Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,472,030 G→A R54C (CGT→TGT)  rpsL ← 30S ribosomal subunit protein S12

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,472,0300GA98.7% 1152.1 / 0.1 311R54C (CGT→TGT) rpsL30S ribosomal subunit protein S12
Reads supporting (aligned to +/- strand):  ref base G (1/3);  new base A (136/171);  total (137/174)
Fisher's exact test for biased strand distribution p-value = 6.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.21e-01

Only 100 of 316 total aligned reads displayed.

CACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCA  >  NC_000913/3471940‑3472119
                                                                                          |                                                                                         
cACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGc                                                                                         >  2:3650248/1‑93 (MQ=255)
cACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGc                                                                                         >  2:3160800/1‑93 (MQ=255)
  cGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCAt                                                                                       >  1:2753166/1‑93 (MQ=255)
     atcaggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACt                                                                                    <  2:1233710/93‑1 (MQ=255)
     atcaggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACt                                                                                    <  2:2567946/93‑1 (MQ=255)
      tcaggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACtt                                                                                   >  1:363068/1‑93 (MQ=255)
      tcaggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACtt                                                                                   >  1:416980/1‑93 (MQ=255)
      tcaggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACtt                                                                                   <  2:2827560/93‑1 (MQ=255)
        aggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTa                                                                                 <  1:4014920/93‑1 (MQ=255)
        aggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTa                                                                                 <  1:1171233/93‑1 (MQ=255)
          gatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACg                                                                               >  1:3501627/1‑93 (MQ=255)
              ccGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc                                                                           <  1:6099043/92‑1 (MQ=255)
              aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGACACCGTTAGTCAGACGAACACAGCATACTTTAagcagc                                                                           >  1:901894/1‑93 (MQ=255)
              aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc                                                                           >  2:42298/1‑93 (MQ=255)
              aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc                                                                           >  1:4405235/1‑93 (MQ=255)
              aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc                                                                           <  1:3716294/93‑1 (MQ=255)
                ggAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgcgc                                                                         <  1:2658179/93‑1 (MQ=255)
                  ggTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCgg                                                                       <  2:2712033/92‑1 (MQ=255)
                   gTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGa                                                                      <  2:3366716/93‑1 (MQ=255)
                   gTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGa                                                                      >  2:3218914/1‑93 (MQ=255)
                    tGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAg                                                                     >  2:1146939/1‑93 (MQ=255)
                    tGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAg                                                                     >  1:4639106/1‑93 (MQ=255)
                    tGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAg                                                                     >  1:3014506/1‑93 (MQ=255)
                     gCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGt                                                                    >  1:776997/1‑93 (MQ=255)
                      cTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGtt                                                                   <  2:4866570/93‑1 (MQ=255)
                      cTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGtt                                                                   <  2:5658704/93‑1 (MQ=255)
                        ccTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCg                                                                 >  2:3784780/1‑93 (MQ=255)
                         cTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCgg                                                                <  1:1714574/93‑1 (MQ=255)
                          tGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACCCAGCATACTTTACGCAGCGCGGAGTTCGGt                                                               >  2:907593/1‑93 (MQ=255)
                          tGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGt                                                               >  2:4537174/1‑93 (MQ=255)
                          tGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGt                                                               <  2:5451599/93‑1 (MQ=255)
                          tGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGt                                                               <  1:112276/93‑1 (MQ=255)
                           gCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTTAGACGAACACAGCATACTTTATGCAGCGCGGAGTTCGGtt                                                              >  1:410728/1‑93 (MQ=255)
                           gCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGtt                                                              <  2:4155189/93‑1 (MQ=255)
                                ttGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTa                                                         <  2:4641848/93‑1 (MQ=255)
                                ttGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGCTCGGTTTTTTa                                                         >  2:87791/1‑93 (MQ=255)
                                 tgtgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAg                                                        <  2:1163026/93‑1 (MQ=255)
                                 tgtgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAg                                                        <  1:1331595/93‑1 (MQ=255)
                                 tgtgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAg                                                        <  2:1515052/93‑1 (MQ=255)
