Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,236,177 |
Δ1 bp |
intergenic (+239/‑45) |
ygjR → / → ygjT |
hypothetical protein/putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,236,176 | 0 | G | . | 100.0%
| 1058.9
/ NA
| 227 | intergenic (+238/‑46) | ygjR/ygjT | hypothetical protein/putative transport protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (110/117); total (110/117) |
Only 100 of 243 total aligned reads displayed.
GGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTG > NC_000913/3236084‑3236264
|
ggCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTg > 2:4206888/1‑93 (MQ=255)
gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTga < 1:1578029/93‑2 (MQ=255)
gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTga < 1:2221093/93‑2 (MQ=255)
cAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgac < 2:5192604/93‑3 (MQ=255)
cAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgac < 1:4883961/93‑3 (MQ=255)
aCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgacgt > 1:2693022/1‑89 (MQ=255)
cccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTc < 1:1451677/93‑1 (MQ=255)
cccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTc > 2:4365180/1‑93 (MQ=255)
ccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCt < 1:5134453/93‑1 (MQ=255)
cGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCtt < 1:945481/93‑1 (MQ=255)
aaaGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTcc > 2:5503275/1‑93 (MQ=255)
aGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGa < 2:118234/93‑1 (MQ=255)
aGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGa < 2:1690496/93‑1 (MQ=255)
ggAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGAc > 2:3210816/1‑93 (MQ=255)
gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACg < 2:45382/93‑1 (MQ=255)
aaTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGt < 2:4561911/93‑1 (MQ=255)
aCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTgg > 2:2918389/1‑93 (MQ=255)
aGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGt > 1:5465228/1‑93 (MQ=255)
gACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtt < 2:2406833/93‑1 (MQ=255)
aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGttt < 2:4030396/93‑1 (MQ=255)
cGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttt > 1:4236762/1‑93 (MQ=255)
tATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttttt > 2:5228364/1‑93 (MQ=255)
tATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttttt < 1:3741505/93‑1 (MQ=255)
tATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttttt > 2:4348997/1‑93 (MQ=255)
tATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttttt > 2:5396669/1‑93 (MQ=255)
aTTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGttttttt < 2:5621944/93‑1 (MQ=255)
aTTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGttttttt > 1:2737121/1‑93 (MQ=255)
ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTa < 1:3116746/93‑1 (MQ=255)
ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTa < 1:3005838/93‑1 (MQ=255)
ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCCAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTa < 2:4689207/93‑1 (MQ=255)
tCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAt > 1:1948494/1‑93 (MQ=255)
cTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAtgt < 1:1647915/93‑1 (MQ=255)
ttttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAtgtg > 2:6001847/1‑93 (MQ=255)
tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATgtgt > 1:2633628/1‑93 (MQ=255)
ttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa > 1:5053808/1‑93 (MQ=255)
ttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa > 2:650300/1‑93 (MQ=255)
ttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa < 2:540925/93‑1 (MQ=255)
ttgttgTAAGTGAGACCTTGCCGGAAGGCGCGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAg < 2:5760531/93‑1 (MQ=255)
ttgttgTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAg < 1:6025519/93‑1 (MQ=255)
tgttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAgg > 2:2338383/1‑93 (MQ=255)
tgttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAgg > 1:3383597/1‑93 (MQ=255)
gttgtAAGTGAGTCCTTGCCGGAAGGCGAGGTCTATGCATAAGAAGCAGCGGCT‑GACGGCTTCCGACGTTGGCCGTTTTTTTATGTGTGAGGa > 1:5807199/1‑93 (MQ=255)
ttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa > 1:1320873/1‑93 (MQ=255)
aaGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTc < 2:1483718/93‑1 (MQ=255)
gTGAGACCTTGCCGGTAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAAATTCtc < 1:5486404/93‑2 (MQ=255)
tGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCtct > 1:3678939/1‑91 (MQ=255)
tGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTAt > 2:500956/1‑93 (MQ=255)
tGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTAt < 2:2635807/93‑1 (MQ=255)
gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATg > 2:4801150/1‑93 (MQ=255)
gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATg < 1:3999604/93‑1 (MQ=255)
agaCCTTGCCGGAAGGCGTGGACTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGCTTTTTTATGTGTAAGGGACTTCTATGa > 2:696200/1‑93 (MQ=255)
agaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGa < 2:1019566/93‑1 (MQ=255)
agaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGa < 2:1627704/93‑1 (MQ=255)
gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGaa > 2:4934745/1‑93 (MQ=255)
ccTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATa < 1:5591994/93‑1 (MQ=255)
cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATAc < 2:617561/93‑1 (MQ=255)
ttGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACt > 2:2291781/1‑93 (MQ=255)
ttGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACt > 1:4348871/1‑93 (MQ=255)
ttGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACt > 2:3071922/1‑93 (MQ=255)
ttGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACt > 1:1774661/1‑93 (MQ=255)
ttGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACt > 1:3478619/1‑93 (MQ=255)
gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTTTATGCATACtct > 2:1966073/1‑91 (MQ=255)
ccGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTc < 1:4502838/93‑1 (MQ=255)
ccGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTc > 1:5337534/1‑93 (MQ=255)
ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCgg > 2:3358407/1‑93 (MQ=255)
ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCgg > 2:5272628/1‑93 (MQ=255)
gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGc > 1:1032155/1‑93 (MQ=255)
aaGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTTGGCa > 1:4620785/1‑93 (MQ=255)
aaGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 1:4765459/93‑1 (MQ=255)
aGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCAc > 2:318571/1‑93 (MQ=255)
ggCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACg > 2:720505/1‑93 (MQ=255)
gCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGc < 1:3604067/93‑1 (MQ=255)
gAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg < 2:39184/93‑1 (MQ=255)
gAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg > 2:3563084/1‑93 (MQ=255)
gtctCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTGGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACGGTCGGCACGCCGt < 1:5396443/90‑1 (MQ=255)
aGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGt < 2:2817853/93‑1 (MQ=255)
aGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGt > 1:4576668/1‑93 (MQ=255)
ggTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGtt < 2:3619194/93‑1 (MQ=255)
gTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTg < 2:3828531/93‑1 (MQ=255)
tCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGc > 2:6029776/1‑93 (MQ=255)
aTGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTAt < 1:2647334/93‑1 (MQ=255)
aTGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTAt > 2:1828129/1‑93 (MQ=255)
tGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATg > 2:2689246/1‑93 (MQ=255)
gCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgg > 2:3897653/1‑93 (MQ=255)
gCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgg < 1:3812905/93‑1 (MQ=255)
aTAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgggg < 1:1387793/93‑1 (MQ=255)
tAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGc > 1:2861893/1‑93 (MQ=255)
aaaGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa < 1:5342287/93‑1 (MQ=255)
aaaGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa > 2:5883597/1‑93 (MQ=255)
agcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt < 1:639069/93‑1 (MQ=255)
agcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt < 1:3926172/93‑1 (MQ=255)
agcagcGGCT‑GACGTCTTACGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt < 1:3534266/93‑1 (MQ=255)
gcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc < 2:115567/93‑1 (MQ=255)
gcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc > 2:566015/1‑93 (MQ=255)
gcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc < 2:1450693/93‑1 (MQ=255)
gcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc > 1:2365737/1‑93 (MQ=255)
gcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc > 2:4136296/1‑93 (MQ=255)
gcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCt > 1:6140809/1‑93 (MQ=255)
gcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCt > 2:3432041/1‑93 (MQ=255)
cGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtg < 2:1360887/93‑1 (MQ=255)
|
GGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTG > NC_000913/3236084‑3236264
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTG > NC_000913/3236086‑3236270
|
CAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACG < SRR4302532.5051869/94‑1 (MQ=60)
AACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGT > SRR4302532.2783478/1‑94 (MQ=60)
CCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCT < SRR4302532.1500621/94‑1 (MQ=60)
CCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTT > SRR4302532.3173967/1‑94 (MQ=60)
CCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTT > SRR4302532.2708889/1‑94 (MQ=60)
CCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTT < SRR4302532.428926/94‑1 (MQ=60)
CCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTT < SRR4302532.5311072/94‑1 (MQ=60)
CGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTC < SRR4302532.977850/94‑1 (MQ=60)
CGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTC < SRR4302532.5525088/94‑1 (MQ=60)
AGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGAC > SRR4302532.378695/1‑94 (MQ=60)
GGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACG < SRR4302532.4731769/94‑1 (MQ=60)
ATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTG < SRR4302532.3376920/94‑1 (MQ=60)
ATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTG < SRR4302532.6152879/94‑1 (MQ=60)
ATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTG > SRR4302532.3706735/1‑94 (MQ=60)
CGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCC < SRR4302532.6360916/94‑1 (MQ=60)
CAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGT > SRR4302532.5654711/1‑94 (MQ=60)
CAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGT < SRR4302532.2544848/94‑1 (MQ=60)
ACGTATTCCTTTTTTGTTGTAAGTGAGCCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTT < SRR4302532.5906246/94‑1 (MQ=60)
ACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTT > SRR4302532.4379052/1‑94 (MQ=60)
ACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGACTTCCGACGTTGGCCGGTTT > SRR4302532.3879293/1‑94 (MQ=60)
CGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTT > SRR4302532.1732692/1‑94 (MQ=60)
CGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTT < SRR4302532.2937202/94‑1 (MQ=60)
CGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGACGTTTTT > SRR4302532.1447286/1‑94 (MQ=60)
GTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTT > SRR4302532.5746436/1‑94 (MQ=60)
TATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGGCGTTTTTTT > SRR4302532.4778933/1‑94 (MQ=60)
TATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTT < SRR4302532.3867244/94‑1 (MQ=60)
TATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTT > SRR4302532.2829111/1‑94 (MQ=60)
TATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTT < SRR4302532.1685663/94‑1 (MQ=60)
ATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTA < SRR4302532.5723508/94‑1 (MQ=60)
ATTCCTGTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTA < SRR4302532.3814536/94‑1 (MQ=60)
TTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAT > SRR4302532.2013272/1‑94 (MQ=60)
TTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAT < SRR4302532.3220154/94‑1 (MQ=60)
TTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAT < SRR4302532.3105082/94‑1 (MQ=60)
TTCATTTTGTGTTGTAAGTGAGTCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAT < SRR4302532.5629288/94‑1 (MQ=60)
TCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATG > SRR4302532.4335521/1‑94 (MQ=60)
TCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATG > SRR4302532.4931103/1‑94 (MQ=60)
CCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGT > SRR4302532.2745376/1‑94 (MQ=60)
CTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTG < SRR4302532.2362278/94‑1 (MQ=60)
CTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTG < SRR4302532.1703750/94‑1 (MQ=60)
TTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGT > SRR4302532.2721872/1‑94 (MQ=60)
TTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTA > SRR4302532.1088860/1‑94 (MQ=60)
TTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTA > SRR4302532.5227262/1‑94 (MQ=60)
TTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAG < SRR4302532.4034817/94‑1 (MQ=60)
TTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGG < SRR4302532.6233627/94‑1 (MQ=60)
TTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGG < SRR4302532.1845434/94‑1 (MQ=60)
TTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGG > SRR4302532.3496760/1‑94 (MQ=60)
TGTTGTAAGTGAGTCCTTGCCGGAAGGCGAGGTCTATGCATAAGAAGCAGCGGCT‑GACGGCTTCCGACGTTGGCCGTTTTTTTATGTGTGAGGA > SRR4302532.6008973/1‑94 (MQ=60)
TGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGA > SRR4302532.5555835/1‑94 (MQ=60)
GTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAA > SRR4302532.1365017/1‑94 (MQ=60)
GTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAA < SRR4302532.98195/94‑1 (MQ=60)
TTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAAC > SRR4302532.199624/1‑94 (MQ=60)
TGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACT > SRR4302532.3496893/1‑94 (MQ=60)
AAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCT < SRR4302532.1636632/94‑1 (MQ=60)
AGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTA > SRR4302532.5077070/1‑94 (MQ=60)
GTGAGACCTTGCCGGTAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAAATTCTCT < SRR4302532.5676635/94‑1 (MQ=60)
GTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTCT > SRR4302532.3802526/1‑94 (MQ=60)
GTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTAT > SRR4302532.3377148/1‑94 (MQ=60)
TGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTGTG > SRR4302532.616346/1‑94 (MQ=60)
TGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATG < SRR4302532.4769268/94‑1 (MQ=60)
GAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGA < SRR4302532.4134339/94‑1 (MQ=60)
CCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATAC < SRR4302532.5786107/94‑1 (MQ=60)
CTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACT < SRR4302532.2106277/94‑1 (MQ=60)
CTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACT > SRR4302532.1834094/1‑94 (MQ=60)
CTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACT > SRR4302532.4495873/1‑94 (MQ=60)
CTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACT > SRR4302532.3595139/1‑94 (MQ=60)
TGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGT < SRR4302532.1375039/94‑1 (MQ=60)
TGCCGGAAGGCGAGGTCTATGCACAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGT < SRR4302532.3605357/94‑1 (MQ=60)
GCCGGAAGGCGAGGTCTATGCATAAAGAGCAGCGGCT‑GCCGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTC < SRR4302532.5671047/94‑1 (MQ=60)
GCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTC < SRR4302532.1468091/94‑1 (MQ=60)
GCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTC > SRR4302532.5522651/1‑94 (MQ=60)
CCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GCCGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCG < SRR4302532.5089768/94‑1 (MQ=60)
CCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCG < SRR4302532.4656569/94‑1 (MQ=60)
GGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGC > SRR4302532.3945665/1‑94 (MQ=60)
GGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGC > SRR4302532.5594161/1‑94 (MQ=60)
GGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGC > SRR4302532.1067013/1‑94 (MQ=60)
GAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTTGGCA > SRR4302532.4778348/1‑94 (MQ=60)
GAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCAC < SRR4302532.1617441/94‑1 (MQ=60)
AAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCAC < SRR4302532.4496473/94‑1 (MQ=60)
AAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCAC < SRR4302532.4928810/94‑1 (MQ=60)
AGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACG < SRR4302532.4103756/94‑1 (MQ=60)
GCGAGGTCTATGCATAAAAATCAGCGGCT‑GACGTCTTCCGCCGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCC < SRR4302532.3724530/94‑1 (MQ=60)
GCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCC < SRR4302532.3724528/94‑1 (MQ=60)
CGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCG > SRR4302532.2726544/1‑94 (MQ=60)
GAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGT > SRR4302532.4732732/1‑94 (MQ=60)
gtcTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTGGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACGGTCGGCACGCCGTT < SRR4302532.5583417/91‑1 (MQ=60)
GGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTG < SRR4302532.3052871/94‑1 (MQ=60)
GGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTG < SRR4302532.5334232/94‑1 (MQ=60)
GTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGC > SRR4302532.2951018/1‑94 (MQ=60)
TCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCT > SRR4302532.2761840/1‑94 (MQ=60)
ATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATG > SRR4302532.491302/1‑94 (MQ=60)
ATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATG < SRR4302532.2736130/94‑1 (MQ=60)
ATGCATAAAAAGCAGCGGCT‑GACGTCCTCCCACGTTGGCCGTTATTTTATGTGTAAGGAACTTCTTTGCATACTGTGGGCCGCCCGTTGCTATG > SRR4302532.1254361/1‑94 (MQ=41)
TGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGG > SRR4302532.4436529/1‑94 (MQ=60)
GCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGG > SRR4302532.5512143/1‑94 (MQ=60)
GCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGG < SRR4302532.6325139/94‑1 (MQ=60)
GCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGG < SRR4302532.3941623/94‑1 (MQ=60)
ATAAAAAGCAGCGGCT‑GACGTCTTTCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCTGCACGCCGTTGCTATGGGGG > SRR4302532.842209/1‑94 (MQ=60)
ATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTTTGGGGC > SRR4302532.4586612/1‑94 (MQ=60)
ATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGC < SRR4302532.1434303/94‑1 (MQ=60)
ATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGC > SRR4302532.842208/1‑94 (MQ=60)
ATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGC > SRR4302532.2957593/1‑94 (MQ=60)
TAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCG < SRR4302532.3642449/94‑1 (MQ=60)
AAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGA > SRR4302532.5232237/1‑94 (MQ=60)
AAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAT < SRR4302532.5527628/94‑1 (MQ=60)
AGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTC < SRR4302532.661322/94‑1 (MQ=60)
AGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTC < SRR4302532.4058450/94‑1 (MQ=60)
AGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTC > SRR4302532.2444646/1‑94 (MQ=60)
AGCAGCGGCT‑GACGTCTTACGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTC < SRR4302532.3652524/94‑1 (MQ=60)
AGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCT > SRR4302532.6352635/1‑94 (MQ=60)
GGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTTGCTGTT > SRR4302532.6122753/1‑94 (MQ=60)
GGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTT > SRR4302532.3486047/1‑94 (MQ=60)
GGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTT < SRR4302532.4643954/94‑1 (MQ=60)
GGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTT > SRR4302532.2303372/1‑94 (MQ=60)
GGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTT > SRR4302532.909198/1‑94 (MQ=60)
GGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTT > SRR4302532.6347083/1‑94 (MQ=60)
GGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTT > SRR4302532.116707/1‑94 (MQ=60)
GGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTT < SRR4302532.278326/94‑1 (MQ=60)
GCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTG < SRR4302532.3394995/94‑1 (MQ=60)
TGACGTCTTCCGCCGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTT < SRR4302532.1936503/94‑1 (MQ=60)
TGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCCCGCCGTTGCTATGGGGCGGATTCGCTGTTGTT > SRR4302532.2739196/1‑94 (MQ=60)
TGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTT > SRR4302532.2977137/1‑94 (MQ=60)
TGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTT > SRR4302532.2596737/1‑94 (MQ=60)
TGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTT > SRR4302532.2596738/1‑94 (MQ=60)
TGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTT > SRR4302532.3941160/1‑94 (MQ=60)
GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTT > SRR4302532.5422587/1‑94 (MQ=60)
|
CAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTG > NC_000913/3236086‑3236270
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
