Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,075,220 |
(T)5→6 |
coding (256/357 nt) |
yggP ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,075,215 | 1 | . | T | 99.4%
| 656.4
/ ‑3.6
| 176 | coding (261/357 nt) | yggP | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base T (86/89); total (86/90) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.53e-01 |
Only 100 of 198 total aligned reads displayed.
ATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA > NC_000913/3075123‑3075302
|
ataAGTGGCATTGCCGCCAAAATTTTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑cc < 1:4274992/93‑1 (MQ=255)
taAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑t > 1:1371869/1‑93 (MQ=255)
taAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑t > 2:3687899/1‑93 (MQ=255)
taAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑t > 1:3262450/1‑93 (MQ=255)
aaGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tt < 2:5512307/93‑1 (MQ=255)
aaGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tt > 1:5610532/1‑93 (MQ=255)
aGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑ttt < 1:4573758/93‑1 (MQ=255)
ggCATTGCCGCCACAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tttttt < 2:5461912/93‑2 (MQ=255)
ggCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tttttt > 1:951466/1‑92 (MQ=255)
ggCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tttttt > 1:4902701/1‑92 (MQ=255)
gCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tttttta < 1:1007180/93‑3 (MQ=255)
aTTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑ttttttata < 1:3513502/93‑5 (MQ=255)
tGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAtt < 2:459561/93‑1 (MQ=255)
tGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAtt < 2:6046151/93‑1 (MQ=255)
gccgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAttt < 1:5719157/93‑1 (MQ=255)
gccgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAttt < 1:2623825/93‑1 (MQ=255)
ccgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTg < 2:5532733/93‑1 (MQ=255)
cgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGc < 2:4026479/93‑1 (MQ=255)
gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGcc < 1:381330/93‑1 (MQ=255)
ccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCa < 2:2921939/93‑1 (MQ=255)
ccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCa < 1:883472/93‑1 (MQ=255)
cAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAg > 2:1421094/1‑93 (MQ=255)
cAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAg < 1:291024/93‑1 (MQ=255)
aaaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGt < 2:964668/93‑1 (MQ=255)
aaaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGt < 2:4400427/93‑1 (MQ=255)
aaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTg < 1:4064486/93‑1 (MQ=255)
aaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTga > 1:5900180/1‑93 (MQ=255)
aaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTga < 2:3496032/93‑1 (MQ=255)
aaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTga > 2:4438382/1‑93 (MQ=255)
atatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTgag < 2:2491774/93‑1 (MQ=255)
atatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTgag < 1:5780789/93‑1 (MQ=255)
tatTCGTAGCTGTAGCCCGCTGAATATCTGCTTGGGAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTgaga > 1:2833830/1‑93 (MQ=255)
tatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTgaga < 2:661966/93‑1 (MQ=255)
tatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTgaga > 2:2284862/1‑93 (MQ=255)
cGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGAtttt > 2:3302416/1‑93 (MQ=255)
gTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGAttttt < 2:3867721/93‑1 (MQ=255)
tAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTa > 1:2423830/1‑93 (MQ=255)
gCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTAcc < 1:2365914/93‑1 (MQ=255)
gCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTAcc > 1:5804279/1‑93 (MQ=255)
tGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCa > 2:1372657/1‑93 (MQ=255)
gTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCAc > 2:2594876/1‑93 (MQ=255)
gCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTc > 1:5240722/1‑93 (MQ=255)
cccGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCg > 2:534652/1‑93 (MQ=255)
ccGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGa < 2:1018417/93‑1 (MQ=255)
gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACa < 1:4736249/93‑1 (MQ=255)
cTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACaa > 2:2590189/1‑93 (MQ=255)
cTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACaa < 2:5118444/93‑1 (MQ=255)
tGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAAt > 2:4714408/1‑93 (MQ=255)
gAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATa < 1:1875853/93‑1 (MQ=255)
aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATaa > 2:434983/1‑93 (MQ=255)
aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATaa < 1:555569/93‑1 (MQ=255)
atatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAc > 1:1500640/1‑93 (MQ=255)
atatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAc < 1:958022/93‑1 (MQ=255)
tatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcc > 2:1472047/1‑93 (MQ=255)
ccGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCg > 2:5874154/1‑93 (MQ=255)
cGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCgg > 2:4844011/1‑93 (MQ=255)
gCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGc > 1:2794070/1‑93 (MQ=255)
gCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCCGc > 1:5101295/1‑93 (MQ=255)
cTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATCACCCCGGca > 2:1105981/1‑93 (MQ=255)
cTTGGTAACCCCATCGCCGGTTGCAAGACAAAACGCTGG‑CC‑TTTTTAAGATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGca < 1:3634103/93‑1 (MQ=255)
ttGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGcac > 2:2358942/1‑93 (MQ=255)
gTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAtt > 2:1585844/1‑93 (MQ=255)
tAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTc > 2:2160485/1‑93 (MQ=255)
atccccATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCa < 1:583812/91‑1 (MQ=255)
aaCCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCa < 2:3199131/93‑1 (MQ=255)
aCCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAt < 2:4855636/93‑1 (MQ=255)
cccATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCCCATTCATGc > 2:4175179/1‑93 (MQ=255)
cccATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGc > 1:1123767/1‑93 (MQ=255)
cccATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGc < 1:3742789/93‑1 (MQ=255)
cccATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGc > 2:109945/1‑93 (MQ=255)
cATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGccc < 2:2730889/93‑1 (MQ=255)
cATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGccc < 2:4956521/93‑1 (MQ=255)
aTCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCg < 2:1212698/93‑1 (MQ=255)
tCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCgg > 2:908265/1‑93 (MQ=255)
ccGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATGACCCCGGCACATTCATGCCCGGTaa < 1:3655043/93‑1 (MQ=255)
cgattGCAATACAAAACGCTGGTCT‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt < 1:1006166/90‑1 (MQ=255)
cGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt < 1:4297127/93‑1 (MQ=255)
ggTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATg > 2:6096957/1‑93 (MQ=255)
ggTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATg > 1:5012462/1‑93 (MQ=255)
gTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa > 2:3661795/1‑93 (MQ=255)
gTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa > 1:5502437/1‑93 (MQ=255)
ttGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc > 2:5660944/1‑93 (MQ=255)
tGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAcc > 1:1760146/1‑93 (MQ=255)
tGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAcc < 1:2964978/93‑1 (MQ=255)
cAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCgg > 2:3900324/1‑93 (MQ=255)
aTACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCTGCACATTCATGCCCGGTAATGACCGgat > 1:773678/1‑93 (MQ=255)
aTACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgat > 1:3120735/1‑93 (MQ=255)
aTACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgat > 1:4186971/1‑93 (MQ=255)
tACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatg > 1:1661094/1‑93 (MQ=255)
tACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatg < 1:3449817/93‑1 (MQ=255)
aaaaCGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtt > 1:663193/1‑93 (MQ=255)
aaCGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtttt > 2:3072160/1‑93 (MQ=255)
aaCGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtttt < 2:2645444/93‑1 (MQ=255)
aCGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTc > 1:634095/1‑93 (MQ=255)
cGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCt < 1:2495833/93‑1 (MQ=255)
gCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTa < 1:1653399/93‑1 (MQ=255)
cTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaa < 1:2309152/93‑1 (MQ=255)
cTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaa > 1:4366437/1‑93 (MQ=255)
tGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa > 1:4201502/1‑93 (MQ=255)
tGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa < 2:1796249/93‑1 (MQ=255)
|
ATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA > NC_000913/3075123‑3075302
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC > NC_000913/3075128‑3075313
|
TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑TTTTT‑T > SRR4302532.5071181/1‑94 (MQ=60)
TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑TTTTT‑T > SRR4302532.983982/1‑94 (MQ=60)
GCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑TTTTT‑‑TAT < SRR4302532.1041436/94‑1 (MQ=60)
CATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATA > SRR4302532.6074638/1‑94 (MQ=60)
ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAT < SRR4302532.3631149/94‑1 (MQ=60)
ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAT > SRR4302532.53920/1‑94 (MQ=60)
ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAT > SRR4302532.53919/1‑94 (MQ=60)
ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAT > SRR4302532.5940120/1‑94 (MQ=60)
ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAT > SRR4302532.136559/1‑94 (MQ=60)
TGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTT > SRR4302532.5131273/1‑94 (MQ=60)
GCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTG < SRR4302532.5918389/94‑1 (MQ=60)
GCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTG < SRR4302532.2711682/94‑1 (MQ=60)
CGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCC < SRR4302532.4243182/94‑1 (MQ=60)
CGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCC > SRR4302532.1058090/1‑94 (MQ=60)
GCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCA < SRR4302532.394638/94‑1 (MQ=60)
CCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAG < SRR4302532.913675/94‑1 (MQ=60)
CCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAG < SRR4302532.6196795/94‑1 (MQ=60)
CCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAG < SRR4302532.68485/94‑1 (MQ=60)
CCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAG > SRR4302532.791482/1‑94 (MQ=60)
CAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGT < SRR4302532.301056/94‑1 (MQ=60)
AAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTG > SRR4302532.3955265/1‑94 (MQ=60)
AAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGA < SRR4302532.4201058/94‑1 (MQ=60)
AAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGA > SRR4302532.6104496/1‑94 (MQ=60)
AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAG < SRR4302532.5436553/94‑1 (MQ=60)
AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAG < SRR4302532.855516/94‑1 (MQ=60)
ATATTCGTAGCTGTAGCCCGCTGAATATCTGCTTGGGAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGA > SRR4302532.2928580/1‑94 (MQ=60)
ATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGA < SRR4302532.5981858/94‑1 (MQ=60)
TATTCGCAGCTGTAGCCCGCTGAATATCCGCTTGGTAACACCATCGCCGGTTGCAATACAAAACGCTGC‑CC‑TTTTTtatactctccagcgagat > SRR4302532.1984026/1‑76 (MQ=60)
ATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATT > SRR4302532.3058951/1‑94 (MQ=60)
TTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTT < SRR4302532.2510553/94‑1 (MQ=60)
TTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTT < SRR4302532.2938619/94‑1 (MQ=60)
GTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTA < SRR4302532.5190109/94‑1 (MQ=60)
GTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTA > SRR4302532.2504386/1‑94 (MQ=60)
AGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACC < SRR4302532.5943824/94‑1 (MQ=60)
AGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACC > SRR4302532.6005979/1‑94 (MQ=60)
GCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCC < SRR4302532.2444827/94‑1 (MQ=60)
GCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCC < SRR4302532.1473177/94‑1 (MQ=60)
CTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCA < SRR4302532.3663395/94‑1 (MQ=60)
TGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCAC > SRR4302532.3772036/1‑94 (MQ=60)
TGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCAC > SRR4302532.4383553/1‑94 (MQ=60)
AGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTC > SRR4302532.5421406/1‑94 (MQ=60)
GCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAGTACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCG < SRR4302532.5395451/94‑1 (MQ=60)
CCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGAC > SRR4302532.5836321/1‑94 (MQ=60)
CCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGAC > SRR4302532.4439131/1‑94 (MQ=60)
GCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAA < SRR4302532.4897949/94‑1 (MQ=60)
GAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAA < SRR4302532.5726083/94‑1 (MQ=60)
GAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAA < SRR4302532.1557523/94‑1 (MQ=60)
GAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAA < SRR4302532.1937988/94‑1 (MQ=60)
GAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAA < SRR4302532.2831018/94‑1 (MQ=60)
AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC > SRR4302532.1551275/1‑94 (MQ=60)
AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC < SRR4302532.2422096/94‑1 (MQ=60)
AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC < SRR4302532.574955/94‑1 (MQ=60)
ATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACC < SRR4302532.990726/94‑1 (MQ=60)
CCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGG < SRR4302532.3247488/94‑1 (MQ=60)
CGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGC > SRR4302532.2887744/1‑94 (MQ=60)
CGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGC > SRR4302532.2888080/1‑94 (MQ=60)
CGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCCGC > SRR4302532.5276681/1‑94 (MQ=60)
CTTGGTAACCCCATCGCCGGTTGCAAGACAAAACGCTGG‑CC‑TTTTTAAGATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCAC < SRR4302532.3756013/94‑1 (MQ=60)
TGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAT < SRR4302532.6019101/94‑1 (MQ=60)
ATCCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT < SRR4302532.604171/94‑1 (MQ=60)
AACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACGCCGGCACATTCAT > SRR4302532.4479905/1‑94 (MQ=60)
AACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT < SRR4302532.5988253/94‑1 (MQ=60)
ACTCCATCGCCGATTGCAATACAAATCGCTGG‑CCTTTTTT‑ATATTTGCAAGTGAGATTTTTACCCACTTCTACAATAGCCCCGGCACATTCATG < SRR4302532.4538769/94‑1 (MQ=60)
CCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGC > SRR4302532.1161282/1‑94 (MQ=60)
CCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCC < SRR4302532.3868582/94‑1 (MQ=60)
CCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCC > SRR4302532.4330942/1‑94 (MQ=60)
CCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCC < SRR4302532.1823218/94‑1 (MQ=60)
CCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCAACTTCGACAATAACCCCGGCACATTCATGCCC > SRR4302532.920917/1‑94 (MQ=60)
CATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCG > SRR4302532.992238/1‑94 (MQ=60)
ATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGG > SRR4302532.1779579/1‑94 (MQ=60)
TCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGC > SRR4302532.1709934/1‑94 (MQ=60)
GCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAA > SRR4302532.3847279/1‑94 (MQ=60)
CCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATGACCCCGGCACATTCATGCCCGGTAAT < SRR4302532.3777751/94‑1 (MQ=60)
CGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG < SRR4302532.4986708/94‑1 (MQ=60)
CGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG > SRR4302532.5184276/1‑94 (MQ=60)
CGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG < SRR4302532.4442293/94‑1 (MQ=60)
CGATTGCAATACAAAACGCTGGTCT‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG < SRR4302532.1040399/94‑1 (MQ=60)
GGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGA > SRR4302532.5693300/1‑94 (MQ=60)
TTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC > SRR4302532.1819195/1‑94 (MQ=60)
TGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCG < SRR4302532.3063176/94‑1 (MQ=60)
GCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGG > SRR4302532.3920238/1‑94 (MQ=60)
AATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCTGCACATTCATGCCCGGTAATGACCGGAT > SRR4302532.800349/1‑94 (MQ=60)
AATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGAT > SRR4302532.4327440/1‑94 (MQ=60)
AATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGAT > SRR4302532.3224284/1‑94 (MQ=60)
ATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATG > SRR4302532.1717380/1‑94 (MQ=60)
TACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGT > SRR4302532.1266482/1‑94 (MQ=60)
TACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGA < SRR4302532.3565371/94‑1 (MQ=60)
TACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGA < SRR4302532.3565369/94‑1 (MQ=60)
CAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATT > SRR4302532.686121/1‑94 (MQ=60)
AACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTC > SRR4302532.656220/1‑94 (MQ=60)
ACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCT < SRR4302532.5791617/94‑1 (MQ=60)
ACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCT < SRR4302532.344274/94‑1 (MQ=60)
CGCTGG‑CT‑TTTTT‑ATATTTTCCCGGGAGGTTTTTACCCACTTCGACAATAAACCCCGCACATTCATGCCCGGGAATGACCGGATGgttttttta > SRR4302532.6202946/1‑85 (MQ=48)
CGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTA < SRR4302532.2579047/94‑1 (MQ=60)
GCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAA > SRR4302532.4514547/1‑94 (MQ=60)
GCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAA < SRR4302532.1709430/94‑1 (MQ=60)
CTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA > SRR4302532.264494/1‑94 (MQ=60)
CTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA > SRR4302532.4342538/1‑94 (MQ=60)
CTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA < SRR4302532.2385971/94‑1 (MQ=60)
TGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT < SRR4302532.2498425/94‑1 (MQ=60)
cctTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGCATGATTTTCTAAATCGT < SRR4302532.4309217/91‑1 (MQ=60)
CT‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC < SRR4302532.999717/94‑1 (MQ=60)
CT‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC < SRR4302532.3078039/94‑1 (MQ=60)
TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGG > SRR4302532.5336799/1‑94 (MQ=60)
TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGG > SRR4302532.5336800/1‑94 (MQ=60)
TTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGG < SRR4302532.4645015/94‑1 (MQ=60)
TTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGG > SRR4302532.1305969/1‑94 (MQ=60)
T‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC < SRR4302532.724402/94‑1 (MQ=60)
T‑ATATTTGCCAGTGAGATTTTTACCCACTTCCACAATAACCCCGGCCCATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC < SRR4302532.724401/94‑1 (MQ=60)
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TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC > NC_000913/3075128‑3075313
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