                                 tgtgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAg                                                        <  2:5917606/93‑1 (MQ=255)
                                 tgtgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAg                                                        <  1:4720664/93‑1 (MQ=255)
                                  gtgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAgg                                                       <  1:5464216/93‑1 (MQ=255)
                                   tgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATGCTTTACGCAGCGCGGAGTTCGGTTTTTTAGGa                                                      <  1:5158552/93‑1 (MQ=255)
                                   tgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGa                                                      <  2:443035/93‑1 (MQ=255)
                                     aCCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGt                                                    >  2:5633317/1‑93 (MQ=255)
                                      ccTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTg                                                   >  1:2596537/1‑93 (MQ=255)
                                        ttCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTgga                                                 >  2:3384713/1‑92 (MQ=255)
                                        ttCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgt                                                 >  1:2939367/1‑93 (MQ=255)
                                        ttCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgt                                                 >  2:608915/1‑93 (MQ=255)
                                           accaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtagt                                              >  1:5950976/1‑93 (MQ=255)
                                            ccaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtagta                                             >  1:2411183/1‑93 (MQ=255)
                                            ccaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtagta                                             <  1:1614075/93‑1 (MQ=255)
                                            ccaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtagta                                             <  2:3332901/93‑1 (MQ=255)
                                              accGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGtata                                           <  1:3850757/93‑1 (MQ=255)
                                                 gATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATac                                        <  2:1928276/93‑1 (MQ=255)
                                                 gATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATac                                        >  2:5324331/1‑93 (MQ=255)
                                                  aTGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATaca                                       <  1:2198773/93‑1 (MQ=255)
                                                  aTGTAGGAAGTCACTACGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATaca                                       <  1:501957/93‑1 (MQ=255)
                                                   tGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATacac                                      <  2:3446848/93‑1 (MQ=255)
                                                   tGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATacac                                      >  1:2027431/1‑93 (MQ=255)
                                                    gTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACg                                     >  1:330744/1‑93 (MQ=255)
                                                       ggAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTCGTATATACACGAGt                                  >  1:2235701/1‑93 (MQ=255)
                                                       ggAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGt                                  <  1:5733946/93‑1 (MQ=255)
                                                        gAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTa                                 <  2:5107236/93‑1 (MQ=255)
                                                         aaGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTAc                                <  2:2099671/93‑1 (MQ=255)
                                                           gTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGCGTGGTAGTATATACACGAGTACAt                              >  1:1966242/1‑93 (MQ=255)
                                                           gTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACAt                              <  1:1819720/93‑1 (MQ=255)
                                                            tCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATa                             <  2:4774566/93‑1 (MQ=255)
                                                            tCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATa                             <  1:100242/93‑1 (MQ=255)
                                                              aCTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACg                           >  2:5216059/1‑93 (MQ=255)
                                                                ttCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGcc                         <  1:986282/93‑1 (MQ=255)
                                                                ttCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGcc                         <  2:644097/93‑1 (MQ=255)
                                                                 tCGAGACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCa                        <  1:154419/93‑1 (MQ=255)
                                                                  cGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCAc                       >  1:3592809/1‑93 (MQ=255)
                                                                  cGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCAc                       <  1:1832202/93‑1 (MQ=255)
                                                                  cGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCAc                       <  1:1864637/93‑1 (MQ=255)
                                                                  cGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCAc                       <  2:5042851/93‑1 (MQ=255)
                                                                  cGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCAc                       >  2:1849489/1‑93 (MQ=255)
                                                                   gAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACg                      <  1:341909/93‑1 (MQ=255)
                                                                   gAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGAAGTAAAACAACGAGACATACGCCACGt                     >  1:1630933/1‑93 (MQ=255)
                                                                     aaCCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGGGTTGGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCAGGtt                    >  1:4467135/1‑93 (MQ=255)
