Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,876,595 |
G→C |
P385A (CCG→GCG) |
gyrB ← |
DNA gyrase subunit B |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,876,595 | 0 | G | C | 100.0%
| 565.9
/ NA
| 159 | P385A (CCG→GCG) | gyrB | DNA gyrase subunit B |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (30/129); total (30/129) |
Only 100 of 215 total aligned reads displayed.
GATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT > NC_000913/3876505‑3876684
|
gATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGcggcgcggcg > 1:3423313/1‑93 (MQ=255)
tCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCt < 1:1171621/93‑1 (MQ=255)
tCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCt < 1:2228802/93‑1 (MQ=255)
gTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGTCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcac < 1:5105227/93‑1 (MQ=255)
gTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcac < 2:3817488/93‑1 (MQ=255)
ttCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacg < 1:3150140/93‑1 (MQ=255)
ttCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacg > 1:3134947/1‑93 (MQ=255)
tCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgg < 2:3079081/93‑1 (MQ=255)
ccTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacggg < 1:924825/93‑1 (MQ=255)
cTGGCAGTCTGCCAGTTTGCCGGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCTCCGCTTcacgggc < 1:2056970/93‑1 (MQ=255)
tGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggca < 2:2272675/93‑1 (MQ=255)
tGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggca < 2:5763737/93‑1 (MQ=255)
gCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggcacg < 1:5583012/93‑1 (MQ=255)
gCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggcacg < 2:3872214/93‑1 (MQ=255)
aggcTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggcacggg < 2:3005074/90‑1 (MQ=255)
tCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCAcgggcacgggca < 2:1022594/93‑1 (MQ=255)
tCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCAcgggcacgggca < 2:5788881/93‑1 (MQ=255)
tCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCacgggcacgggcg > 2:4912104/1‑92 (MQ=255)
tGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCGCCTTTACGGCGGGGGATTTCGCGCGCGCGACGCGCGCCGTCCCGGGCACGGgcagc > 2:4521649/1‑93 (MQ=255)
tGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACCGgccgc > 1:5861295/1‑93 (MQ=255)
ccAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCAt < 2:1954173/93‑1 (MQ=255)
cAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATc < 2:1718159/93‑1 (MQ=255)
cAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATc < 2:4739965/93‑1 (MQ=255)
cAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATc < 1:2856101/93‑1 (MQ=255)
aGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCg < 1:898489/93‑1 (MQ=255)
aGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGGCGCGCCGCCTCACGGGGACGGGGAGCAGCg > 1:4669923/1‑93 (MQ=255)
gTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCCGCATCGa > 2:3052194/1‑93 (MQ=255)
tttGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAt < 2:1900688/93‑1 (MQ=255)
tttGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAt > 2:6081304/1‑93 (MQ=255)
tGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCTCTCGCGTGCCGCGCCGCCTCACGGGCGCGGGCAGCATCggtga > 2:6048585/1‑89 (MQ=255)
tGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATaa < 2:2706185/93‑1 (MQ=255)
gCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑t < 1:4210330/93‑1 (MQ=255)
ccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCCTTTCACCCGCGCGGCGCGCCGCTTCCCCGGCCCGGGCACCATCGATTA‑ttt > 2:1648405/1‑93 (MQ=255)
gCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGGGGCGCGCCGCTTCCCGGGCACGGGGAGCATCGATAA‑TTTTGc > 2:2099500/1‑93 (MQ=255)
gCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCCCCCGCGCGGCGCGCCGCTTCACGGGCCCGGGCACGATCGATAA‑tttttc > 1:1868502/1‑91 (MQ=255)
cAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGcc < 2:592198/93‑1 (MQ=255)
aGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCa < 1:104005/93‑1 (MQ=255)
aGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGGCGCGCCGCTTCACGGGCACGGGCAGCGTCGCTAA‑TTTTGCCa > 2:3690372/1‑93 (MQ=255)
ggCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCaa > 1:3323994/1‑93 (MQ=255)
gCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAAc < 2:656176/93‑1 (MQ=255)
cccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAAcc < 2:4153724/93‑1 (MQ=255)
ccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCa < 1:318083/93‑1 (MQ=255)
ccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCa < 1:4054918/93‑1 (MQ=255)
cGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGGACGGGCAGCATCGATAA‑TTTTGCCAACCAc > 2:5296457/1‑93 (MQ=255)
gCTAAGTCGAGCGCACCTTTACGGCGGGTCCTTTTACGCGCGCGACGCGCCGCTTTACGGGCACGGGGAGCATCGATAATTTTTGCCAAcacg > 1:5655371/1‑90 (MQ=255)
gCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCGACGCGCCGCTTCACGGGCCCGGGCAGCATCGATAA‑TTTTGCCCACCACg > 2:2389958/1‑93 (MQ=255)
gCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCCCCTCCCGGGCACGGGCAGCATCGATAA‑TTTTGCCAAacacc > 2:1429671/1‑92 (MQ=255)
gCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACg > 2:1507515/1‑93 (MQ=255)
cTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTTCGCGGGCGCCGCGCCGCTTCCCGGGCACAGGGCGCATCCATAA‑ATTTGCCAACCACGa > 2:6099913/1‑93 (MQ=255)
cTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGa > 1:5339377/1‑93 (MQ=255)
cTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGa < 2:2867235/93‑1 (MQ=255)
cTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGa < 2:109650/93‑1 (MQ=255)
aaGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGAtt < 1:1342181/93‑1 (MQ=255)
aaGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGAtt < 1:2644800/93‑1 (MQ=255)
aGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGAttt < 2:2280521/93‑1 (MQ=255)
gTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGAtttt < 2:337111/93‑1 (MQ=255)
gAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTcgc < 1:1103240/93‑1 (MQ=255)
cgcACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTc < 1:4104425/93‑1 (MQ=255)
cccTTTACGGCGGGCTATCTCAGGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGt < 1:484628/92‑1 (MQ=255)
ccTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGtt < 2:4441275/93‑1 (MQ=255)
ccTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGtt < 1:1742023/93‑1 (MQ=255)
cTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTg < 2:4059806/93‑1 (MQ=255)
cTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTg < 1:1551900/93‑1 (MQ=255)
tttACGGCGGGTCATTTTACGCGCGCGACGCGCCGCCTCCCGGGGCCGGGCGGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTgg > 2:3969768/1‑93 (MQ=255)
tttACGGCGGGTCATTTCCCGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTgg < 2:4802234/93‑1 (MQ=255)
aCGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGtt < 1:428930/93‑1 (MQ=255)
cggcggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGttt < 2:631383/93‑1 (MQ=255)
cggcggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGttt < 1:2687336/93‑1 (MQ=255)
cggTTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTcc < 2:518501/93‑1 (MQ=255)
cggGTGATTTCCCGCGCGCGGCGCGCCGCTTCACGGTCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTTGGTTTTcc < 1:5270498/93‑1 (MQ=255)
cggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTcc < 1:1980231/93‑1 (MQ=255)
cggGTCATGTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTcc < 1:730038/93‑1 (MQ=255)
gggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCca < 2:3098323/93‑1 (MQ=255)
gggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCca < 1:3439276/93‑1 (MQ=255)
gggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGAATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTGTTCca > 2:5737320/1‑93 (MQ=255)
gTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagc < 1:3034194/93‑1 (MQ=255)
tCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagca < 1:233067/93‑1 (MQ=255)
tCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagca < 2:5241114/93‑1 (MQ=255)
taTTTCCCGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagcag < 2:2231818/92‑1 (MQ=255)
cATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagcag < 2:5620467/93‑1 (MQ=255)
cATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagcag > 2:2468609/1‑93 (MQ=255)
tttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAggg > 2:5496415/1‑92 (MQ=255)
tttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGt > 2:4408664/1‑93 (MQ=255)
tttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGt < 1:6093604/93‑1 (MQ=255)
tttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGt > 2:4552373/1‑93 (MQ=255)
ttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTa < 2:5360067/93‑1 (MQ=255)
cACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAtt < 2:1206512/93‑1 (MQ=255)
ccgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTc < 2:418590/92‑1 (MQ=255)
ccgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTc < 1:5155386/92‑1 (MQ=255)
cgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCt < 1:3649831/93‑1 (MQ=255)
cgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCt > 2:4110996/1‑93 (MQ=255)
gcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCtc > 1:2888911/1‑92 (MQ=255)
gcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGcc > 2:2683390/1‑93 (MQ=255)
gcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGcc > 1:430499/1‑93 (MQ=255)
cgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCca < 1:5060953/93‑1 (MQ=255)
cgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcagc < 1:1244763/93‑1 (MQ=255)
gACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcagca > 2:1114366/1‑93 (MQ=255)
gACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGACAACCACGATTTTCTCGTCGGTTGGGCTTTCCAGCAGGTATTCTGCcagca > 1:844430/1‑93 (MQ=255)
aCGCGCCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcagcag < 2:3322306/93‑1 (MQ=255)
gcgccgCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgtt > 2:4740130/1‑93 (MQ=255)
|
GATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAA‑TTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT > NC_000913/3876505‑3876684
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT > NC_000913/3876504‑3876688
|
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCGGCGCGGCG > SRR4302532.3537994/1‑94 (MQ=60)
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG < SRR4302532.1718596/94‑1 (MQ=60)
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG < SRR4302532.5218546/94‑1 (MQ=60)
GATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCTCGCGCGCGGCGCGCCGC > SRR4302532.2033543/1‑94 (MQ=60)
TCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTT < SRR4302532.2302759/94‑1 (MQ=60)
TCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTT < SRR4302532.1210774/94‑1 (MQ=60)
CGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTC < SRR4302532.721990/94‑1 (MQ=60)
CGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTC < SRR4302532.4321562/94‑1 (MQ=60)
CGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCTTC > SRR4302532.5365497/1‑94 (MQ=60)
GCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCA < SRR4302532.3548151/94‑1 (MQ=60)
GTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGTCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACG < SRR4302532.5280734/94‑1 (MQ=60)
GTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACG > SRR4302532.3239004/1‑94 (MQ=60)
TTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGG < SRR4302532.3254658/94‑1 (MQ=60)
TTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGG < SRR4302532.1626552/94‑1 (MQ=60)
TTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCCCGCGACGCCCCGCTTCACGG > SRR4302532.5484721/1‑94 (MQ=60)
CCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGC < SRR4302532.956520/94‑1 (MQ=60)
CTGGCAGTCTGCCAGTTTGCCGGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCTCCGCTTCACGGGCA < SRR4302532.2125466/94‑1 (MQ=60)
GCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGG < SRR4302532.295657/94‑1 (MQ=60)
GCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGG < SRR4302532.5776823/94‑1 (MQ=60)
CAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACCCGCGCGACGCGCCGCTTtaccgggaccgg > SRR4302532.5015738/1‑82 (MQ=60)
GTCTGCCAGGTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCA < SRR4302532.1307408/94‑1 (MQ=60)
TCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAG < SRR4302532.3449533/94‑1 (MQ=60)
TCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAG < SRR4302532.4235724/94‑1 (MQ=60)
TCTGCCAGTTCGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAG < SRR4302532.1103839/94‑1 (MQ=60)
CTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACCGGCCGC > SRR4302532.6064518/1‑94 (MQ=60)
GCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCAT < SRR4302532.5768319/94‑1 (MQ=60)
CAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCG < SRR4302532.2951603/94‑1 (MQ=60)
CAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTTCGCGCGCGGCGCGGCGCcttccgggcgcggggcggcccc > SRR4302532.4829147/1‑72 (MQ=60)
CAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGGCGCGCCGCCTCACGGGGACGGGGAGCAGCG > SRR4302532.4829148/1‑94 (MQ=60)
AGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTGCTTTCACGCGCGCGGCGCGCCGCTTCCCGGGCACGGGgagccgcga > SRR4302532.880621/1‑85 (MQ=60)
AGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGA < SRR4302532.929131/94‑1 (MQ=60)
TGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAAT < SRR4302532.4099867/94‑1 (MQ=60)
GCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATT < SRR4302532.4351665/94‑1 (MQ=60)
CCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTT < SRR4302532.3372178/94‑1 (MQ=60)
CGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTG < SRR4302532.4614821/94‑1 (MQ=60)
GGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCCCCCGCGCGGCGCGCCGCTTCACGGGCCCGGGCACGATCGATAATTTTTC > SRR4302532.1930391/1‑94 (MQ=60)
AGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAA < SRR4302532.107596/94‑1 (MQ=60)
AGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAA > SRR4302532.3434831/1‑94 (MQ=60)
AGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCCTCACGGGCACGGGCCGCATCGATAATTTTttcaa > SRR4302532.5732845/1‑89 (MQ=60)
GGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCTCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAAC < SRR4302532.2860755/94‑1 (MQ=60)
CCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCTCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCA < SRR4302532.1162180/94‑1 (MQ=60)
CCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCAATTTACCCGCGCGGCGCGCCGCCTCACCGGCACCGGCAGCATCGATAATTTTGCCCACCA > SRR4302532.626542/1‑94 (MQ=53)
CCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCAC < SRR4302532.329116/94‑1 (MQ=60)
CCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCAC < SRR4302532.4191298/94‑1 (MQ=60)
CCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGGCGCGCCGCTTCACGGGCACGGGGAGCATCGATAATTTTTTCAACCAC > SRR4302532.4892797/1‑94 (MQ=60)
CCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCCCCTCACGGGCACGGGCAGCATCGATAATTTTTGCAACCAC > SRR4302532.3044722/1‑94 (MQ=60)
CGCTAAGTCGAGCGCACCTTTACGGCGGGTCCTTTTACGCGCGCGACGCGCCGCTTTACGGGCACGGGGAGCATCGATAATTTTtgccaacacg > SRR4302532.5852291/1‑84 (MQ=60)
CGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACG > SRR4302532.2036764/1‑94 (MQ=60)
GCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCCGCGCGCCGCGTCAAGGGCACCGGCAGCAACGCTAATTTTGCCAACCACGA > SRR4302532.3061575/1‑94 (MQ=53)
GCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGA > SRR4302532.5524579/1‑94 (MQ=60)
TAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATT < SRR4302532.3229461/94‑1 (MQ=60)
AAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTT < SRR4302532.1242285/94‑1 (MQ=60)
AAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTT < SRR4302532.1387059/94‑1 (MQ=60)
AAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTT < SRR4302532.2733488/94‑1 (MQ=60)
AGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTT < SRR4302532.2582043/94‑1 (MQ=60)
GAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCG < SRR4302532.151106/94‑1 (MQ=60)
GAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCG < SRR4302532.1140119/94‑1 (MQ=60)
AGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAAACACGATTTTCGCGT > SRR4302532.3028530/1‑94 (MQ=60)
GCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTTCCAACCACGATTTTTGCGTC > SRR4302532.2307417/1‑94 (MQ=60)
CGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCG < SRR4302532.4242180/94‑1 (MQ=60)
GCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCCTCACGGGCACGGGCAGCATCGATAATTTTTTCAACCACGATTTTtgccgcgg > SRR4302532.5797004/1‑86 (MQ=60)
CACCTTTACGGCGGGGCATTTCACGCGCGCGACGGGCCGCTTCACCGGGACGGGCAGCATCGATAATTTTTGCAACCCCCATTTTCTCGTCGGT > SRR4302532.1551563/1‑94 (MQ=44)
CACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGCATTTCGCGTCGGT > SRR4302532.1901205/1‑94 (MQ=60)
CACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGT > SRR4302532.5882864/1‑94 (MQ=60)
CCCTTTACGGCGGGCTATCTCAGGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTT < SRR4302532.501550/94‑1 (MQ=60)
ACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTT < SRR4302532.781264/94‑1 (MQ=60)
ACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACCGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGGCGGTT > SRR4302532.6076612/1‑94 (MQ=60)
CCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTTCCGTCGGTTG > SRR4302532.588822/1‑94 (MQ=60)
CCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTG < SRR4302532.1800636/94‑1 (MQ=60)
CCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTG < SRR4302532.2771835/94‑1 (MQ=60)
CCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCTCGGGCACGGGGCGCATAGATAATTTTGCCACCCACGCTTTTCGCGTCGGTTG > SRR4302532.4328838/1‑94 (MQ=60)
CCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGGACGGGCAGCATCGATAATTTTGGCCACCACGATTTTCGCGTCGGTTG > SRR4302532.4017619/1‑94 (MQ=60)
CTTTACGGCGTGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGG < SRR4302532.892404/94‑1 (MQ=60)
CTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGG < SRR4302532.5451400/94‑1 (MQ=60)
CTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGG < SRR4302532.1604364/94‑1 (MQ=60)
CTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCCCTTCACCGGCACGGGCAGCATCGATAATTTTTCCAACCAAGATTTTTCCGTCGGTTTG > SRR4302532.5862712/1‑94 (MQ=60)
TTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGG < SRR4302532.3260460/94‑1 (MQ=60)
ACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTT < SRR4302532.443786/94‑1 (MQ=60)
CGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTT < SRR4302532.2777600/94‑1 (MQ=60)
GGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCA < SRR4302532.2117897/94‑1 (MQ=60)
CGGGTGATTTCCCGCGCGCGGCGCGCCGCTTCACGGTCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTTGGTTTTCCA < SRR4302532.5452247/94‑1 (MQ=60)
CGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCA > SRR4302532.6108214/1‑94 (MQ=60)
CGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCA < SRR4302532.2046013/94‑1 (MQ=60)
CGGGTCATGTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCA < SRR4302532.754917/94‑1 (MQ=60)
GGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTTGCTACCACGATTTTCGCGTGGGGTGGGGTTTCTAG > SRR4302532.1370951/1‑94 (MQ=60)
GGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAG < SRR4302532.3554507/94‑1 (MQ=60)
GGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGC > SRR4302532.3243715/1‑94 (MQ=60)
GTCATTTCACGCGCGCGACGCGCCGCTTCGCGGGCACGGGCAGCATCTATAATTTTGCCATCCATGTTTTTCGCGTCGGTTGGGTTTTCCAGCA < SRR4302532.1975751/94‑1 (MQ=60)
GTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCA > SRR4302532.3715613/1‑94 (MQ=60)
GTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCA < SRR4302532.3134311/94‑1 (MQ=60)
TCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAG > SRR4302532.2133428/1‑94 (MQ=60)
TCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAG < SRR4302532.241030/94‑1 (MQ=60)
CATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGG < SRR4302532.578255/94‑1 (MQ=60)
CATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGG < SRR4302532.527205/94‑1 (MQ=60)
ATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGT > SRR4302532.3023339/1‑94 (MQ=60)
TTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTA < SRR4302532.6303948/94‑1 (MQ=60)
TTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTA < SRR4302532.437093/94‑1 (MQ=60)
TTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAT < SRR4302532.943090/94‑1 (MQ=60)
TCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATT < SRR4302532.6054517/94‑1 (MQ=60)
CCGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCT < SRR4302532.5332780/94‑1 (MQ=60)
ACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCT < SRR4302532.2918521/94‑1 (MQ=60)
CGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTG < SRR4302532.3772303/94‑1 (MQ=60)
CGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTG < SRR4302532.6342432/94‑1 (MQ=60)
CGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTC > SRR4302532.2985429/1‑94 (MQ=60)
CGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGTCAACCACGACATTCGAGTCGGTTGGGCGTTCCAGCAGGTATTCTGCC > SRR4302532.3839385/1‑94 (MQ=60)
CGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCC > SRR4302532.445415/1‑94 (MQ=60)
CGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAG < SRR4302532.5234697/94‑1 (MQ=60)
CGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCA < SRR4302532.1286410/94‑1 (MQ=60)
CGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGACAACCACGATTTTCTCGTCGGTTGGGCTTTCCAGCAGGTATTCTGCCAGCA > SRR4302532.873443/1‑94 (MQ=60)
AGACGCGCCGCTTCACGGGCACGGGCCGCATCGCTAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGaattgattctcccacca > SRR4302532.1385999/1‑77 (MQ=60)
GACGCGCGGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAG < SRR4302532.5809321/94‑1 (MQ=60)
CGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT < SRR4302532.4439399/94‑1 (MQ=60)
GCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTC < SRR4302532.3313826/94‑1 (MQ=60)
CGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG > SRR4302532.5054782/1‑94 (MQ=60)
CCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT > SRR4302532.764865/1‑94 (MQ=60)
|
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT > NC_000913/3876504‑3876688
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
