Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,472,030 |
G→A |
R54C (CGT→TGT) |
rpsL ← |
30S ribosomal subunit protein S12 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,472,030 | 0 | G | A | 100.0%
| 1276.3
/ NA
| 324 | R54C (CGT→TGT) | rpsL | 30S ribosomal subunit protein S12 |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (162/162); total (162/162) |
Only 100 of 332 total aligned reads displayed.
CACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCA > NC_000913/3471940‑3472119
|
aCGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCa > 1:6015523/1‑93 (MQ=255)
aCGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCa > 1:963709/1‑93 (MQ=255)
atcaggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACt > 1:5206142/1‑93 (MQ=255)
atcaggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACt > 2:5237894/1‑93 (MQ=255)
tcaggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACtt > 1:343084/1‑93 (MQ=255)
caggatcaGGGAGTGCTCCCGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACttt > 1:6442810/1‑93 (MQ=255)
caggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACttt > 2:4873350/1‑93 (MQ=255)
gatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACg > 2:1930172/1‑93 (MQ=255)
atcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGc > 2:538841/1‑93 (MQ=255)
tcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCa < 2:6111666/93‑1 (MQ=255)
tcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCa < 2:5316596/93‑1 (MQ=255)
aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc < 2:645156/93‑1 (MQ=255)
aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc < 1:2794002/93‑1 (MQ=255)
aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc < 2:2100411/93‑1 (MQ=255)
aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc < 1:1525999/93‑1 (MQ=255)
cGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATCCTTTACGCAgcg < 1:1512721/93‑1 (MQ=255)
ggAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgcgc < 1:3941144/93‑1 (MQ=255)
ggAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgcgc > 1:3810054/1‑93 (MQ=255)
gAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGcgcg > 1:2878500/1‑93 (MQ=255)
gAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGcgcg > 1:2972323/1‑93 (MQ=255)
gAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGcgcg < 2:6325498/93‑1 (MQ=255)
aGTGCTCCTGCAGGTTGGGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGCCGAACACAGCCTCCTTTACGCAGCGCgg > 2:4235324/1‑93 (MQ=255)
tGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAg < 1:127632/93‑1 (MQ=255)
gCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGt < 1:5264159/93‑1 (MQ=255)
tCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGttg > 2:6297013/1‑92 (MQ=255)
tCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTc > 2:5820224/1‑93 (MQ=255)
cTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCgg > 2:3286374/1‑93 (MQ=255)
cTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCgg < 2:1426720/93‑1 (MQ=255)
tGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGt > 2:1052924/1‑93 (MQ=255)
tGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGt > 2:3812182/1‑93 (MQ=255)
gCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGtt < 1:4457162/93‑1 (MQ=255)
gCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGtt > 2:6622942/1‑93 (MQ=255)
aGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGtttt > 2:358352/1‑93 (MQ=255)
gTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGtttttt < 2:1605922/93‑1 (MQ=255)
ttGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTa < 1:4094486/93‑1 (MQ=255)
tgtgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAg < 2:5963255/93‑1 (MQ=255)
gtgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAgg < 2:4961243/93‑1 (MQ=255)
tgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGa > 1:772373/1‑93 (MQ=255)
tgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGa < 1:573453/93‑1 (MQ=255)
gACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAg < 2:1193194/93‑1 (MQ=255)
gACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAg < 2:3234537/93‑1 (MQ=255)
aCCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGt < 1:880725/93‑1 (MQ=255)
ccTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTg > 1:385943/1‑93 (MQ=255)
ccTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTg < 1:1935284/93‑1 (MQ=255)
ttCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgt > 2:3682116/1‑93 (MQ=255)
tCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgta < 1:3008245/93‑1 (MQ=255)
tCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgta < 1:72114/93‑1 (MQ=255)
caccacCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtag < 1:4884236/93‑1 (MQ=255)
accaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtagt < 1:1777456/93‑1 (MQ=255)
ccaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtagta < 2:4000256/93‑1 (MQ=255)
ccaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtagta > 2:4720971/1‑93 (MQ=255)
caccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGtat > 1:3470221/1‑93 (MQ=255)
accGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGtata > 1:6226778/1‑93 (MQ=255)
accGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGtata < 1:5556155/93‑1 (MQ=255)
cGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGtatata < 2:702269/93‑1 (MQ=255)
gATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATac < 2:1577473/93‑1 (MQ=255)
gATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATac < 1:4702269/93‑1 (MQ=255)
aTGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATaca < 2:3078479/93‑1 (MQ=255)
tGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATacac > 2:3351673/1‑93 (MQ=255)
tGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATacac < 1:49449/93‑1 (MQ=255)
gAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTa > 2:5732967/1‑93 (MQ=255)
aaGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTAc > 2:3006160/1‑93 (MQ=255)
aaGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTAc < 2:4596006/93‑1 (MQ=255)
aaGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTAc < 1:2382598/93‑1 (MQ=255)
aGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACa > 2:3161475/1‑93 (MQ=255)
aGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACa > 1:3647588/1‑93 (MQ=255)
gTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACAt > 1:5093474/1‑93 (MQ=255)
gTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACAt < 1:2447405/93‑1 (MQ=255)
gTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACAt < 1:3532243/93‑1 (MQ=255)
tCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATa < 2:4512883/93‑1 (MQ=255)
cTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGc > 1:1149909/1‑93 (MQ=255)
ttCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGcc > 1:420212/1‑93 (MQ=255)
tCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCa > 1:6580975/1‑93 (MQ=255)
gAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACg > 1:2684694/1‑93 (MQ=255)
aaaCCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGt > 1:2629561/1‑93 (MQ=255)
aaCCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGtt > 2:4809737/1‑93 (MQ=255)
aCCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGttt > 1:3031779/1‑93 (MQ=255)
aCCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGttt < 2:1661027/93‑1 (MQ=255)
ccGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGtttt < 2:3748643/93‑1 (MQ=255)
cGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTTGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGttttt < 1:6654175/93‑1 (MQ=255)
gTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTg > 1:5505583/1‑93 (MQ=255)
ttAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGc < 1:4846784/93‑1 (MQ=255)
ttAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGc > 1:6421775/1‑93 (MQ=255)
ttAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGc < 2:800948/93‑1 (MQ=255)
tAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCg < 2:6563808/93‑1 (MQ=255)
gTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCggg > 2:1793789/1‑93 (MQ=255)
tCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGc < 1:2535354/93‑1 (MQ=255)
cAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCa < 2:937966/93‑1 (MQ=255)
cAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCa < 1:220729/93‑1 (MQ=255)
cAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCa > 2:2354036/1‑93 (MQ=255)
cAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCa < 2:1261983/93‑1 (MQ=255)
aGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAt > 2:2445074/1‑93 (MQ=255)
aGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAt > 1:4575144/1‑93 (MQ=255)
gACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATg < 1:4065120/93‑1 (MQ=255)
gACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATg > 1:4018012/1‑93 (MQ=255)
gACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTGAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATg > 2:3548567/1‑93 (MQ=255)
cGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCt > 2:5532061/1‑93 (MQ=255)
cGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCt < 2:2779611/93‑1 (MQ=255)
aaCACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTc > 2:5041800/1‑93 (MQ=255)
cacaGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCa > 1:1898080/1‑93 (MQ=255)
|
CACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCA > NC_000913/3471940‑3472119
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGC > NC_000913/3471937‑3472123
|
CGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACA > SRR4302547.1936379/1‑94 (MQ=60)
GCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAG < SRR4302547.2428590/94‑1 (MQ=60)
CCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGC > SRR4302547.3896855/1‑94 (MQ=60)
CCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGC < SRR4302547.2930205/94‑1 (MQ=60)
CACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCA > SRR4302547.982429/1‑94 (MQ=60)
CACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCA < SRR4302547.569202/94‑1 (MQ=60)
CACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCA > SRR4302547.6140373/1‑94 (MQ=60)
CACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCA > SRR4302547.2692013/1‑94 (MQ=60)
ACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCAT < SRR4302547.970465/94‑1 (MQ=60)
CGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATA > SRR4302547.101315/1‑94 (MQ=60)
GGATCAGGATCACGGTGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACATTTAGTCAGACGAACACAGCATAC > SRR4302547.3254882/1‑94 (MQ=60)
GGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATAC > SRR4302547.689432/1‑94 (MQ=60)
GGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATAC > SRR4302547.2763220/1‑94 (MQ=60)
GGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATAC > SRR4302547.534670/1‑94 (MQ=60)
GGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATAC > SRR4302547.6731161/1‑94 (MQ=60)
GGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATAC > SRR4302547.6565405/1‑94 (MQ=60)
GGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATAC > SRR4302547.1954802/1‑94 (MQ=60)
GATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACT < SRR4302547.2599251/94‑1 (MQ=60)
GATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACT > SRR4302547.5313270/1‑94 (MQ=60)
GATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACT < SRR4302547.5360006/94‑1 (MQ=60)
GATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACT > SRR4302547.1985949/1‑94 (MQ=60)
GATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACT < SRR4302547.3555301/94‑1 (MQ=60)
ATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTT > SRR4302547.349461/1‑94 (MQ=60)
ATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTT < SRR4302547.4920160/94‑1 (MQ=60)
TCAGGATCAGGGAGTGCTCCCGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTT > SRR4302547.6577074/1‑94 (MQ=60)
TCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTT < SRR4302547.97991/94‑1 (MQ=60)
CAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTA < SRR4302547.5004081/94‑1 (MQ=60)
CAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTA < SRR4302547.3180140/94‑1 (MQ=60)
AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTAC < SRR4302547.434970/94‑1 (MQ=60)
GATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGC > SRR4302547.721560/1‑94 (MQ=60)
GATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGC > SRR4302547.497272/1‑94 (MQ=60)
TCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAG < SRR4302547.5826990/94‑1 (MQ=60)
ACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCG < SRR4302547.2849942/94‑1 (MQ=60)
ACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCG < SRR4302547.1556369/94‑1 (MQ=60)
CGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATCCTTTACGCAGCGC < SRR4302547.1542866/94‑1 (MQ=60)
CGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGC > SRR4302547.688548/1‑94 (MQ=60)
CGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGC > SRR4302547.3887707/1‑94 (MQ=60)
CGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGC < SRR4302547.5469769/94‑1 (MQ=60)
GGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCG > SRR4302547.2935960/1‑94 (MQ=60)
GGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCG > SRR4302547.6344309/1‑94 (MQ=60)
GGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCG < SRR4302547.4021288/94‑1 (MQ=60)
GGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCG > SRR4302547.3031474/1‑94 (MQ=60)
GGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCG < SRR4302547.511980/94‑1 (MQ=60)
ATTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGG > SRR4302547.5534578/1‑94 (MQ=60)
AGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGA < SRR4302547.1550623/94‑1 (MQ=60)
AGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGA < SRR4302547.3070803/94‑1 (MQ=60)
GTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAG > SRR4302547.751938/1‑94 (MQ=60)
GTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAG > SRR4302547.2287664/1‑94 (MQ=60)
TGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGT < SRR4302547.129937/94‑1 (MQ=60)
GCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTT < SRR4302547.2916908/94‑1 (MQ=60)
GCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTT < SRR4302547.5372563/94‑1 (MQ=60)
GCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTT > SRR4302547.3021074/1‑94 (MQ=60)
GCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTT > SRR4302547.2556769/1‑94 (MQ=60)
CTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTC > SRR4302547.501387/1‑94 (MQ=60)
CTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTC < SRR4302547.1797512/94‑1 (MQ=60)
CTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTC < SRR4302547.3787377/94‑1 (MQ=60)
TCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCG > SRR4302547.5905989/1‑94 (MQ=60)
TCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCG < SRR4302547.2125724/94‑1 (MQ=60)
TCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCG < SRR4302547.3073031/94‑1 (MQ=60)
CCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGG > SRR4302547.4089176/1‑94 (MQ=60)
CCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGG < SRR4302547.1546384/94‑1 (MQ=60)
CCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGG > SRR4302547.3532743/1‑94 (MQ=60)
CTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGT > SRR4302547.1433247/1‑94 (MQ=60)
CTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGT < SRR4302547.917474/94‑1 (MQ=60)
TGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTT > SRR4302547.195249/1‑94 (MQ=60)
GCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTT < SRR4302547.454205/94‑1 (MQ=60)
GCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTT < SRR4302547.4549285/94‑1 (MQ=60)
GCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTT < SRR4302547.6573713/94‑1 (MQ=60)
GCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTT > SRR4302547.1837352/1‑94 (MQ=60)
GCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTT > SRR4302547.2640476/1‑94 (MQ=60)
GCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTT < SRR4302547.2727523/94‑1 (MQ=60)
CAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTT < SRR4302547.4732711/94‑1 (MQ=60)
CAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTT > SRR4302547.853376/1‑94 (MQ=60)
CAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTT < SRR4302547.5217132/94‑1 (MQ=60)
CAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTT < SRR4302547.3811613/94‑1 (MQ=60)
AGGTTGTGACCTTCAGCACCGATGGAGGAAGTAACTTCGAAACCGTTAGGCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTT > SRR4302547.2413598/1‑94 (MQ=60)
AGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTT < SRR4302547.4923522/94‑1 (MQ=60)
TTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAG < SRR4302547.4177748/94‑1 (MQ=60)
GTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGA > SRR4302547.786967/1‑94 (MQ=60)
TGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAG < SRR4302547.1276898/94‑1 (MQ=60)
TGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAG < SRR4302547.583746/94‑1 (MQ=60)
ACCTTCGCCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTG < SRR4302547.6266168/94‑1 (MQ=60)
ACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTG > SRR4302547.393097/1‑94 (MQ=60)
ACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTG < SRR4302547.4471063/94‑1 (MQ=60)
ACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTG < SRR4302547.897650/94‑1 (MQ=60)
CCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGG < SRR4302547.775668/94‑1 (MQ=60)
CCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGG < SRR4302547.6025517/94‑1 (MQ=60)
CCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGG < SRR4302547.1973668/94‑1 (MQ=60)
CTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGT < SRR4302547.5151404/94‑1 (MQ=60)
CTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGT > SRR4302547.3502094/1‑94 (MQ=60)
CTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGCGGT > SRR4302547.655343/1‑94 (MQ=60)
TTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTA > SRR4302547.2982753/1‑94 (MQ=60)
TCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAG < SRR4302547.3061252/94‑1 (MQ=60)
TCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAG < SRR4302547.4184705/94‑1 (MQ=60)
TCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAG < SRR4302547.3068071/94‑1 (MQ=60)
TCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAG < SRR4302547.73466/94‑1 (MQ=60)
TCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAG < SRR4302547.2540118/94‑1 (MQ=60)
CACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGT < SRR4302547.4985420/94‑1 (MQ=60)
CACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGT < SRR4302547.4569347/94‑1 (MQ=60)
CACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGT < SRR4302547.3536793/94‑1 (MQ=60)
ACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTA < SRR4302547.172048/94‑1 (MQ=60)
ACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTA > SRR4302547.409486/1‑94 (MQ=60)
ACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTA < SRR4302547.1812698/94‑1 (MQ=60)
CCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTAT > SRR4302547.3540994/1‑94 (MQ=60)
CCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTAT > SRR4302547.85383/1‑94 (MQ=60)
CCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTAT > SRR4302547.3635419/1‑94 (MQ=60)
CACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATA > SRR4302547.6356102/1‑94 (MQ=60)
ACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATAT < SRR4302547.5670765/94‑1 (MQ=60)
ACCGATGTAGGAAGCCACTTCGAAACCGCTAGTCAGACGAACACAGCATACTTTACGCAACGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATAT > SRR4302547.6740828/1‑94 (MQ=60)
CCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA < SRR4302547.5631237/94‑1 (MQ=60)
CGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATAC < SRR4302547.5203731/94‑1 (MQ=60)
CGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATAC > SRR4302547.4501190/1‑94 (MQ=60)
GATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACA < SRR4302547.4799656/94‑1 (MQ=60)
ATGTAGGAAGTCACTTCGAACCCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACAC > SRR4302547.6626267/1‑94 (MQ=60)
TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACG < SRR4302547.4014872/94‑1 (MQ=60)
TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACG < SRR4302547.50372/94‑1 (MQ=60)
TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACG < SRR4302547.5656026/94‑1 (MQ=60)
GGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTA < SRR4302547.6590043/94‑1 (MQ=60)
GAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTAC < SRR4302547.5912955/94‑1 (MQ=60)
AAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACA < SRR4302547.5495471/94‑1 (MQ=60)
AAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACA > SRR4302547.3721984/1‑94 (MQ=60)
AAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACA < SRR4302547.2430867/94‑1 (MQ=60)
AGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACAT < SRR4302547.2215577/94‑1 (MQ=60)
AGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACAT < SRR4302547.1740835/94‑1 (MQ=60)
AGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACAT > SRR4302547.5198518/1‑94 (MQ=60)
GTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATA < SRR4302547.2496875/94‑1 (MQ=60)
GTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATA < SRR4302547.3604365/94‑1 (MQ=60)
TCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATAC < SRR4302547.5140103/94‑1 (MQ=60)
CACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACG > SRR4302547.4149285/1‑94 (MQ=60)
ACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGC > SRR4302547.1173160/1‑94 (MQ=60)
ACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGC > SRR4302547.4152704/1‑94 (MQ=60)
CTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCC > SRR4302547.428007/1‑94 (MQ=60)
CTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCC < SRR4302547.181300/94‑1 (MQ=60)
TTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCA > SRR4302547.6718015/1‑94 (MQ=60)
CGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACG < SRR4302547.3054035/94‑1 (MQ=60)
CGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACG > SRR4302547.2738590/1‑94 (MQ=60)
CGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACG < SRR4302547.2448263/94‑1 (MQ=60)
GAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGT > SRR4302547.2682523/1‑94 (MQ=60)
AAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTT > SRR4302547.2809816/1‑94 (MQ=60)
AAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTT < SRR4302547.247777/94‑1 (MQ=60)
AACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTT > SRR4302547.3092072/1‑94 (MQ=60)
CGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTTGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTG < SRR4302547.6792993/94‑1 (MQ=60)
CGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTG > SRR4302547.4036524/1‑94 (MQ=60)
CGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTG > SRR4302547.5619252/1‑94 (MQ=60)
CGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTG < SRR4302547.4840603/94‑1 (MQ=60)
GTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGC > SRR4302547.6555643/1‑94 (MQ=60)
TTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCG < SRR4302547.4947228/94‑1 (MQ=60)
AGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGG < SRR4302547.1365544/94‑1 (MQ=60)
AGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGG > SRR4302547.3040578/1‑94 (MQ=60)
GTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGC > SRR4302547.3924056/1‑94 (MQ=60)
TCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCA < SRR4302547.2586586/94‑1 (MQ=60)
CAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAT < SRR4302547.224885/94‑1 (MQ=60)
CAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAT > SRR4302547.6394451/1‑94 (MQ=60)
CAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAT > SRR4302547.4669829/1‑94 (MQ=60)
AGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATG > SRR4302547.4099659/1‑94 (MQ=60)
AGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATG < SRR4302547.4971111/94‑1 (MQ=60)
AGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTATGAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATG < SRR4302547.1256773/94‑1 (MQ=60)
GACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGC > SRR4302547.292861/1‑94 (MQ=60)
GACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGC < SRR4302547.4147686/94‑1 (MQ=60)
GACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGC < SRR4302547.4147685/94‑1 (MQ=60)
ACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCT < SRR4302547.3691709/94‑1 (MQ=60)
CGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTT < SRR4302547.2841408/94‑1 (MQ=60)
GAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTC > SRR4302547.2545144/1‑94 (MQ=60)
GAACACAGCATACTTTACGCAGCGCGGAGTACGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTC < SRR4302547.477418/94‑1 (MQ=60)
AACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCC > SRR4302547.3952590/1‑94 (MQ=60)
AACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCA > SRR4302547.635075/1‑94 (MQ=60)
ACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCA < SRR4302547.4022028/94‑1 (MQ=60)
ACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCA > SRR4302547.1935632/1‑94 (MQ=60)
ACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCA < SRR4302547.3562916/94‑1 (MQ=60)
CACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAG < SRR4302547.3790428/94‑1 (MQ=60)
CACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAG < SRR4302547.4210576/94‑1 (MQ=60)
CAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCG < SRR4302547.2881408/94‑1 (MQ=60)
AGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGC > SRR4302547.310600/1‑94 (MQ=60)
AGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGC > SRR4302547.5917666/1‑94 (MQ=60)
AGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGC > SRR4302547.3112939/1‑94 (MQ=60)
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CGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGC > NC_000913/3471937‑3472123
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