                                                                     aaCCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGtt                    <  2:2945576/93‑1 (MQ=255)
                                                                        cGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGttttt                 >  2:2408705/1‑93 (MQ=255)
                                                                        cGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGttttt                 <  2:5723558/93‑1 (MQ=255)
                                                                        cGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGttttt                 >  1:5385022/1‑93 (MQ=255)
                                                                         gTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTg                <  2:2513203/93‑1 (MQ=255)
                                                                            aGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCgg             >  1:3084972/1‑93 (MQ=255)
                                                                            aGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCgg             <  1:4590648/93‑1 (MQ=255)
                                                                             gTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCggg            <  2:3697867/93‑1 (MQ=255)
                                                                             gTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCggg            >  1:2285453/1‑93 (MQ=255)
                                                                              tCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGGACATACGCCACGTTTTTGCGGGc           >  2:2284997/1‑93 (MQ=255)
                                                                                aGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACGCGAGTACATACGCCACGTTTTTGCGGGCAt         <  1:4268923/93‑1 (MQ=255)
                                                                                aGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAt         <  1:4819099/93‑1 (MQ=255)
                                                                                 gACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATg        >  2:3881409/1‑93 (MQ=255)
                                                                                    gAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCtt     >  2:3993615/1‑93 (MQ=255)
                                                                                    gAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCtt     >  1:5613376/1‑93 (MQ=255)
                                                                                      acacAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTcc   <  2:1373089/93‑1 (MQ=255)
                                                                                      acacAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTcc   >  1:1251459/1‑93 (MQ=255)
                                                                                       cacaGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCa  <  2:1748417/93‑1 (MQ=255)
                                                                                       cacaGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCa  <  1:1486488/93‑1 (MQ=255)
                                                                                          |                                                                                         
CACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCA  >  NC_000913/3471940‑3472119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGC  >  NC_000913/3471937‑3472123
                                                                                             |                                                                                             
CGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACA                                                                                               <  SRR4302532.5592298/94‑1 (MQ=60)
CGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACA                                                                                               >  SRR4302532.1664534/1‑94 (MQ=60)
CGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACA                                                                                               >  SRR4302532.423943/1‑94 (MQ=60)
 GCCACGGATCGGCGTCACGTAGTTCTCGTGCAGGTTGTGGCCTTCCCCTCCGATGTAGGAAGTAACTTCGAAGCCGTTAGTCAGACGAACACAG                                                                                              <  SRR4302532.2286588/94‑1 (MQ=32)
 GCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAG                                                                                              <  SRR4302532.6101791/94‑1 (MQ=60)
 GCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAG                                                                                              <  SRR4302532.763112/94‑1 (MQ=60)
 GCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAG                                                                                              <  SRR4302532.116127/94‑1 (MQ=60)
   CACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCA                                                                                            <  SRR4302532.4976472/94‑1 (MQ=60)
    ACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCAT                                                                                           <  SRR4302532.4413396/94‑1 (MQ=60)
    ACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCAT                                                                                           >  SRR4302532.2845632/1‑94 (MQ=60)
     CGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATA                                                                                          >  SRR4302532.3060988/1‑94 (MQ=60)
      GGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAGCCGTTAGTCAGACGAACACAGCATAC                                                                                         <  SRR4302532.4693492/94‑1 (MQ=60)
       GATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACT                                                                                        <  SRR4302532.1797099/94‑1 (MQ=60)
       GATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACT                                                                                        <  SRR4302532.3485190/94‑1 (MQ=60)
        ATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTT                                                                                       >  SRR4302532.1182427/1‑94 (MQ=60)
        ATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTT                                                                                       >  SRR4302532.431461/1‑94 (MQ=60)
        ATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTT                                                                                       >  SRR4302532.75291/1‑94 (MQ=60)
        ATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTT                                                                                       >  SRR4302532.375635/1‑94 (MQ=60)
        ATCAGGATCACGGAGTGCTCCTGCAGGATGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTT                                                                                       >  SRR4302532.5444286/1‑94 (MQ=60)
        AACAGGAGCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTT                                                                                       <  SRR4302532.1266502/94‑1 (MQ=60)
         TCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTT                                                                                      >  SRR4302532.5759763/1‑94 (MQ=60)
          CAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTA                                                                                     <  SRR4302532.5155413/94‑1 (MQ=60)
          CAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTA                                                                                     >  SRR4302532.1859763/1‑94 (MQ=60)
          CAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTA                                                                                     >  SRR4302532.2564038/1‑94 (MQ=60)
           AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTAC                                                                                    <  SRR4302532.4150203/94‑1 (MQ=60)
           AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTAC                                                                                    <  SRR4302532.1210375/94‑1 (MQ=60)
            GGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACG                                                                                   <  SRR4302532.2891976/94‑1 (MQ=60)
            GGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACG                                                                                   >  SRR4302532.3618927/1‑94 (MQ=60)
            GGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACG                                                                                   <  SRR4302532.3228924/94‑1 (MQ=60)
               TCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAG                                                                                <  SRR4302532.1633453/94‑1 (MQ=60)
               TCACGGAGGGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAG                                                                                >  SRR4302532.1401086/1‑94 (MQ=60)
                CACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGACACCGTTAGTCAGACGAACACAGCATACTTTAAGCAGC                                                                               >  SRR4302532.932665/1‑94 (MQ=60)
                CACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGC                                                                               <  SRR4302532.4093730/94‑1 (MQ=60)
                CACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGC                                                                               >  SRR4302532.3902723/1‑94 (MQ=60)
                CACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGC                                                                               >  SRR4302532.4555259/1‑94 (MQ=60)
                 CCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCG                                                                              <  SRR4302532.6309547/94‑1 (MQ=60)
                 ACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCG                                                                              <  SRR4302532.4567210/94‑1 (MQ=60)
                 ACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCG                                                                              <  SRR4302532.3841025/94‑1 (MQ=60)
                 ACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCG                                                                              <  SRR4302532.6037448/94‑1 (MQ=60)
                  CGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGC                                                                             <  SRR4302532.3955612/94‑1 (MQ=60)
                  CGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGC                                                                             <  SRR4302532.4019230/94‑1 (MQ=60)
                  CGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGC                                                                             >  SRR4302532.1964122/1‑94 (MQ=60)
                   GGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCG                                                                            >  SRR4302532.864021/1‑94 (MQ=60)
                   GGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCG                                                                            <  SRR4302532.2747395/94‑1 (MQ=60)
                    GAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGG                                                                           <  SRR4302532.1329875/94‑1 (MQ=60)
                     AGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGA                                                                          >  SRR4302532.6187957/1‑94 (MQ=60)
                      GTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAG                                                                         >  SRR4302532.3113995/1‑94 (MQ=60)
                      GTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAG                                                                         >  SRR4302532.4797277/1‑94 (MQ=60)
                      ATGCTCCTTCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACCCTACGCAGCGCGGAG                                                                         <  SRR4302532.2317210/94‑1 (MQ=60)
                       TGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGT                                                                        >  SRR4302532.803743/1‑94 (MQ=60)
                        GCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTT                                                                       <  SRR4302532.2639958/94‑1 (MQ=60)
                        GCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTT                                                                       <  SRR4302532.922884/94‑1 (MQ=60)
                        GCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTT                                                                       >  SRR4302532.31186/1‑94 (MQ=60)
                         CTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTC                                                                      >  SRR4302532.4600891/1‑94 (MQ=60)
                         CTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTC                                                                      <  SRR4302532.4951891/94‑1 (MQ=60)
                          TCCTGCAGGTTGTGCCCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCG                                                                     <  SRR4302532.2876508/94‑1 (MQ=60)
                          TCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCG                                                                     <  SRR4302532.2005003/94‑1 (MQ=60)
                          TCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCG                                                                     <  SRR4302532.4881112/94‑1 (MQ=60)
                          TCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCG                                                                     <  SRR4302532.662134/94‑1 (MQ=60)
                           CCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGG                                                                    <  SRR4302532.4514397/94‑1 (MQ=60)
