Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,623,346 |
T→C |
L71P (CTG→CCG) |
ppx → |
exopolyphosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,623,346 | 0 | T | C | 93.5%
| 481.1
/ 16.4
| 155 | L71P (CTG→CCG) | ppx | exopolyphosphatase |
| Reads supporting (aligned to +/- strand): ref base T (4/6); new base C (66/79); total (70/85) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 |
Only 100 of 158 total aligned reads displayed.
CTGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGAC > NC_000913/2623255‑2623434
|
tGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGt > 1:4989618/1‑93 (MQ=255)
aaaCAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGttt < 2:4563682/93‑1 (MQ=255)
aaaCAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGttt < 2:2503719/93‑1 (MQ=255)
aaaCAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGttt < 2:157361/93‑1 (MQ=255)
aCAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGc < 2:213522/93‑1 (MQ=255)
aGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCg > 2:4898052/1‑93 (MQ=255)
aGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCg < 2:4125386/93‑1 (MQ=255)
aGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCg > 1:1601344/1‑93 (MQ=255)
gCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGa > 2:1233947/1‑93 (MQ=255)
cGGGTGCATCTGGCGGACGGCGTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGaa < 2:3150779/93‑1 (MQ=255)
cGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGaa < 2:5984623/93‑1 (MQ=255)
gggTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAAc < 1:3066859/93‑1 (MQ=255)
gggTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAAc < 1:5408849/93‑1 (MQ=255)
ggTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACg < 2:3423214/93‑1 (MQ=255)
ggTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACg > 2:710397/1‑93 (MQ=255)
tCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACa > 2:1476579/1‑93 (MQ=255)
tCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACa > 1:1085169/1‑93 (MQ=255)
cTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACaa < 2:1143608/93‑1 (MQ=255)
cTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACaa < 1:2474175/93‑1 (MQ=255)
tGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAg > 2:5374498/1‑93 (MQ=255)
tGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAg < 2:1594706/93‑1 (MQ=255)
tGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAg > 2:1796637/1‑93 (MQ=255)
cGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGt < 1:2836607/93‑1 (MQ=255)
ggACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGCACGGCTACAAgggat > 2:2090543/1‑91 (MQ=255)
ggACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGtt > 2:5656546/1‑93 (MQ=255)
gACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGttt > 2:2286756/1‑93 (MQ=255)
aCGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGtttt < 1:5352139/93‑1 (MQ=255)
cGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTtc < 2:4969072/93‑1 (MQ=255)
cGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTtc < 1:1152000/93‑1 (MQ=255)
ggCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTtct < 1:5813914/93‑1 (MQ=255)
cTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCt > 1:279615/1‑93 (MQ=255)
cTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCt > 1:1090427/1‑93 (MQ=255)
gggCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGcc > 1:3688500/1‑93 (MQ=255)
ggCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCa > 1:3899071/1‑93 (MQ=255)
ggCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCa < 2:4802877/93‑1 (MQ=255)
ccAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGc > 2:4579774/1‑93 (MQ=255)
ccAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGc > 1:1419442/1‑93 (MQ=255)
cAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCg < 1:1654971/93‑1 (MQ=255)
gATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTc > 1:5365957/1‑93 (MQ=255)
gATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTc < 1:16621/93‑1 (MQ=255)
gATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTc > 1:225748/1‑93 (MQ=255)
taataTGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTCCAAGGGTTTTCTCCTGCCAGCGTCTg < 1:4018353/93‑1 (MQ=255)
taataTGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTg < 1:1849567/93‑1 (MQ=255)
aataTGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGt < 1:3749371/93‑1 (MQ=255)
atatGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGta > 2:1347795/1‑93 (MQ=255)
tatGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGtat > 2:1692634/1‑93 (MQ=255)
atGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGtata < 1:921331/93‑1 (MQ=255)
tGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAg > 2:2724783/1‑93 (MQ=255)
tGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAg > 2:4781626/1‑93 (MQ=255)
ttGAGTGAAGAGGCAATGACGCGCGGTTTAAGCTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGtt > 2:4866730/1‑93 (MQ=255)
ttGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGtt > 1:1445821/1‑93 (MQ=255)
gAGTGACGAGGCCATGACGCGCGGTTTAAACTGTCTGTCGCTGATTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTgg < 1:5492676/93‑1 (MQ=255)
gAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTgg > 1:2093217/1‑93 (MQ=255)
gAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTgg < 1:5047816/93‑1 (MQ=255)
aGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGt < 1:4780609/93‑1 (MQ=255)
aaGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTAccc < 1:3960477/93‑1 (MQ=255)
agagGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCa < 1:2244133/93‑1 (MQ=255)
agagGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCa < 2:2225023/93‑1 (MQ=255)
gagGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCAt > 1:4632840/1‑93 (MQ=255)
gagGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCAt > 2:5337396/1‑93 (MQ=255)
ggCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATAc < 1:5613593/93‑1 (MQ=255)
ggCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATAc > 2:227951/1‑93 (MQ=255)
gCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACg < 2:202640/93‑1 (MQ=255)
gCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACg > 2:593907/1‑93 (MQ=255)
aTGACGCGCGGTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTg > 2:5115155/1‑93 (MQ=255)
aTGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTGTAGTTGGTACCCATACGCTg < 1:5934225/93‑1 (MQ=255)
aTGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATCCGCTg > 2:1688917/1‑93 (MQ=255)
aTGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTg > 2:5660299/1‑93 (MQ=255)
tGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGc > 2:2506341/1‑93 (MQ=255)
tGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGc < 2:1157293/93‑1 (MQ=255)
tGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGc > 2:3894677/1‑93 (MQ=255)
tGACGCACGGTTTAACCTGTCGGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGc < 1:48910/93‑1 (MQ=255)
aCGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGt < 1:1418586/93‑1 (MQ=255)
aCGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGt < 2:4229799/93‑1 (MQ=255)
cgcgcgGTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTc < 1:869473/93‑1 (MQ=255)
cgcgcgGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACGAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTc < 1:1104969/93‑1 (MQ=255)
cgcgcgGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTc < 2:2473419/93‑1 (MQ=255)
cgcgcgGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTc < 2:3225060/93‑1 (MQ=255)
cgcgcgGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTc < 2:4990552/93‑1 (MQ=255)
cgcgcgGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTc < 1:1758565/93‑1 (MQ=255)
gcgcgGTTTAAACTGTCTGTCGCCGTTTGCGGAACGGCTACAAGGGTGTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCa < 1:3636426/93‑1 (MQ=255)
gcgcgGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCa < 2:2674713/93‑1 (MQ=255)
ccggggTTTAAACTGTCTGTCGCCGTGTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATCCGCTGCGTCa < 1:2043179/89‑1 (MQ=255)
ccgGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAgg < 2:1766186/92‑1 (MQ=255)
cgGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGgc < 2:4076967/93‑1 (MQ=255)
cgGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGgc < 1:331518/93‑1 (MQ=255)
ggTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGgcg > 2:2241560/1‑93 (MQ=255)
gTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGgcgc > 2:3906831/1‑93 (MQ=255)
gTTTAAACTGTCTGTCGCCGGTTGCCGAACGGCCACAAGGGCTTTCTCCTGCCAGCGTCTGGATAGTTGGGACCCATACGCCGCGTCAGgcgc > 1:4772835/1‑93 (MQ=255)
tttAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCt > 1:6022988/1‑93 (MQ=255)
tttAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCt > 1:2562337/1‑93 (MQ=255)
ttAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTg > 2:1022845/1‑93 (MQ=255)
tAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGa > 1:175900/1‑93 (MQ=255)
aaaaTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGaa > 1:150679/1‑93 (MQ=255)
aaaCTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGaa < 2:4242553/93‑1 (MQ=255)
ctgtctgtCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGc < 1:4374061/93‑1 (MQ=255)
gtctgtcGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCa < 2:5319749/93‑1 (MQ=255)
tctgtcGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCAc < 1:769728/93‑1 (MQ=255)
gtcGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGa > 1:3546578/1‑93 (MQ=255)
tcGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGAc < 2:513482/93‑1 (MQ=255)
|
CTGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGAC > NC_000913/2623255‑2623434
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCTGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGACTTTCT > NC_000913/2623253‑2623439
|
GCCTGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCC < SRR4302532.966434/94‑1 (MQ=60)
CCTGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCTG > SRR4302532.4104617/1‑94 (MQ=60)
CTGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGT < SRR4302532.646815/94‑1 (MQ=60)
CTGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGT > SRR4302532.5160643/1‑94 (MQ=60)
TGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTT > SRR4302532.5405659/1‑94 (MQ=60)
AAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTG > SRR4302532.2003356/1‑94 (MQ=60)
ACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCC < SRR4302532.379743/94‑1 (MQ=60)
CAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCG > SRR4302532.6205296/1‑94 (MQ=60)
CAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCG > SRR4302532.1655546/1‑94 (MQ=60)
AGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGA > SRR4302532.4749809/1‑94 (MQ=60)
GGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACG < SRR4302532.5596253/94‑1 (MQ=60)
GGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACG < SRR4302532.3168187/94‑1 (MQ=60)
GGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCTGTTTTCCGAACGG < SRR4302532.6043611/94‑1 (MQ=60)
ATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACA > SRR4302532.1121519/1‑94 (MQ=60)
CTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAG < SRR4302532.2556568/94‑1 (MQ=60)
CTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAG > SRR4302532.1502293/1‑94 (MQ=60)
CGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTT < SRR4302532.2620484/94‑1 (MQ=60)
CGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTT < SRR4302532.2931434/94‑1 (MQ=60)
ACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTC < SRR4302532.5537772/94‑1 (MQ=60)
CGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCT < SRR4302532.1190439/94‑1 (MQ=60)
GGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTC < SRR4302532.6015880/94‑1 (MQ=60)
CCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCT > SRR4302532.289304/1‑94 (MQ=60)
CCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCT > SRR4302532.1126912/1‑94 (MQ=60)
CTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTG > SRR4302532.3263985/1‑94 (MQ=60)
CTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTC > SRR4302532.3927006/1‑94 (MQ=60)
GGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCC > SRR4302532.4887023/1‑94 (MQ=60)
GGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCC > SRR4302532.3812353/1‑94 (MQ=60)
GGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCA > SRR4302532.4030582/1‑94 (MQ=60)
GCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGC > SRR4302532.2261968/1‑94 (MQ=60)
GCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGC > SRR4302532.1467083/1‑94 (MQ=60)
CCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCG > SRR4302532.5706170/1‑94 (MQ=60)
CAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGT < SRR4302532.1710868/94‑1 (MQ=60)
CAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGT < SRR4302532.1711066/94‑1 (MQ=60)
AGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTC > SRR4302532.233459/1‑94 (MQ=60)
AGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTC > SRR4302532.5551945/1‑94 (MQ=60)
GATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCT < SRR4302532.17300/94‑1 (MQ=60)
ATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTG < SRR4302532.2905935/94‑1 (MQ=60)
ATAATATGTTGAGTGAAGAGGCAATGACGCACGGTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTG < SRR4302532.1197102/94‑1 (MQ=60)
TAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTCCAAGGGTTTTCTCCTGCCAGCGTCTGT < SRR4302532.4153764/94‑1 (MQ=60)
TAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGT < SRR4302532.1910954/94‑1 (MQ=60)
AATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTA < SRR4302532.3875421/94‑1 (MQ=60)
TATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAGGGGTTTTCTCCTGCCAGCGTCTGTATA < SRR4302532.6234544/94‑1 (MQ=60)
ATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAG < SRR4302532.952876/94‑1 (MQ=60)
GTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTT > SRR4302532.1494578/1‑94 (MQ=60)
TGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGG > SRR4302532.2163034/1‑94 (MQ=60)
GAGTGACGAGGCCATGACGCGCGGTTTAAACTGTCTGTCGCTGATTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGT < SRR4302532.5683146/94‑1 (MQ=60)
GAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGT < SRR4302532.5221007/94‑1 (MQ=60)
AGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTA < SRR4302532.4945243/94‑1 (MQ=60)
TGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACC < SRR4302532.1477045/94‑1 (MQ=60)
AAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCA < SRR4302532.4093920/94‑1 (MQ=60)
AAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCA > SRR4302532.1137102/1‑94 (MQ=60)
AGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCAT > SRR4302532.4790801/1‑94 (MQ=60)
AGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCAT < SRR4302532.2318613/94‑1 (MQ=60)
GGCAATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACG < SRR4302532.5808384/94‑1 (MQ=60)
ATGACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTGTAGTTGGTACCCATACGCTGC < SRR4302532.6139612/94‑1 (MQ=60)
TGACGCACGGTTTAACCTGTCGGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCG < SRR4302532.50638/94‑1 (MQ=60)
ACGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTC < SRR4302532.1466194/94‑1 (MQ=60)
CGCGCGGTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCA < SRR4302532.899254/94‑1 (MQ=60)
CGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACGAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCA < SRR4302532.1141905/94‑1 (MQ=60)
CGCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCA < SRR4302532.1817579/94‑1 (MQ=60)
ccggGGTTTAAACTGTCTGTCGCCGTGTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATCCGCTGCGTCAG < SRR4302532.2111219/90‑1 (MQ=60)
GCGCGGTTTAAACTGTCTGTCGCCGTTTGCGGAACGGCTACAAGGGTGTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAG < SRR4302532.3758426/94‑1 (MQ=60)
GCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAG < SRR4302532.1768677/94‑1 (MQ=60)
GCGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAG < SRR4302532.2460078/94‑1 (MQ=60)
CGCGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGG < SRR4302532.5046377/94‑1 (MQ=60)
CGGTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCG < SRR4302532.343019/94‑1 (MQ=60)
GGTTTAAACTGTCTGTCGCCGGTTGCCGAACGGCCACAAGGGCTTTCTCCTGCCAGCGTCTGGATAGTTGGGACCCATACGCCGCGTCAGGCGC > SRR4302532.4937139/1‑94 (MQ=60)
GTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCT > SRR4302532.6230986/1‑94 (MQ=60)
GTTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCT > SRR4302532.2647834/1‑94 (MQ=60)
TTTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTG > SRR4302532.1033754/1‑94 (MQ=60)
TTAAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGA > SRR4302532.181789/1‑94 (MQ=60)
TAAAATGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAA > SRR4302532.155724/1‑94 (MQ=60)
AAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAAC < SRR4302532.1850086/94‑1 (MQ=60)
AAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAAC > SRR4302532.5184285/1‑94 (MQ=60)
AAACTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAAC < SRR4302532.5561112/94‑1 (MQ=60)
CTGTCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCC < SRR4302532.4522510/94‑1 (MQ=60)
TCTGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACT < SRR4302532.796299/94‑1 (MQ=60)
TGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGA < SRR4302532.3722256/94‑1 (MQ=60)
TGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGA > SRR4302532.3665250/1‑94 (MQ=60)
TGTCGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGA > SRR4302532.866161/1‑94 (MQ=60)
CGCCGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGACTT > SRR4302532.4493860/1‑94 (MQ=60)
TGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGACTTTAT > SRR4302532.1288986/1‑94 (MQ=60)
CGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGACTTTCT > SRR4302532.4652442/1‑94 (MQ=60)
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GCCTGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGACTTTCT > NC_000913/2623253‑2623439
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
