGcccc < 2:846444/93‑1 (MQ=255)
tGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCt > 1:2171100/1‑93 (MQ=255)
tctcGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCtat > 2:2830775/1‑91 (MQ=255)
tctcGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGt < 2:5518585/93‑1 (MQ=255)
tcgcGCTGCCTGTTCGGTCGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGt > 1:5483354/4‑93 (MQ=255)
ctcGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTc < 1:3732071/93‑1 (MQ=255)
tcGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCg > 2:1655867/1‑93 (MQ=255)
gCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCgtg < 2:5431556/93‑1 (MQ=255)
cTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCgtgt > 2:3831176/1‑93 (MQ=255)
cTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCgtgt < 2:5060334/93‑1 (MQ=255)
tGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCgtgtg > 1:385849/1‑93 (MQ=255)
tGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCgtgtg < 2:392012/93‑1 (MQ=255)
gCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCgtgtgt > 1:5766164/1‑93 (MQ=255)
ccTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGtc > 1:4089111/1‑93 (MQ=255)
cTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGGCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGtca > 1:5727556/1‑93 (MQ=255)
cTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGtca > 1:3025300/1‑93 (MQ=255)
cTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGtca < 2:4809873/93‑1 (MQ=255)
tGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGtcat > 2:1378328/1‑93 (MQ=255)
tGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGtcat > 2:5008353/1‑93 (MQ=255)
tCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCAc > 1:141408/1‑93 (MQ=255)
tCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCAc < 2:4205462/93‑1 (MQ=255)
cGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACt < 2:3993050/93‑1 (MQ=255)
cGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACt < 1:3343556/93‑1 (MQ=255)
ggACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACtg > 1:6048058/1‑93 (MQ=255)
gACGCGCATAAAACGCAAGGTTTACAGCAACCCCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACtgt < 1:4459400/93‑1 (MQ=255)
gACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACtgt < 1:4518141/93‑1 (MQ=255)
gACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACtgt < 1:3743732/93‑1 (MQ=255)
|
CATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGT > NC_000913/2599203‑2599382
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTGAGGA > NC_000913/2599202‑2599387
|
TCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTG > SRR4302532.5797229/1‑94 (MQ=60)
TCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCG > SRR4302532.4421045/1‑94 (MQ=60)
CATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGC > SRR4302532.1230814/1‑94 (MQ=60)
CATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGC > SRR4302532.1230815/1‑94 (MQ=60)
CATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGC > SRR4302532.1237854/1‑94 (MQ=60)
ATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCA > SRR4302532.5357454/1‑94 (MQ=60)
TTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCAT < SRR4302532.47773/94‑1 (MQ=60)
TTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCAT < SRR4302532.840408/94‑1 (MQ=60)
TTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATAA > SRR4302532.4076087/1‑94 (MQ=60)
TTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAA < SRR4302532.5830397/94‑1 (MQ=60)
TTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAA > SRR4302532.2065322/1‑94 (MQ=60)
TTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAA > SRR4302532.3680588/1‑94 (MQ=60)
TTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAA > SRR4302532.1830252/1‑94 (MQ=60)
TTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAA < SRR4302532.4018600/94‑1 (MQ=60)
CAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAA < SRR4302532.5203734/94‑1 (MQ=60)
CAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAA < SRR4302532.1974237/94‑1 (MQ=60)
CAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAA > SRR4302532.4263835/1‑94 (MQ=60)
CAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAA > SRR4302532.5434634/1‑94 (MQ=60)
CAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAA < SRR4302532.5784033/94‑1 (MQ=60)
AAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAAC > SRR4302532.2241401/1‑94 (MQ=60)
AGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACG < SRR4302532.4922058/94‑1 (MQ=60)
AGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACG < SRR4302532.4325318/94‑1 (MQ=60)
AGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCGGCCTGTTCGGACGCGCATAAAACC > SRR4302532.5045689/1‑94 (MQ=60)
GAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACACA > SRR4302532.4636946/1‑94 (MQ=60)
AGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAA > SRR4302532.677561/1‑94 (MQ=60)
AGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAA < SRR4302532.3675363/94‑1 (MQ=60)
AGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAA > SRR4302532.1734594/1‑94 (MQ=60)
GCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAG < SRR4302532.3258613/94‑1 (MQ=60)
GCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAG < SRR4302532.398604/94‑1 (MQ=60)
GCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAG < SRR4302532.168552/94‑1 (MQ=60)
CCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGG < SRR4302532.674897/94‑1 (MQ=60)
CGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGT > SRR4302532.724686/1‑94 (MQ=60)
CGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGT > SRR4302532.724685/1‑94 (MQ=60)
GACATGAACCGCTTTGTGGTGGCTGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTT < SRR4302532.3617047/94‑1 (MQ=60)
ACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTT > SRR4302532.1124957/1‑94 (MQ=60)
ACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTT < SRR4302532.4496543/94‑1 (MQ=60)
TGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACA < SRR4302532.2447011/94‑1 (MQ=60)
GAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTAGAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAG > SRR4302532.4105892/1‑94 (MQ=60)
GAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAG < SRR4302532.5494359/94‑1 (MQ=60)
ACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCA > SRR4302532.1315002/1‑94 (MQ=60)
ACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCA < SRR4302532.6019875/94‑1 (MQ=60)
CGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAAC < SRR4302532.3367212/94‑1 (MQ=60)
CGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAAC < SRR4302532.2325904/94‑1 (MQ=60)
CTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACAC < SRR4302532.1721760/94‑1 (MQ=60)
CTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACAC < SRR4302532.884146/94‑1 (MQ=60)
TGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCG < SRR4302532.2010704/94‑1 (MQ=60)
TGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCG < SRR4302532.4281134/94‑1 (MQ=60)
TGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCG > SRR4302532.3301108/1‑94 (MQ=60)
TGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCG < SRR4302532.5827121/94‑1 (MQ=60)
TGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCT < SRR4302532.4009501/94‑1 (MQ=60)
GGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTG > SRR4302532.1235156/1‑94 (MQ=60)
CCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGC > SRR4302532.1942838/1‑94 (MQ=60)
CCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGC < SRR4302532.3386022/94‑1 (MQ=60)
CGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCC > SRR4302532.4692660/1‑94 (MQ=60)
GAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCC > SRR4302532.4695800/1‑94 (MQ=60)
ACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTG < SRR4302532.821558/94‑1 (MQ=60)
ACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTG < SRR4302532.3205042/94‑1 (MQ=60)
ACCACTGTGGCGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTG > SRR4302532.4065851/1‑94 (MQ=60)
CCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGG < SRR4302532.5151350/94‑1 (MQ=60)
CCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGG < SRR4302532.3515389/94‑1 (MQ=60)
CCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGG < SRR4302532.3075171/94‑1 (MQ=60)
CACTGTGGTGTACAGGATGTAATGCCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGC < SRR4302532.3444026/94‑1 (MQ=60)
CACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGC > SRR4302532.2542399/1‑94 (MQ=60)
CACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGC > SRR4302532.4486866/1‑94 (MQ=60)
CACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGC < SRR4302532.5950923/94‑1 (MQ=60)
CTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGA > SRR4302532.2796436/1‑94 (MQ=60)
GTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAG > SRR4302532.3129158/1‑94 (MQ=60)
GGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGAC < SRR4302532.3328548/94‑1 (MQ=60)
GTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTA > SRR4302532.1215345/1‑94 (MQ=60)
CAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAAC < SRR4302532.2158871/94‑1 (MQ=60)
AGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACA < SRR4302532.4410597/94‑1 (MQ=60)
GGATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAA < SRR4302532.5254874/94‑1 (MQ=60)
ATGTAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATC < SRR4302532.526318/94‑1 (MQ=60)