                           CCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGG                                                                    <  SRR4302532.1453423/94‑1 (MQ=60)
                            CTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGT                                                                   <  SRR4302532.3671571/94‑1 (MQ=60)
                            CTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGT                                                                   <  SRR4302532.1772368/94‑1 (MQ=60)
                            CTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGT                                                                   <  SRR4302532.5168074/94‑1 (MQ=60)
                             TGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTTAGACGAACACAGCATACTTTATGCAGCGCGGAGTTCGGTT                                                                  >  SRR4302532.425045/1‑94 (MQ=60)
                             TGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTT                                                                  <  SRR4302532.116137/94‑1 (MQ=60)
                             TGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTT                                                                  <  SRR4302532.1162799/94‑1 (MQ=60)
                                AGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTT                                                               >  SRR4302532.430311/1‑94 (MQ=60)
                                  GTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTA                                                             >  SRR4302532.320455/1‑94 (MQ=60)
                                    TGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGG                                                           <  SRR4302532.4881728/94‑1 (MQ=60)
                                    TGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGG                                                           <  SRR4302532.1376103/94‑1 (MQ=60)
                                     GTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGA                                                          <  SRR4302532.5653666/94‑1 (MQ=60)
                                     GTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGA                                                          >  SRR4302532.1098997/1‑94 (MQ=60)
                                      TGCCCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATCCTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAG                                                         <  SRR4302532.5336063/94‑1 (MQ=60)
                                      TGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATGCTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAG                                                         <  SRR4302532.5336064/94‑1 (MQ=60)
                                       GACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGT                                                        <  SRR4302532.6229678/94‑1 (MQ=60)
                                        ACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTG                                                       >  SRR4302532.2683328/1‑94 (MQ=60)
                                          TTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGT                                                     >  SRR4302532.529591/1‑94 (MQ=60)
                                          CTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGT                                                     >  SRR4302532.3036992/1‑94 (MQ=60)
                                          CTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGT                                                     >  SRR4302532.975839/1‑94 (MQ=60)
                                          CTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGT                                                     >  SRR4302532.1915344/1‑94 (MQ=60)
                                           TTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTA                                                    <  SRR4302532.2400116/94‑1 (MQ=60)
                                           TTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTA                                                    <  SRR4302532.1702705/94‑1 (MQ=60)
                                           TTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTA                                                    <  SRR4302532.3552013/94‑1 (MQ=60)
                                             CACCACCGATGTAGGAAGTCACTTCGACACTGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGT                                                  <  SRR4302532.3761695/94‑1 (MQ=60)
                                             CACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGT                                                  <  SRR4302532.6333696/94‑1 (MQ=60)
                                             CACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGT                                                  >  SRR4302532.4789500/1‑94 (MQ=60)
                                             CACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGT                                                  >  SRR4302532.6156884/1‑94 (MQ=60)
                                              ACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTA                                                 >  SRR4302532.2491389/1‑94 (MQ=60)
                                               CCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTAT                                                <  SRR4302532.1668693/94‑1 (MQ=60)
                                                 ACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATAT                                              <  SRR4302532.3980775/94‑1 (MQ=60)
                                                 ACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATAT                                              >  SRR4302532.3742324/1‑94 (MQ=60)
                                                 ACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATAT                                              >  SRR4302532.1922555/1‑94 (MQ=60)
                                                 ACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATAT                                              >  SRR4302532.4792699/1‑94 (MQ=60)
                                                 ACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATAT                                              >  SRR4302532.3185764/1‑94 (MQ=60)
                                                  CCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA                                             <  SRR4302532.2566759/94‑1 (MQ=60)
                                                  CCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA                                             <  SRR4302532.220761/94‑1 (MQ=60)
                                                  CCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA                                             <  SRR4302532.5491979/94‑1 (MQ=60)
                                                  CCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA                                             >  SRR4302532.2289706/1‑94 (MQ=60)
                                                   CGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATAC                                            >  SRR4302532.1881030/1‑94 (MQ=60)
