Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,876,595 |
G→C |
P385A (CCG→GCG) |
gyrB ← |
DNA gyrase subunit B |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,876,595 | 0 | G | C | 100.0%
| 609.5
/ NA
| 167 | P385A (CCG→GCG) | gyrB | DNA gyrase subunit B |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (28/139); total (28/139) |
Only 100 of 239 total aligned reads displayed.
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT > NC_000913/3876504‑3876684
|
ggATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTCCCCGCGCGGcgccgc > 2:2173021/1‑93 (MQ=255)
gATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTAAGCGCGGGGCgcggcg > 2:2565656/1‑93 (MQ=255)
aTCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGcgccgc < 1:4909046/93‑1 (MQ=255)
aTCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTTCCCGCGCGGCGcgccgc > 1:5807032/1‑93 (MQ=255)
aTCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGGCGcgccgc > 2:1328830/1‑93 (MQ=255)
tCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCt < 1:809398/93‑1 (MQ=255)
tCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCt < 1:1301217/93‑1 (MQ=255)
gcgTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCCTc > 1:2875059/1‑93 (MQ=255)
cgTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTca < 2:2922503/93‑1 (MQ=255)
cgTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTca < 1:2523010/93‑1 (MQ=255)
ttCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacg < 1:356075/93‑1 (MQ=255)
ttCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGGGTTTTACGCGCGCGGGGCGGCGCtttccg > 2:3715190/1‑89 (MQ=255)
cTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCCCCCGCGCGGCGCGCCGCCTccccggc > 2:2368648/1‑93 (MQ=255)
ggCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTGCTTTCACGCGACCGGCGCGCCTCTTcccgcgccc > 2:3687605/1‑91 (MQ=255)
gCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggcacg < 1:278141/93‑1 (MQ=255)
gCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggcacg < 1:1534432/93‑1 (MQ=255)
cAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggcacgg < 1:1963770/93‑1 (MQ=255)
cAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggcacgg < 1:1491868/93‑1 (MQ=255)
aGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGGCGCGCCGCCTcaccgggccggg > 1:1674420/1‑93 (MQ=255)
gTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCacgggcacgggc < 1:5120911/93‑1 (MQ=255)
gTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCACTTTACGCGCGCGAGGCGGCCCTTTactgggacgggc > 2:1010822/1‑93 (MQ=255)
tGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGgcagc < 2:4695941/93‑1 (MQ=255)
tGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTAAGCGCGCGGCGCGCCGCCTCACGGGGACGGgcagc > 2:3591028/1‑93 (MQ=255)
tGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACCCGCGCGACGCGCCGCTTCACCGGGCCGGgcagc > 2:5208920/1‑93 (MQ=255)
ccAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCAt < 2:1508926/93‑1 (MQ=255)
aGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGGCGCGCCGCCTCACGGGGCCGGGCGGCATCg > 2:1206747/1‑93 (MQ=255)
aGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCg < 2:4835949/93‑1 (MQ=255)
tGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATaa < 2:3297177/93‑1 (MQ=255)
gCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCGTTTCACCCGGGGGGCGCGCCGCTTCTCGGGCAACGGGAGCGTCGAGAAt > 1:1057514/1‑93 (MQ=255)
gCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTCCCGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCCACGCTAAt > 2:5475081/1‑93 (MQ=255)
cccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGGAGCATCGATAAtt > 2:6636872/1‑93 (MQ=255)
cccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAAtt < 2:4344309/93‑1 (MQ=255)
ccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGGCGCGCCGCCTCACGGGGACGGGCAGCATCGATAAttt > 2:5952155/1‑93 (MQ=255)
cGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTGATTTCCCGCGGGCGACGGGCCGCTGCTCCGGCACAGGCAGCCATGAGAAtttt > 2:4802260/1‑93 (MQ=255)
ggCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTg < 1:6615994/93‑1 (MQ=255)
gCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGGCCCGCCGCTTCCCCGGGCCGGGCAGCCACGATAAtttttg > 1:1202901/1‑91 (MQ=255)
cAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGcc < 1:6640077/93‑1 (MQ=255)
aGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTGCTTTCACGCGCGCGACCCCCCGCTTCACGGGGACGGGCAGCATCGATAATTTTTCCa > 2:5033637/1‑93 (MQ=255)
ggCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCaa < 2:2325685/93‑1 (MQ=255)
cccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAAcc < 2:4154547/93‑1 (MQ=255)
cGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGTCAACCAc > 2:932857/1‑93 (MQ=255)
cGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCAc < 1:4181243/93‑1 (MQ=255)
gCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACCCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGTCAACCACg > 2:2039003/1‑93 (MQ=255)
cTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGa < 2:6468053/93‑1 (MQ=255)
cTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGa < 2:4590555/93‑1 (MQ=255)
tAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAt < 1:4422591/93‑1 (MQ=255)
aaGTCGAGCGCACCTTTACTGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAtt > 2:719907/1‑93 (MQ=255)
aaGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGagt > 2:2085911/1‑91 (MQ=255)
aggcGAGCGCACCGTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAttt < 1:6562586/90‑1 (MQ=255)
gTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAtttt < 1:647672/93‑1 (MQ=255)
tCGAGCGCGCCTTTACGGCGAGTCATTTCACGCGCGGGACGCGCCGCTTCACGGTCACGGGCAGCATCGATAATTTTGCCAGCCACGATTTTc < 1:1404462/93‑1 (MQ=255)
tCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTc < 2:3602854/93‑1 (MQ=255)
tCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTc < 1:4582990/93‑1 (MQ=255)
cGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcg < 1:1929392/93‑1 (MQ=255)
gAGCGCACCTTTGCGGCGTGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc < 1:5741411/93‑1 (MQ=255)
gAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGGCGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc > 2:4488404/1‑93 (MQ=255)
gAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc < 2:5292131/93‑1 (MQ=255)
gAGCGCACATTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc < 1:3592734/93‑1 (MQ=255)
cgcACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTc < 2:2260138/93‑1 (MQ=255)
cgcACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTc < 2:3154405/93‑1 (MQ=255)
cACCTTTACGGCGGGTCATTTCACGCGCGCGGCGCGCCGCCTCCCCGGCACGGGCGGCATCGATAAATTTGCCAACCACGACTTTTGcggcgg > 2:3478154/1‑93 (MQ=255)
cccTTTACGGCGGGTCATTTCACGCGCGCGACGCCCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGt < 2:5324188/92‑1 (MQ=255)
ccTTTTCGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCggct > 1:3323024/1‑91 (MQ=255)
ccTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGtt < 2:6344323/93‑1 (MQ=255)
cTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTg < 1:2996226/93‑1 (MQ=255)
cTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTg < 1:3870735/93‑1 (MQ=255)
cTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTg < 2:62693/93‑1 (MQ=255)
tttACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTgg < 1:1119827/93‑1 (MQ=255)
tttACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTgg < 2:5978272/93‑1 (MQ=255)
ttACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTggg < 2:5550890/93‑1 (MQ=255)
ttACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTggg < 1:5313989/93‑1 (MQ=255)
tACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGt < 2:1488043/93‑1 (MQ=255)
aCGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGtt < 2:1541699/93‑1 (MQ=255)
cggcggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGttt < 1:5402787/93‑1 (MQ=255)
gcggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTc < 1:3096857/93‑1 (MQ=255)
cggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTcc < 2:2106172/93‑1 (MQ=255)
cggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTcc < 2:5082184/93‑1 (MQ=255)
ggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTTcag > 1:3946256/1‑93 (MQ=255)
ggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcag < 1:3268422/93‑1 (MQ=255)
gTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagc < 2:4037479/93‑1 (MQ=255)
cATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagcag < 1:6287699/93‑1 (MQ=255)
tttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGt < 2:2393791/93‑1 (MQ=255)
tttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGt > 2:3005439/1‑93 (MQ=255)
ttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTa < 2:1090474/93‑1 (MQ=255)
tCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAt < 1:2083986/93‑1 (MQ=255)
tCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAt < 2:269625/93‑1 (MQ=255)
tCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAt < 2:1870829/93‑1 (MQ=255)
ccgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTc < 1:6166295/92‑1 (MQ=255)
cgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCt < 2:2749392/93‑1 (MQ=255)
cgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCt > 1:3016292/1‑93 (MQ=255)
cgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTAGCGTCGGTTGGGTTTTCCAGCAGGTATTCt > 1:2187765/1‑93 (MQ=255)
gcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTgac > 2:5141558/1‑91 (MQ=255)
gcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGcc < 1:4032659/93‑1 (MQ=255)
gcggcgCGCCGCTTCACGGACACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcag < 2:878692/93‑1 (MQ=255)
gcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcag < 2:2195078/93‑1 (MQ=255)
caaCGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcagc < 1:5975246/91‑1 (MQ=255)
aCGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcagcag > 2:4143515/1‑93 (MQ=255)
aCGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcagcag > 2:1188639/1‑93 (MQ=255)
gcgccgCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgtt < 1:1807339/93‑1 (MQ=255)
gcgccgCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgtt < 2:1365795/93‑1 (MQ=255)
|
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT > NC_000913/3876504‑3876684
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT > NC_000913/3876504‑3876688
|
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG < SRR4302547.6762823/94‑1 (MQ=60)
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGGATTTTACGCGCGCGGCGCGCCG > SRR4302547.3635302/1‑94 (MQ=60)
ATCGCGTTCCTGGCAGTGTGCGAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTGCGGCGGGTCATTTCACGCGCCCGAAGCGCCGCT < SRR4302547.6254912/94‑1 (MQ=60)
ATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCT < SRR4302547.5010709/94‑1 (MQ=60)
TCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTT < SRR4302547.824734/94‑1 (MQ=60)
TCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTT < SRR4302547.1327397/94‑1 (MQ=60)
TCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCGT > SRR4302547.4947519/1‑94 (MQ=60)
CGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCCTC > SRR4302547.2932454/1‑94 (MQ=60)
GCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCA < SRR4302547.6627600/94‑1 (MQ=60)
CGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCAC < SRR4302547.2573993/94‑1 (MQ=60)
CGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCAC < SRR4302547.4243849/94‑1 (MQ=60)
GTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACG < SRR4302547.1146358/94‑1 (MQ=60)
TTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGG < SRR4302547.362679/94‑1 (MQ=60)
CCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGC < SRR4302547.6719136/94‑1 (MQ=60)
CCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACCCGCGCGGCGCGGCGCctccccggg > SRR4302547.4993889/1‑85 (MQ=60)
CTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGGCGCTTCACCGGCA > SRR4302547.2162289/1‑94 (MQ=60)
GCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGG < SRR4302547.1564972/94‑1 (MQ=60)
GCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGG < SRR4302547.283328/94‑1 (MQ=60)
CAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGG < SRR4302547.1521626/94‑1 (MQ=60)
CAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGG < SRR4302547.2002758/94‑1 (MQ=60)
AGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGC < SRR4302547.3723692/94‑1 (MQ=60)
AGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGTCTTTCAAGCGCGCGGCGGGGCGCTTTACGGGCCCGGGC > SRR4302547.2999751/1‑94 (MQ=60)
AGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCCTCACGGGCACGGGC > SRR4302547.6781893/1‑94 (MQ=60)
GTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCA < SRR4302547.5226424/94‑1 (MQ=60)
CCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATC < SRR4302547.6328039/94‑1 (MQ=60)
CCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATC < SRR4302547.2411279/94‑1 (MQ=60)
CCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATC < SRR4302547.3986656/94‑1 (MQ=60)
CAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCCTCACCGGGACGGGCCGCATCG > SRR4302547.1086527/1‑94 (MQ=60)
AGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCGACGCGCCGCCTCACCGGCACCGGGAGCCTCGA > SRR4302547.675318/1‑94 (MQ=60)
AGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCACCGA > SRR4302547.1364563/1‑94 (MQ=60)
GTTTGCCCGGCAGCCCCGCAAATCCGAGCGCACCTTTCCGGCGGGTCTTTTCACGCGCGCGCCGCCCCGC‑TCACGGGCACGGGCAGCATCGATA < SRR4302547.2684035/94‑1 (MQ=37)
TTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTGTACGGCGGCTCATTTCACGCGCGCTACGCGCCGCTTCACGGGCACGGGCAGCATCGATA < SRR4302547.2837501/94‑1 (MQ=60)
TTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA < SRR4302547.6268224/94‑1 (MQ=60)
TGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAAT < SRR4302547.976396/94‑1 (MQ=60)
TGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAAT < SRR4302547.1309247/94‑1 (MQ=60)
GCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTTACGCGCGCGGCGCGCCGCCTCACGGGCACGGGCAGCATCCATAAAT > SRR4302547.2474225/1‑94 (MQ=60)
CCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCTTCACCGGCACGGGCAGCATCGATAATTT > SRR4302547.1964341/1‑94 (MQ=60)
CGGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTT < SRR4302547.5224602/94‑1 (MQ=60)
CCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTT < SRR4302547.2798659/94‑1 (MQ=60)
CGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTG < SRR4302547.5432997/94‑1 (MQ=60)
GGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGC < SRR4302547.6753705/94‑1 (MQ=60)
CAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCA < SRR4302547.6778282/94‑1 (MQ=60)
CCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGGGGCGCCGCTTCACCGGCACGGGGAGCATCGATAATTTTGgcacaca > SRR4302547.1750874/1‑87 (MQ=60)
CCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGGCGCGCCGCTTCACGGGGACCGGCAGGATCGATgaattttccaaaca > SRR4302547.5902745/1‑80 (MQ=51)
CCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCTTCACGGGGACGGGGAGCATCGATAATTTTGCCAACCA > SRR4302547.3344864/1‑94 (MQ=60)
CCCGCTAAGGCGAGCGGACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCA < SRR4302547.3990937/94‑1 (MQ=60)
CCGCTAAGTCGAGCGCACCTTTACGGCGGGTCCTTTTACGCGCGCGACGCGCCGCTTCCCCGGCACGGGCAGCATCGATAATTTTTCCAACCAC > SRR4302547.6074882/1‑94 (MQ=60)
CGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACG < SRR4302547.4266454/94‑1 (MQ=60)
GCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGA < SRR4302547.4044106/94‑1 (MQ=60)
GCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCCCGCGACGCGGCGCTTCACCGGGACGGGCAGCATCGATAATTTTTTCCACCACGA > SRR4302547.3808290/1‑94 (MQ=60)
CTAAGTCGAGCGCTCCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAT < SRR4302547.3482619/94‑1 (MQ=60)
CTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCGGCGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACCAT > SRR4302547.1096637/1‑94 (MQ=60)
CTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAT < SRR4302547.3071524/94‑1 (MQ=60)
TAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATT < SRR4302547.4513947/94‑1 (MQ=60)
TAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTTCCAAACACGACT > SRR4302547.333264/1‑94 (MQ=60)
AAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTT < SRR4302547.1783089/94‑1 (MQ=60)
AAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGACTT < SRR4302547.3535507/94‑1 (MQ=60)
AGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGGAGCATCGATAATTTTGCCAACCCCGATTTT > SRR4302547.6763504/1‑94 (MQ=60)
AGGCGAGCGCACCGTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTT < SRR4302547.6699240/94‑1 (MQ=60)
GTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTC < SRR4302547.659607/94‑1 (MQ=60)
TCGAGCGCGCCTTTACGGCGAGTCATTTCACGCGCGGGACGCGCCGCTTCACGGTCACGGGCAGCATCGATAATTTTGCCAGCCACGATTTTCG < SRR4302547.1432556/94‑1 (MQ=60)
TCGAGCGCACCTTTTCGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCG < SRR4302547.755573/94‑1 (MQ=60)
TCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCG < SRR4302547.4677838/94‑1 (MQ=60)
CGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGC < SRR4302547.1967637/94‑1 (MQ=60)
GAGCGCACCTTTGCGGCGTGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCG < SRR4302547.5860058/94‑1 (MQ=60)
GAGCGCACCTTTACGGCGGGTCACTTTACGCGCGCGACGCGCCGCTTCACGGGGACGGGCAGgatagataaaattttcaaccaatagttttgcg > SRR4302547.4336040/1‑62 (MQ=56)
GAGCGCACCTTTACGGCGGGGCATTTCCCGCGCGCGACGCGCCCCTTCACGGGCACGGGCAGCATCGATAATTTTTCCAACCACGATTTTtgcc > SRR4302547.5268294/1‑90 (MQ=60)
GAGCGCACATTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCG < SRR4302547.3666015/94‑1 (MQ=60)
CGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGgatcggaaaatttggcaaccacggatttttcggcg > SRR4302547.3456367/1‑59 (MQ=60)
CACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTTGCGTCGGG > SRR4302547.3443571/1‑94 (MQ=60)
ACCTTTTCGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGCT > SRR4302547.3390151/1‑94 (MQ=60)
CCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTG < SRR4302547.3122044/94‑1 (MQ=60)
CTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGG < SRR4302547.3055834/94‑1 (MQ=60)
CTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGG < SRR4302547.3949524/94‑1 (MQ=60)
TTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGG < SRR4302547.1142403/94‑1 (MQ=60)
TTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGT < SRR4302547.5423578/94‑1 (MQ=60)
TTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCCTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACCATTTTCGCGTCGGTTGGGT > SRR4302547.5615198/1‑94 (MQ=60)
ACGGCGGGTCTTTTCACGCGCGCGCCGAGCCGCTTCACCGGCACGGGCAGCATCGATAATTTTGACAACCACCCTTTTCGCGTCGGTTGGGTTT > SRR4302547.1028521/1‑94 (MQ=60)
ACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTT < SRR4302547.144825/94‑1 (MQ=60)
ACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTT < SRR4302547.2001331/94‑1 (MQ=60)
CGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTTGGTTTT > SRR4302547.5903139/1‑94 (MQ=60)
CGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTT < SRR4302547.5514462/94‑1 (MQ=60)
GCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCC < SRR4302547.3158220/94‑1 (MQ=60)
CGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCA > SRR4302547.5393463/1‑94 (MQ=60)
CGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCA > SRR4302547.5633294/1‑94 (MQ=60)
GGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTTCAG > SRR4302547.4026512/1‑94 (MQ=60)
GGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGC < SRR4302547.3333823/94‑1 (MQ=60)
GTCATTTCACGCGCGCGACGCCCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCA < SRR4302547.1524846/94‑1 (MQ=60)
GTCATTCCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCA < SRR4302547.1678417/94‑1 (MQ=60)
CATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGG < SRR4302547.6418354/94‑1 (MQ=60)
CATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGG > SRR4302547.5908841/1‑94 (MQ=60)
ATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGT < SRR4302547.623850/94‑1 (MQ=60)
TTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTT > SRR4302547.1525943/1‑94 (MQ=60)
TTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAT < SRR4302547.4873286/94‑1 (MQ=60)
TCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATT < SRR4302547.2894139/94‑1 (MQ=60)
TCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATT > SRR4302547.5315072/1‑94 (MQ=60)
TCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATT < SRR4302547.2125539/94‑1 (MQ=60)
CCGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCT < SRR4302547.6294281/94‑1 (MQ=60)
ACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCT > SRR4302547.3076273/1‑94 (MQ=60)
ACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTAGCGTCGGTTGGGTTTTCCAGCAGGTATTCT > SRR4302547.2231642/1‑94 (MQ=60)
GCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGC > SRR4302547.2012171/1‑94 (MQ=60)
GCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGC > SRR4302547.1307798/1‑94 (MQ=60)
CGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCC < SRR4302547.2023723/94‑1 (MQ=60)
GCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCA < SRR4302547.4114552/94‑1 (MQ=60)
CGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCA > SRR4302547.6676676/1‑94 (MQ=60)
CGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCA > SRR4302547.31088/1‑94 (MQ=60)
CAACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCA < SRR4302547.6099184/94‑1 (MQ=60)
GACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAG < SRR4302547.3239679/94‑1 (MQ=60)
ACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGT < SRR4302547.3029011/94‑1 (MQ=60)
CGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT < SRR4302547.439818/94‑1 (MQ=60)
GCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTC < SRR4302547.1843057/94‑1 (MQ=60)
GCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTC < SRR4302547.4656822/94‑1 (MQ=60)
CGCCGCTTCCCGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG > SRR4302547.6613988/1‑94 (MQ=60)
CGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG > SRR4302547.1893484/1‑94 (MQ=60)
CGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG < SRR4302547.713427/94‑1 (MQ=60)
CGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG < SRR4302547.2542059/94‑1 (MQ=60)
CCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCAAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT < SRR4302547.716968/94‑1 (MQ=60)
|
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT > NC_000913/3876504‑3876688
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