GTAATACCTGTCTCGCTGCCTTTTCGGACGTGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCAC < SRR4302532.94476/94‑1 (MQ=60)
TAATACCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACT < SRR4302532.3377997/94‑1 (MQ=60)
TAATACCTGTCTCGCTGCCTGTTCGGACGAGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGACCCTGGCGGAGACGTCCACAATCACT > SRR4302532.3453938/1‑94 (MQ=60)
AATACCTGCCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCACCACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTG < SRR4302532.5285186/94‑1 (MQ=60)
CCTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCC < SRR4302532.1753740/94‑1 (MQ=60)
CTGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCT > SRR4302532.2243681/1‑94 (MQ=60)
TGTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGCCGTCACAAATCACTGCCCCTT > SRR4302532.2152525/1‑94 (MQ=60)
GTCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGT > SRR4302532.5062188/1‑94 (MQ=60)
GTCGCGCTGCCTGTTCGGTCGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGT > SRR4302532.5673471/1‑94 (MQ=60)
TCTCGCTGCCTGTTCGGACGTGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTC < SRR4302532.5327049/94‑1 (MQ=60)
TCTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTC > SRR4302532.3555977/1‑94 (MQ=60)
CTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCG < SRR4302532.3857447/94‑1 (MQ=60)
CTCGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCG < SRR4302532.3857446/94‑1 (MQ=60)
CGTTGCCTGTCCTGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGTCTGGCCCTGGCGAAGACGTCAATAATCACAGCCCCTGGCGTG > SRR4302532.5686289/1‑94 (MQ=60)
CGCTGCCTGTTCGGACGCGCATAAAACGCCAGGTTTACAGCCACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCGCCTGTCGTG > SRR4302532.3387609/1‑94 (MQ=60)
CGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCACCACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTG < SRR4302532.801259/94‑1 (MQ=60)
CGCTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTG > SRR4302532.2449960/1‑94 (MQ=60)
CTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTG > SRR4302532.399352/1‑94 (MQ=60)
CTGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTG < SRR4302532.429980/94‑1 (MQ=60)
TGCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGT > SRR4302532.5966806/1‑94 (MQ=60)
GCCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTC > SRR4302532.4226370/1‑94 (MQ=60)
CCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGGCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCA > SRR4302532.5927032/1‑94 (MQ=60)
CCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCA > SRR4302532.164141/1‑94 (MQ=60)
CCTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCA > SRR4302532.3125100/1‑94 (MQ=60)
CTGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCAT < SRR4302532.3105525/94‑1 (MQ=60)
TGTTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATC > SRR4302532.6272666/1‑94 (MQ=60)
TTCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCAC > SRR4302532.146179/1‑94 (MQ=60)
TCGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACT < SRR4302532.347030/94‑1 (MQ=60)
TCGAACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACT < SRR4302532.384591/94‑1 (MQ=60)
CGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTG < SRR4302532.3455151/94‑1 (MQ=60)
CGGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTG > SRR4302532.6256896/1‑94 (MQ=60)
GGACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGT > SRR4302532.5005052/1‑94 (MQ=60)
GACGCGCATAAAACGCAAGGTTTCCAGCAACCCCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTG < SRR4302532.5625421/94‑1 (MQ=60)
GACGCGCATAAAACGCAAGGTTTACAGCAACCCCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTG < SRR4302532.4611413/94‑1 (MQ=60)
GACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTG < SRR4302532.3869565/94‑1 (MQ=60)
GACGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTG < SRR4302532.4672381/94‑1 (MQ=60)
CGCGCATAAAACGCACGATTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTAAAAACTGTGAG < SRR4302532.5683930/94‑1 (MQ=60)
CGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTGAG > SRR4302532.3034110/1‑94 (MQ=60)
CGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTGAG > SRR4302532.3426189/1‑94 (MQ=60)
CGCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTGAG > SRR4302532.1906771/1‑94 (MQ=60)
GCGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTGAGG < SRR4302532.5338341/94‑1 (MQ=60)
CGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGTAGACGACAACAATCACTGCACCTGTCGTGTGTCATCACTGTGTGGA > SRR4302532.3096243/1‑94 (MQ=60)
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TCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTGAGGA > NC_000913/2599202‑2599387
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