                                                   CGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATAC                                            >  SRR4302532.4162507/1‑94 (MQ=60)
                                                   CGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGCATATAC                                            >  SRR4302532.1671975/1‑94 (MQ=60)
                                                     ATGTAGGAAGTCACTTGGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACAC                                          >  SRR4302532.3714371/1‑94 (MQ=60)
                                                     ATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACAC                                          >  SRR4302532.2095009/1‑94 (MQ=60)
                                                     ATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACAC                                          >  SRR4302532.2095010/1‑94 (MQ=60)
                                                     ATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACAC                                          <  SRR4302532.2271980/94‑1 (MQ=60)
                                                     ATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACAC                                          >  SRR4302532.5593384/1‑94 (MQ=60)
                                                     ATGTAGGAAGTCACTACGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACAC                                          <  SRR4302532.519505/94‑1 (MQ=60)
                                                      TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACG                                         <  SRR4302532.4318789/94‑1 (MQ=60)
                                                      TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACG                                         >  SRR4302532.342220/1‑94 (MQ=60)
                                                       GTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGA                                        >  SRR4302532.2785674/1‑94 (MQ=60)
                                                        TAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAG                                       <  SRR4302532.2340131/94‑1 (MQ=60)
                                                        TAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAG                                       <  SRR4302532.5839691/94‑1 (MQ=60)
                                                         AGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTCGTATATACACGAGT                                      >  SRR4302532.2309885/1‑94 (MQ=60)
                                                         AGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGT                                      <  SRR4302532.5828534/94‑1 (MQ=60)
                                                         AGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGT                                      <  SRR4302532.189187/94‑1 (MQ=60)
                                                          ggtagtctcgTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGTGCGGAGTTCGGTTTTTTAGGAGCGGGAGTATATACACGAGTA                                     >  SRR4302532.5687435/11‑94 (MQ=60)
                                                          GGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTA                                     >  SRR4302532.2090704/1‑94 (MQ=60)
                                                          GGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTA                                     <  SRR4302532.5933608/94‑1 (MQ=60)
                                                             AGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGCGTGGTAGTATATACACGAGTACAT                                  >  SRR4302532.2031555/1‑94 (MQ=60)
                                                             AGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACAT                                  <  SRR4302532.3999390/94‑1 (MQ=60)
                                                              GTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATA                                 <  SRR4302532.1880366/94‑1 (MQ=60)
                                                              GTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATA                                 >  SRR4302532.3344630/1‑94 (MQ=60)
                                                              GTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATA                                 >  SRR4302532.2462262/1‑94 (MQ=60)
                                                              GTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATA                                 <  SRR4302532.6053560/94‑1 (MQ=60)
                                                               TCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATAC                                <  SRR4302532.103721/94‑1 (MQ=60)
                                                               TCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATAC                                <  SRR4302532.3185159/94‑1 (MQ=60)
                                                                CACTTCGAAACCGTTAGTCAGACGACCACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACG                               >  SRR4302532.2810103/1‑94 (MQ=60)
                                                                 ACTTGGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTAAATACGC                              >  SRR4302532.4691192/1‑94 (MQ=60)
                                                                 ACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATAGGC                              >  SRR4302532.1304206/1‑94 (MQ=60)
                                                                 ACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGC                              <  SRR4302532.2734921/94‑1 (MQ=60)
                                                                 ACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGC                              <  SRR4302532.2734920/94‑1 (MQ=60)
                                                                 ACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGC                              >  SRR4302532.3684829/1‑94 (MQ=60)
                                                                  CTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCC                             <  SRR4302532.1739473/94‑1 (MQ=60)
                                                                  CTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCC                             <  SRR4302532.429740/94‑1 (MQ=60)
                                                                   TTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCA                            <  SRR4302532.1019973/94‑1 (MQ=60)
                                                                    TCGAGACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCAC                           <  SRR4302532.159566/94‑1 (MQ=60)
                                                                    TCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCAC                           >  SRR4302532.3712969/1‑94 (MQ=60)
                                                                    TCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCAC                           <  SRR4302532.159565/94‑1 (MQ=60)
                                                                     CGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACG                          >  SRR4302532.1678320/1‑94 (MQ=60)
