Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,975,313 |
Δ1 bp |
intergenic (+173/‑901) |
wzxE → / → wecF |
putative cytochrome/TDP‑Fuc4NAc:lipidII transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,975,310 | 0 | C | . | 97.3%
| 1006.5
/ 20.2
| 226 | intergenic (+170/‑904) | wzxE/wecF | putative cytochrome/TDP‑Fuc4NAc:lipidII transferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (100/119); minor base T (2/4); total (102/124) |
| Fisher's exact test for biased strand distribution p-value = 6.92e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.79e-01 |
Only 100 of 251 total aligned reads displayed.
GCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC > NC_000913/3975218‑3975399
|
gcgACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccct < 1:1628624/93‑2 (MQ=255)
gcgACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccct > 2:5357484/1‑92 (MQ=255)
gacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctgg < 2:4986354/93‑4 (MQ=255)
acgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctggg > 2:2585484/1‑89 (MQ=255)
acgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctggg > 1:92264/1‑89 (MQ=255)
gagcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaa > 2:5995728/1‑93 (MQ=255)
gagcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaa > 2:2977761/1‑93 (MQ=255)
gagcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaa > 2:1216585/1‑93 (MQ=255)
agcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaaa < 2:1968407/93‑1 (MQ=255)
agcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaaa > 1:4219806/1‑93 (MQ=255)
cgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaaaaa > 2:4846708/1‑93 (MQ=255)
gagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaaaaaa < 1:4278673/93‑1 (MQ=255)
cACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAAtag > 1:1945925/1‑91 (MQ=255)
cACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCg < 2:5056046/93‑1 (MQ=255)
aCGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGc > 1:5304560/1‑93 (MQ=255)
cgcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCt < 1:5636223/93‑1 (MQ=255)
cgcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCt > 2:3195075/1‑93 (MQ=255)
gcgggAGTTTATGGTTGTTGGCATGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAACTCGCTGGc < 1:4301350/93‑1 (MQ=255)
gcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGc > 2:1705320/1‑93 (MQ=255)
gcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGc < 2:279139/93‑1 (MQ=255)
gcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGc < 2:4219806/93‑1 (MQ=255)
gcgcgAGTGTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGc < 1:105477/93‑1 (MQ=255)
gcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCgg > 2:3577116/1‑93 (MQ=255)
gAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGaa > 2:5538939/1‑93 (MQ=255)
gAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGaa < 2:3613317/93‑1 (MQ=255)
gTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGc > 1:6142471/1‑93 (MQ=255)
ttATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCgg < 1:1832099/93‑1 (MQ=255)
tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGt < 1:1209790/93‑1 (MQ=255)
tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGt < 1:549154/93‑1 (MQ=255)
tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGt > 2:3941644/1‑93 (MQ=255)
aTGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTc < 2:365726/93‑1 (MQ=255)
gttgttGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATc > 1:521755/1‑93 (MQ=255)
ttgttgGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATcg < 1:5048420/93‑1 (MQ=255)
ggCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGaaa < 2:4446591/93‑1 (MQ=255)
ggCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGaaa < 2:27678/93‑1 (MQ=255)
gCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAg > 2:1653651/1‑93 (MQ=255)
cAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGc < 1:2067073/93‑1 (MQ=255)
aaGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGACAGCa > 2:5797159/1‑93 (MQ=255)
aaGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTAATCGCGAAAGCa > 1:2876208/1‑93 (MQ=255)
aGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCaa > 1:1417014/1‑93 (MQ=255)
ggACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCaaa < 1:1765401/93‑1 (MQ=255)
gacgacGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCaaaa < 2:2353731/93‑1 (MQ=255)
acgacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAg < 1:151379/93‑1 (MQ=255)
gacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCt < 1:3090162/93‑1 (MQ=255)
gacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCt < 2:2514438/93‑1 (MQ=255)
gacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCt > 2:4693805/1‑93 (MQ=255)
gacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCt > 1:4863466/1‑93 (MQ=255)
cgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTaa < 1:6009286/93‑1 (MQ=255)
cgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTaa < 2:6058774/93‑1 (MQ=255)
ggCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAc > 2:5332217/1‑93 (MQ=255)
ggCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAc < 2:660181/93‑1 (MQ=255)
ggCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGGCATCGCGAAAGCAAAAGCTAAc > 1:2119589/1‑93 (MQ=255)
gCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCCATTTTT‑CCCTGGGCAAAAATATCTGGCGGAAGCGGTCATCGCGAACGCAAAAGCTacac > 2:3891606/1‑90 (MQ=255)
gCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAcc < 2:3542088/93‑1 (MQ=255)
gCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAcc > 2:1858623/1‑93 (MQ=255)
cTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCg > 2:5729265/1‑93 (MQ=255)
atAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGAAAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGt < 1:3787444/92‑1 (MQ=255)
aaGTGATACCTGTCGAGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTca < 1:2511483/93‑1 (MQ=255)
aGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcag > 2:2518310/1‑93 (MQ=255)
gTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagc < 1:2927396/93‑1 (MQ=255)
gTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagc < 1:3106371/93‑1 (MQ=255)
tGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagca > 2:4047738/1‑93 (MQ=255)
gATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagcag > 1:5673974/1‑93 (MQ=255)
aTAGTTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCagcagc < 2:7224/93‑1 (MQ=255)
aTAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCagcagc < 1:5823069/93‑1 (MQ=255)
aTAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCagcagc > 1:3406798/1‑93 (MQ=255)
aTAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCagcagc < 1:3649685/93‑1 (MQ=255)
tAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCg < 2:2254035/93‑1 (MQ=255)
gCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGtt > 1:3266328/1‑93 (MQ=255)
cTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGttt < 1:1903263/93‑1 (MQ=255)
tGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGtttt < 1:3315922/93‑1 (MQ=255)
ccGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttc > 1:5422371/1‑93 (MQ=255)
ccGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttc < 2:5233230/93‑1 (MQ=255)
ggCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTc > 2:5281251/1‑52 (MQ=39)
ggCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTc < 1:5281251/52‑1 (MQ=255)
ggCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttctt < 1:5963585/93‑1 (MQ=255)
gcgcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttcttc < 2:4350892/93‑1 (MQ=255)
cgcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTcc < 1:5792172/93‑1 (MQ=255)
cgcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTcc < 1:3193058/93‑1 (MQ=255)
gcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCa > 1:3591855/1‑93 (MQ=255)
gcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCa < 2:1058131/93‑1 (MQ=255)
gcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCa < 1:4643880/93‑1 (MQ=255)
gcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCa < 2:4548495/93‑1 (MQ=255)
cTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAc > 2:2630703/1‑93 (MQ=255)
tttCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACg > 2:96748/1‑93 (MQ=255)
tttCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACg > 1:4062916/1‑93 (MQ=255)
tttCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACg > 1:2331752/1‑93 (MQ=255)
tttCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACg > 1:1688590/1‑93 (MQ=255)
ttCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACgg > 1:5179631/1‑93 (MQ=255)
tgtgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCa > 2:3811336/1‑93 (MQ=255)
tgtgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCa < 2:1298785/93‑1 (MQ=255)
gtgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGTGTTTTTTCTTCCACGGTCAg > 1:2714366/1‑93 (MQ=255)
gtgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAg < 1:395592/93‑1 (MQ=255)
gtgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTATTCCACGGTCAg < 1:654652/93‑1 (MQ=255)
tgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGt > 2:4408474/1‑93 (MQ=255)
aaTTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCa > 2:3446075/1‑93 (MQ=255)
attttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCaa < 1:4606064/92‑1 (MQ=255)
ttttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAt < 2:5566688/93‑1 (MQ=255)
ttttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAt < 1:2304615/93‑1 (MQ=255)
ttttCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATc < 1:691842/93‑1 (MQ=255)
|
GCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC > NC_000913/3975218‑3975399
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACT > NC_000913/3975220‑3975406
|
CGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCT < SRR4302532.5998481/94‑1 (MQ=60)
CGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCT < SRR4302532.1317147/94‑1 (MQ=60)
CGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCT < SRR4302532.5296774/94‑1 (MQ=60)
CGACGAGCGAGCAAGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGG < SRR4302532.6175290/94‑1 (MQ=60)
GACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGG > SRR4302532.95481/1‑94 (MQ=60)
GACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGG < SRR4302532.2021498/94‑1 (MQ=60)
ACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGA < SRR4302532.1824193/94‑1 (MQ=60)
CGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAA < SRR4302532.5054433/94‑1 (MQ=60)
GAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAA > SRR4302532.288815/1‑94 (MQ=60)
GAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAA > SRR4302532.4361443/1‑94 (MQ=60)
GAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAA > SRR4302532.4071681/1‑94 (MQ=60)
GAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAA > SRR4302532.1959336/1‑94 (MQ=60)
CGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAA > SRR4302532.2445474/1‑94 (MQ=60)
CGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTATGCAATTTTT‑CCCTGGGAAAAAA > SRR4302532.3610692/1‑94 (MQ=60)
GAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAAT < SRR4302532.4422765/94‑1 (MQ=60)
AGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATC > SRR4302532.708043/1‑94 (MQ=60)
GCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCG > SRR4302532.2010624/1‑94 (MQ=60)
GCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATAG > SRR4302532.2010625/1‑94 (MQ=60)
CACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGC > SRR4302532.5487926/1‑94 (MQ=60)
ACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAttgcac < SRR4302532.4361728/94‑7 (MQ=60)
CGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTG < SRR4302532.3376644/94‑1 (MQ=60)
CGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTG < SRR4302532.5832009/94‑1 (MQ=60)
CGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTG < SRR4302532.2397329/94‑1 (MQ=60)
GCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGG < SRR4302532.329784/94‑1 (MQ=60)
GCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGG < SRR4302532.5485595/94‑1 (MQ=60)
GCGGGAGTTTATGGTTGTTGGCATGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAACTCGCTGGCG < SRR4302532.4446730/94‑1 (MQ=60)
GCGCGAGTTTATGGTTGTTGGCAGGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCG < SRR4302532.4446729/94‑1 (MQ=60)
GCGCGAGTGTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCG < SRR4302532.109119/94‑1 (MQ=60)
CGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAA > SRR4302532.3733689/1‑94 (MQ=60)
GAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGGAG > SRR4302532.2558061/1‑94 (MQ=60)
GAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAG < SRR4302532.5855520/94‑1 (MQ=60)
AGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGGAAAAATCGCTGGCGGAAGG > SRR4302532.1284993/1‑94 (MQ=60)
AGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGC < SRR4302532.1002410/94‑1 (MQ=60)
AGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGC > SRR4302532.6354349/1‑94 (MQ=60)
GTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCG < SRR4302532.4876805/94‑1 (MQ=60)
GTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCG > SRR4302532.1758361/1‑94 (MQ=60)
TTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGT > SRR4302532.5976311/1‑94 (MQ=60)
TTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGT < SRR4302532.5769854/94‑1 (MQ=60)
TTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGT < SRR4302532.1893042/94‑1 (MQ=60)
TATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTC < SRR4302532.1250264/94‑1 (MQ=60)
TATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTC < SRR4302532.568313/94‑1 (MQ=60)
acactctttccctacacgacgctcttccgatcttgggaTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCA < SRR4302532.5463399/56‑1 (MQ=60)
TGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCAT < SRR4302532.6341314/94‑1 (MQ=60)
TGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCAT > SRR4302532.5364049/1‑94 (MQ=60)
GGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATC > SRR4302532.539977/1‑94 (MQ=60)
GGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATC > SRR4302532.3176280/1‑94 (MQ=60)
GGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGCAACCGGACATC > SRR4302532.5418472/1‑94 (MQ=60)
GGTTGTTGGAAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGCAGCGGTCATC > SRR4302532.2360144/1‑94 (MQ=60)
GTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCG < SRR4302532.4938481/94‑1 (MQ=60)
TTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGC < SRR4302532.5221637/94‑1 (MQ=60)
TGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCG < SRR4302532.3414697/94‑1 (MQ=60)
TGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAA < SRR4302532.5418799/94‑1 (MQ=60)
TGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAA < SRR4302532.1927014/94‑1 (MQ=60)
CAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCA < SRR4302532.2135951/94‑1 (MQ=60)
CAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCA > SRR4302532.5692941/1‑94 (MQ=60)
CAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTAATCGCGAAAGCA > SRR4302532.2972385/1‑94 (MQ=60)
AAGGACGACGGCTTAAGTGATATCTGTCCCGCGCTTTCTGTGCAATTTTT‑CCCTGGGGAAAAATCGCTGGCGGAAGCGGTCATTGCGAAAGCAA > SRR4302532.2629659/1‑94 (MQ=60)
AAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAA > SRR4302532.1464561/1‑94 (MQ=60)
AAGGACGACGGCTTAAGTGATAGATGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGATGGCGGAAGCGGACATCGCTAAAGCAA > SRR4302532.1889113/1‑94 (MQ=60)
AGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAA > SRR4302532.4355407/1‑94 (MQ=60)
GGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAA < SRR4302532.1824571/94‑1 (MQ=60)
ACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGC < SRR4302532.156446/94‑1 (MQ=60)
CGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCT > SRR4302532.2674621/1‑94 (MQ=60)
CGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCT > SRR4302532.5030762/1‑94 (MQ=60)
GACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTA < SRR4302532.3192548/94‑1 (MQ=60)
CGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAC < SRR4302532.6216806/94‑1 (MQ=60)
CGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGGCATCGCGAAAGCAAAAGCTAAC > SRR4302532.2190399/1‑94 (MQ=60)
GGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACC > SRR4302532.741402/1‑94 (MQ=60)
GGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACC < SRR4302532.4174956/94‑1 (MQ=60)
CTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGT > SRR4302532.6292075/1‑94 (MQ=60)
TTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTC < SRR4302532.4719722/94‑1 (MQ=60)
ATAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGAAAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTC < SRR4302532.3915211/94‑1 (MQ=60)
AAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAG > SRR4302532.5301644/1‑94 (MQ=60)
AAGTGATACCTGTCGAGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAG < SRR4302532.2595277/94‑1 (MQ=60)
GTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCA < SRR4302532.3209398/94‑1 (MQ=60)
GTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCA < SRR4302532.3024786/94‑1 (MQ=60)
TGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAG > SRR4302532.5871948/1‑94 (MQ=60)
TGATAGCTGTCCGGCGCTGTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAG < SRR4302532.6162688/94‑1 (MQ=60)
GATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGC > SRR4302532.3520874/1‑94 (MQ=60)
GATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGC < SRR4302532.3268506/94‑1 (MQ=60)
ATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCG < SRR4302532.3772150/94‑1 (MQ=60)
ATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCG < SRR4302532.6025279/94‑1 (MQ=60)
ATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCG < SRR4302532.3807534/94‑1 (MQ=60)
AGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTT < SRR4302532.2187309/94‑1 (MQ=60)
AGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTT > SRR4302532.3374965/1‑94 (MQ=60)
GCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTT < SRR4302532.3002234/94‑1 (MQ=60)
GCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTT < SRR4302532.5974861/94‑1 (MQ=60)
GCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTT < SRR4302532.4789631/94‑1 (MQ=60)
GCTGTCCGGCGCTTTCTGTGCAACTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTT < SRR4302532.3619374/94‑1 (MQ=60)
CTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTT > SRR4302532.1667057/1‑94 (MQ=60)
CTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTT < SRR4302532.1966384/94‑1 (MQ=60)
CTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTT < SRR4302532.3437406/94‑1 (MQ=60)
TGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTT < SRR4302532.3426490/94‑1 (MQ=60)
TCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTC > SRR4302532.5610311/1‑94 (MQ=60)
TCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTC < SRR4302532.3311216/94‑1 (MQ=60)
GGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTC < SRR4302532.6169798/94‑1 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA > SRR4302532.3711981/1‑94 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA > SRR4302532.3791395/1‑94 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA < SRR4302532.3299088/94‑1 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA > SRR4302532.4144490/1‑94 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA > SRR4302532.1247936/1‑94 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA < SRR4302532.5993536/94‑1 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA > SRR4302532.4366295/1‑94 (MQ=60)
GCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAC < SRR4302532.4802200/94‑1 (MQ=60)
GCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAC < SRR4302532.321187/94‑1 (MQ=60)
GCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAC > SRR4302532.3084412/1‑94 (MQ=60)
GCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAC > SRR4302532.897410/1‑94 (MQ=60)
CTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACG > SRR4302532.1745618/1‑94 (MQ=60)
CTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACG < SRR4302532.5593879/94‑1 (MQ=60)
CTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACG > SRR4302532.552268/1‑94 (MQ=60)
CTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACG < SRR4302532.1594512/94‑1 (MQ=60)
CTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACG > SRR4302532.2409425/1‑94 (MQ=60)
CTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACG > SRR4302532.1702084/1‑94 (MQ=60)
CTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACG > SRR4302532.4199454/1‑94 (MQ=60)
CTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGATTTTTCTTCCACG > SRR4302532.2296585/1‑94 (MQ=60)
TTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGG > SRR4302532.1481336/1‑94 (MQ=60)
TTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGG > SRR4302532.5358022/1‑94 (MQ=60)
TTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGT > SRR4302532.4572711/1‑94 (MQ=60)
TTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGT < SRR4302532.1884132/94‑1 (MQ=60)
CTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCA < SRR4302532.5611074/94‑1 (MQ=60)
CTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCA < SRR4302532.6357454/94‑1 (MQ=60)
CTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCA > SRR4302532.2947037/1‑94 (MQ=60)
TGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGTGTTTTTTCTTCCACGGTCAG > SRR4302532.2805665/1‑94 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCTTCACCAGCGTTTTTTATTCCACGGTCAGT > SRR4302532.6033892/1‑94 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGT < SRR4302532.409436/94‑1 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGT > SRR4302532.2012353/1‑94 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTATTCCACGGTCAGT < SRR4302532.677345/94‑1 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTATTCCACGGTCAGT < SRR4302532.677550/94‑1 (MQ=60)
ATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAT > SRR4302532.438953/1‑94 (MQ=60)
ATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAT < SRR4302532.4763122/94‑1 (MQ=60)
TTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC < SRR4302532.2381239/94‑1 (MQ=60)
TTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCC < SRR4302532.715584/94‑1 (MQ=60)
TTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCA < SRR4302532.2136590/94‑1 (MQ=60)
CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACA > SRR4302532.215412/1‑94 (MQ=60)
CTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACT > SRR4302532.3771178/1‑94 (MQ=60)
CTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACT > SRR4302532.1388848/1‑94 (MQ=60)
CTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACT > SRR4302532.5649067/1‑94 (MQ=60)
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CGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACT > NC_000913/3975220‑3975406
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
