Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,812,859 |
Δ1 bp |
intergenic (‑105/+46) |
ygaG ← / ← gshA |
hypothetical protein/gamma‑glutamate‑cysteine ligase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,812,858 | 0 | C | . | 100.0%
| 746.0
/ NA
| 159 | intergenic (‑104/+47) | ygaG/gshA | hypothetical protein/gamma‑glutamate‑cysteine ligase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (108/51); total (108/51) |
Only 100 of 175 total aligned reads displayed.
CGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATC > NC_000913/2812766‑2812946
|
ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTca > 2:3515450/1‑92 (MQ=255)
ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTca < 2:3669086/93‑2 (MQ=255)
tAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcaga > 1:6005699/1‑90 (MQ=255)
aaTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcagag > 2:3373396/1‑89 (MQ=255)
tttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGAt > 2:239200/1‑93 (MQ=255)
tttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGAt < 2:4866928/93‑1 (MQ=255)
ttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGaa > 2:650964/1‑93 (MQ=255)
ttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAAt > 2:2218521/1‑93 (MQ=255)
ttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAAt > 1:6001698/1‑93 (MQ=255)
ttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAAt > 2:1625355/1‑93 (MQ=255)
aaaaTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAAtttt < 2:4887311/93‑1 (MQ=255)
aaTTTTCTGACCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTgg < 1:2472251/93‑1 (MQ=255)
ttttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGcc > 2:4042746/1‑93 (MQ=255)
ttttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGcc > 2:1094999/1‑93 (MQ=255)
ttttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGcc < 2:4962460/93‑1 (MQ=255)
tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGNATT‑CAGAGATGAAATTTTGGCCa > 2:3118541/1‑93 (MQ=255)
tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCa > 1:5754487/1‑93 (MQ=255)
ttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAc < 2:2664257/93‑1 (MQ=255)
tCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACt > 2:2657859/1‑93 (MQ=255)
tGAACTCTTTCTTCCCAGGCGGGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGTTGAAATTTTGGCAACTCa > 2:5129678/1‑93 (MQ=255)
tGAACTCTTTCTTCCCAGGCGAGTCTGAGAATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCa > 2:2280849/1‑93 (MQ=255)
gAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAc > 1:3053276/1‑93 (MQ=255)
aaCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACg > 1:3028940/1‑93 (MQ=255)
aaCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACg > 1:337434/1‑93 (MQ=255)
aCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGa > 1:5019782/1‑93 (MQ=255)
tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAgg > 1:240724/1‑92 (MQ=255)
tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAgg > 1:863168/1‑92 (MQ=255)
tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAgg > 2:1648297/1‑92 (MQ=255)
tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGt > 1:956478/1‑93 (MQ=255)
tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGt < 1:536390/93‑1 (MQ=255)
ctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTg < 1:2060495/93‑1 (MQ=255)
ctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTg < 2:3666964/93‑1 (MQ=255)
ctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTg < 2:58233/93‑1 (MQ=255)
tttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTgg > 1:5110396/1‑93 (MQ=255)
ttcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGc > 2:1114354/1‑93 (MQ=255)
tcttcCCAGGCGAGTGTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGcc < 2:1368646/93‑1 (MQ=255)
tcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGcc > 1:4915101/1‑93 (MQ=255)
tcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGcc > 2:4482872/1‑93 (MQ=255)
cttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCt > 2:3917863/1‑93 (MQ=255)
ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CTGAGATGAAATTTTGGCCACTCACGAGTGGCCtt > 2:5929849/1‑93 (MQ=255)
ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtt > 2:2404605/1‑93 (MQ=255)
tcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttt < 2:1965555/93‑1 (MQ=255)
tcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttt > 2:5979579/1‑93 (MQ=255)
tcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttt < 1:4645320/93‑1 (MQ=255)
cAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttc > 2:1434199/1‑93 (MQ=255)
aGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttct > 1:1906729/1‑93 (MQ=255)
ggCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctt < 1:1503680/93‑1 (MQ=255)
ggCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctt > 2:1193460/1‑93 (MQ=255)
ggCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctt > 2:2310345/1‑93 (MQ=255)
cGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctttt < 1:1277344/93‑1 (MQ=255)
gAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttttc < 2:4168880/93‑1 (MQ=255)
gAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttttc > 1:1825199/1‑93 (MQ=255)
gAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttttc > 2:5662415/1‑93 (MQ=255)
gTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTg > 1:194090/1‑93 (MQ=255)
gTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTg > 1:2356615/1‑93 (MQ=255)
gAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAg < 2:2106947/93‑1 (MQ=255)
aGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAgg < 1:86456/93‑1 (MQ=255)
aGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAgg > 1:5409933/1‑93 (MQ=255)
gTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGc > 2:870061/1‑93 (MQ=255)
gTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGc > 1:2579631/1‑93 (MQ=255)
tataTGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCg > 1:3724433/1‑93 (MQ=255)
tataTGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCg > 1:4735663/1‑93 (MQ=255)
atatGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgt > 1:972354/1‑93 (MQ=255)
tatGAAAGACGCGCATTTGTTATCATCATCCCTGCATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtg < 1:5152603/93‑1 (MQ=255)
tatGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtg > 1:1697161/1‑93 (MQ=255)
tatGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGCCgtg > 1:4258671/1‑93 (MQ=255)
atGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtgt > 2:5368406/1‑93 (MQ=255)
atGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtgt < 2:723923/93‑1 (MQ=255)
tGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtt > 2:5439610/1‑93 (MQ=255)
aaGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttttt > 1:5244771/1‑93 (MQ=255)
gACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTcc > 2:1888566/1‑93 (MQ=255)
aCGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCa > 2:3695962/1‑93 (MQ=255)
aCGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCa < 2:4312644/93‑1 (MQ=255)
aCGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCa < 2:3468155/93‑1 (MQ=255)
cgcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGcc > 2:3112500/1‑93 (MQ=255)
cgcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTCTCTGTCAGGCGTGTTTTTCCAGcc > 1:4473587/1‑93 (MQ=255)
cgcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGACACTCACGAGGGGCCTTTTTCTTGTCTGTCAGGCGGGTTTTTTCAggc > 1:4473586/1‑91 (MQ=255)
gcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCGTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCca > 2:2983132/1‑93 (MQ=255)
cATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcac > 1:2806147/1‑93 (MQ=255)
tttGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCacac > 1:3814442/1‑93 (MQ=255)
tttGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCacac < 1:4257324/93‑1 (MQ=255)
ttGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACAcc > 2:5370713/1‑93 (MQ=255)
ttGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACAcc < 2:3054931/93‑1 (MQ=255)
tATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCTAGCCACACCGcta > 2:5708315/1‑91 (MQ=255)
atcatcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCaaa < 1:2781253/93‑1 (MQ=255)
catcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACg < 2:445597/93‑1 (MQ=255)
catcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACg < 1:762608/93‑1 (MQ=255)
atcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACgg > 2:5240495/1‑93 (MQ=255)
catcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGtt > 1:3852406/1‑93 (MQ=255)
atcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTc > 2:144687/1‑93 (MQ=255)
atcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTc > 2:4649165/1‑93 (MQ=255)
atcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTc > 2:3299905/1‑93 (MQ=255)
cccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCgg < 2:5634908/93‑1 (MQ=255)
cccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCgg > 1:1084680/1‑93 (MQ=255)
ccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGt > 2:4220163/1‑93 (MQ=255)
ccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGt < 1:102885/93‑1 (MQ=255)
cTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTa > 2:3644546/1‑93 (MQ=255)
cTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTa < 1:701037/93‑1 (MQ=255)
tGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTAt > 2:3605110/1‑93 (MQ=255)
tGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTAt > 1:170544/1‑93 (MQ=255)
|
CGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATC > NC_000913/2812766‑2812946
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGCGGC > NC_000913/2812768‑2812952
|
GTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGA > SRR4302532.1933550/1‑94 (MQ=60)
GTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGA > SRR4302532.6213085/1‑94 (MQ=60)
TAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAG > SRR4302532.3016855/1‑94 (MQ=60)
TTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGA < SRR4302532.5277397/94‑1 (MQ=60)
TTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAA > SRR4302532.1002800/1‑94 (MQ=60)
TTTTTAAAAATTTTCTGAACTCTTTCGTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATGTGTTATCATCATCCCTGAATT‑CAGAGATGAA < SRR4302532.2510062/94‑1 (MQ=60)
TTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAAT > SRR4302532.6208972/1‑94 (MQ=60)
TTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATT > SRR4302532.4573401/1‑94 (MQ=60)
AATTTTCTGACCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGC < SRR4302532.2554578/94‑1 (MQ=60)
TTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCA > SRR4302532.5954771/1‑94 (MQ=60)
TCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTC < SRR4302532.5338583/94‑1 (MQ=60)
TGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCTTCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAC > SRR4302532.529214/1‑94 (MQ=60)
TGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAC > SRR4302532.3154082/1‑94 (MQ=60)
GAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACG > SRR4302532.3128903/1‑94 (MQ=60)
GAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACG > SRR4302532.349121/1‑94 (MQ=60)
AACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGA > SRR4302532.5191941/1‑94 (MQ=60)
CTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGT > SRR4302532.989137/1‑94 (MQ=60)
CTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGG > SRR4302532.892783/1‑94 (MQ=60)
CTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGG > SRR4302532.249029/1‑94 (MQ=60)
TCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTG < SRR4302532.555078/94‑1 (MQ=60)
CTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGG > SRR4302532.5286106/1‑94 (MQ=60)
CTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGG < SRR4302532.2129134/94‑1 (MQ=60)
CTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGG > SRR4302532.874552/1‑94 (MQ=60)
TTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGC > SRR4302532.5581737/1‑94 (MQ=60)
TTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCC > SRR4302532.5083953/1‑94 (MQ=60)
TTCCAGGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGCCCACTCACGAGTGGCCTTT > SRR4302532.350887/1‑94 (MQ=60)
TCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTT < SRR4302532.4803702/94‑1 (MQ=60)
CCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTT < SRR4302532.5050532/94‑1 (MQ=60)
CCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACCCACGAGGGGCCTTTTT > SRR4302532.1238514/1‑94 (MQ=60)
CAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCT > SRR4302532.3356261/1‑94 (MQ=60)
CAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCT > SRR4302532.1488585/1‑94 (MQ=60)
CAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCT > SRR4302532.1969992/1‑94 (MQ=60)
AGGCTAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTCTCCACTCACGAGTGGCCTTTTTCTT > SRR4302532.6196942/1‑94 (MQ=60)
AGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTT < SRR4302532.754885/94‑1 (MQ=60)
GGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTT < SRR4302532.1984916/94‑1 (MQ=60)
GGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTT < SRR4302532.1554437/94‑1 (MQ=60)
CGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTC > SRR4302532.1885969/1‑94 (MQ=60)
CGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTC < SRR4302532.1320082/94‑1 (MQ=60)
AGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTG > SRR4302532.2435236/1‑94 (MQ=60)
AGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTG > SRR4302532.200642/1‑94 (MQ=60)
GAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGG > SRR4302532.5597386/1‑94 (MQ=60)
AGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGC < SRR4302532.89514/94‑1 (MQ=60)
AGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGC > SRR4302532.2665829/1‑94 (MQ=60)
GTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCG > SRR4302532.3849502/1‑94 (MQ=60)
GTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCG > SRR4302532.4897338/1‑94 (MQ=60)
TATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGT > SRR4302532.1005525/1‑94 (MQ=60)
ATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTG > SRR4302532.1754429/1‑94 (MQ=60)
ATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTG > SRR4302532.2880236/1‑94 (MQ=60)
ATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTG < SRR4302532.385524/94‑1 (MQ=60)
ATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGCCGTG > SRR4302532.4401938/1‑94 (MQ=60)
TATGAAAGACGCGCATTTGTTATCATCATCCCTGCATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGT < SRR4302532.5329865/94‑1 (MQ=60)
AAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT > SRR4302532.5425568/1‑94 (MQ=60)
ACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAG < SRR4302532.955893/94‑1 (MQ=60)
GCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTCTCTGTCAGGCGTGTTTTTCCAGCC > SRR4302532.4626155/1‑94 (MQ=60)
GCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGACACTCACGAGGGGCCTTTTTCTTGTCTGTCAGGCGGGTTTTTTCAGGC > SRR4302532.4626154/1‑94 (MQ=60)
GCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCAC > SRR4302532.186225/1‑94 (MQ=60)
GCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCAC > SRR4302532.2900143/1‑94 (MQ=60)
CATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACA > SRR4302532.5873116/1‑94 (MQ=60)
ATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACAC > SRR4302532.3943223/1‑94 (MQ=60)
ATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACAC > SRR4302532.2723376/1‑94 (MQ=60)
TTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACC < SRR4302532.4400528/94‑1 (MQ=60)
TTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACC < SRR4302532.4400529/94‑1 (MQ=60)
TTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTTCAGCCACACCG > SRR4302532.2445496/1‑94 (MQ=60)
TATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAA > SRR4302532.4695590/1‑94 (MQ=60)
ATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAC > SRR4302532.6072136/1‑94 (MQ=60)
ATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAC < SRR4302532.2874550/94‑1 (MQ=60)
CATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGG < SRR4302532.788885/94‑1 (MQ=60)
TCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTT > SRR4302532.3982471/1‑94 (MQ=60)
CATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTC < SRR4302532.4299324/94‑1 (MQ=60)
TCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGG > SRR4302532.1121017/1‑94 (MQ=60)
TCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGG < SRR4302532.2369332/94‑1 (MQ=60)
CCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGT > SRR4302532.3551024/1‑94 (MQ=60)
CCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTA < SRR4302532.106447/94‑1 (MQ=60)
CTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTAT < SRR4302532.725015/94‑1 (MQ=60)
CTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTAT > SRR4302532.176259/1‑94 (MQ=60)
GAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCA < SRR4302532.4817402/94‑1 (MQ=60)
AATT‑CAGAGATGAAATTTTGGCCACTCGCGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACGCCGCAAACGGTTCGGTATCAG < SRR4302532.1039698/94‑1 (MQ=60)
AATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAG < SRR4302532.5892153/94‑1 (MQ=60)
AATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTCCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAG < SRR4302532.1898457/94‑1 (MQ=60)
ATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGC < SRR4302532.4703162/94‑1 (MQ=60)
ATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGC > SRR4302532.5046134/1‑94 (MQ=60)
ATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGGTTTTCCAGCCACACCGCAAACGGATCGGTATCAGC > SRR4302532.3867079/1‑94 (MQ=60)
CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGCGGC > SRR4302532.5659353/1‑94 (MQ=60)
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GTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGCGGC > NC_000913/2812768‑2812952
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