                                                                     CGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACG                          >  SRR4302532.165945/1‑94 (MQ=60)
                                                                     CGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACG                          <  SRR4302532.1926419/94‑1 (MQ=60)
                                                                     CGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACG                          <  SRR4302532.1893149/94‑1 (MQ=60)
                                                                     CGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGAAGTAAAACAACGAGACATACGCCACGT                         >  SRR4302532.1686143/1‑94 (MQ=60)
                                                                      GAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGT                         >  SRR4302532.5524952/1‑94 (MQ=60)
                                                                      GAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGT                         <  SRR4302532.353765/94‑1 (MQ=60)
                                                                       AAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGGGTTGGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCAGGTT                        >  SRR4302532.4619438/1‑94 (MQ=60)
                                                                        AACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTT                       >  SRR4302532.1653054/1‑94 (MQ=60)
                                                                         ACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTT                      >  SRR4302532.2297298/1‑94 (MQ=60)
                                                                          CCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCATGTTTTT                     >  SRR4302532.4637845/1‑94 (MQ=60)
                                                                          CCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTT                     >  SRR4302532.5571551/1‑94 (MQ=60)
                                                                           CGTTAGTGAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTG                    <  SRR4302532.1253307/94‑1 (MQ=60)
                                                                           CGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTG                    <  SRR4302532.991535/94‑1 (MQ=60)
                                                                            GTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGC                   >  SRR4302532.3588785/1‑94 (MQ=60)
                                                                              TAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGG                 >  SRR4302532.3187041/1‑94 (MQ=60)
                                                                               AGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGG                <  SRR4302532.4747161/94‑1 (MQ=60)
                                                                               AGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGG                >  SRR4302532.2361319/1‑94 (MQ=60)
                                                                                GTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGC               <  SRR4302532.1934215/94‑1 (MQ=60)
                                                                                GTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGC               >  SRR4302532.207872/1‑94 (MQ=60)
                                                                                  CAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAT             <  SRR4302532.4828159/94‑1 (MQ=60)
                                                                                  CAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATAAACGAGTACATACGCCACGTTTTTGCGGGCAT             >  SRR4302532.3441218/1‑94 (MQ=60)
                                                                                   AGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACGCGAGTACATACGCCACGTTTTTGCGGGCATG            <  SRR4302532.4412663/94‑1 (MQ=60)
                                                                                   AGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATG            >  SRR4302532.1569222/1‑94 (MQ=60)
                                                                                   AGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATG            <  SRR4302532.4985018/94‑1 (MQ=60)
                                                                                   AGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATG            <  SRR4302532.3806863/94‑1 (MQ=60)
                                                                                   AGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATG            >  SRR4302532.1073518/1‑94 (MQ=60)
                                                                                     ACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCT          >  SRR4302532.5619246/1‑94 (MQ=60)
                                                                                     ACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCT          <  SRR4302532.4400404/94‑1 (MQ=60)
                                                                                      CGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTT         >  SRR4302532.5808161/1‑94 (MQ=60)
                                                                                        AACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCC       >  SRR4302532.1293332/1‑94 (MQ=60)
                                                                                        AACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCC       <  SRR4302532.4191187/94‑1 (MQ=60)
                                                                                          CACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAG     >  SRR4302532.2784845/1‑94 (MQ=60)
                                                                                          CACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAG     >  SRR4302532.4259200/1‑94 (MQ=60)
                                                                                          CACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAG     >  SRR4302532.1656102/1‑94 (MQ=60)
                                                                                          CACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAG     <  SRR4302532.1536635/94‑1 (MQ=60)
                                                                                          CACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGGATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAG     >  SRR4302532.102229/1‑94 (MQ=60)
                                                                                           ACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGC    >  SRR4302532.5638559/1‑94 (MQ=60)
                                                                                            CAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCG   <  SRR4302532.620115/94‑1 (MQ=60)
                                                                                             AGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGC  <  SRR4302532.3317432/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGC  >  NC_000913/3471937‑3472123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: