Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,975,313 |
Δ1 bp |
intergenic (+173/‑901) |
wzxE → / → wecF |
putative cytochrome/TDP‑Fuc4NAc:lipidII transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,975,310 | 0 | C | . | 98.0%
| 1129.9
/ 14.3
| 246 | intergenic (+170/‑904) | wzxE/wecF | putative cytochrome/TDP‑Fuc4NAc:lipidII transferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (97/144); minor base T (4/1); total (101/145) |
| Fisher's exact test for biased strand distribution p-value = 1.62e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.36e-01 |
Only 100 of 267 total aligned reads displayed.
GCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC > NC_000913/3975218‑3975399
|
gCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTc > 2:2426683/1‑93 (MQ=255)
gCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTc > 1:4452358/1‑93 (MQ=255)
ccGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTcc > 1:706259/1‑93 (MQ=255)
gcgACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccct < 2:4629199/93‑2 (MQ=255)
gcgACGAGCGAGCACGCGCGCGAGTTTATGGGTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccct > 1:14392/1‑92 (MQ=255)
cgacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctg < 1:4239517/93‑3 (MQ=255)
gacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctgg < 1:1598340/93‑4 (MQ=255)
cgagcgagCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGa > 2:5926688/1‑93 (MQ=255)
gagcgcgcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaa < 2:4611100/93‑1 (MQ=255)
gagcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaa > 2:3505520/1‑93 (MQ=255)
gagcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaa > 2:4041290/1‑93 (MQ=255)
agcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaaa > 2:4708697/1‑93 (MQ=255)
cgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaaaaa > 2:1071221/1‑93 (MQ=255)
gagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaaaaaa > 1:574953/1‑93 (MQ=255)
agcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAAt < 2:2939149/93‑1 (MQ=255)
gcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATc > 2:3177463/1‑93 (MQ=255)
cgcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCt > 1:3317636/1‑93 (MQ=255)
gcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTg < 1:3704048/93‑1 (MQ=255)
gcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTg > 1:2000795/1‑93 (MQ=255)
gcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGc > 2:537680/1‑93 (MQ=255)
gcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGc > 1:1011463/1‑93 (MQ=255)
gcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGc > 1:2648074/1‑93 (MQ=255)
gcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCgg > 2:922180/1‑93 (MQ=255)
cgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGa > 2:2804644/1‑93 (MQ=255)
cgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGa > 2:5080312/1‑93 (MQ=255)
cgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGCAAAACATCGCTGGCAGa > 2:2658560/1‑93 (MQ=255)
gAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGaa > 1:3069537/1‑93 (MQ=255)
gAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGaa < 1:1517552/93‑1 (MQ=255)
gAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGAGAAAAAATCGCTGGCGGaa < 1:6445245/93‑1 (MQ=255)
aGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAg < 2:6407525/93‑1 (MQ=255)
gTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGc < 1:479577/93‑1 (MQ=255)
gTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGc > 1:6205954/1‑93 (MQ=255)
ttATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCgg < 2:6071214/93‑1 (MQ=255)
tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGt < 1:2489802/93‑1 (MQ=255)
tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGt < 1:6239870/93‑1 (MQ=255)
tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGt > 2:6601639/1‑93 (MQ=255)
tGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCa < 1:5128836/93‑1 (MQ=255)
ggTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCAt > 1:281305/1‑93 (MQ=255)
ggTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCAt < 2:1764560/93‑1 (MQ=255)
gttgttGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATc < 2:1202966/93‑1 (MQ=255)
gttgttGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATc < 1:6530608/93‑1 (MQ=255)
ttgttgGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATcg < 2:1500928/93‑1 (MQ=255)
tgttgGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATcgc < 2:2548015/93‑1 (MQ=255)
ggCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGaaa < 2:5935136/93‑1 (MQ=255)
ggCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGaaa < 1:5867966/93‑1 (MQ=255)
gCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAg < 1:1825043/93‑1 (MQ=255)
aGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCaa < 2:3603754/93‑1 (MQ=255)
aGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCaa > 1:5260954/1‑93 (MQ=255)
acgacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAg > 2:1808940/1‑93 (MQ=255)
cgacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGc > 2:550718/1‑93 (MQ=255)
cgacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGc < 2:129959/93‑1 (MQ=255)
gacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCt < 2:5827054/93‑1 (MQ=255)
gacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGAAAAAGCt > 1:2176258/1‑93 (MQ=255)
acgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTa > 2:3972712/1‑93 (MQ=255)
acgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTa < 2:555899/93‑1 (MQ=255)
cgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTaa > 2:4963897/1‑93 (MQ=255)
ggCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAc < 1:3266404/93‑1 (MQ=255)
ggCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAc < 2:2441981/93‑1 (MQ=255)
ggCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAc > 1:128077/1‑93 (MQ=255)
gCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAcc < 2:6224929/93‑1 (MQ=255)
cTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCg < 2:3076941/93‑1 (MQ=255)
cTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCg > 1:2218156/1‑93 (MQ=255)
cTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCg > 2:5718656/1‑93 (MQ=255)
ttAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGt < 1:5235205/93‑1 (MQ=255)
ttAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGt < 1:5508260/93‑1 (MQ=255)
tAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGta < 2:6267125/93‑2 (MQ=255)
tAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTc > 1:1132571/1‑93 (MQ=255)
tAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTc < 1:838009/93‑1 (MQ=255)
tGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagca < 2:778928/93‑1 (MQ=255)
tGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagca < 2:4195996/93‑1 (MQ=255)
gATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagcag < 1:651592/93‑1 (MQ=255)
gATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagcag > 2:1664749/1‑93 (MQ=255)
tAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCg > 2:4304576/1‑93 (MQ=255)
aGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGt < 1:2204436/93‑1 (MQ=255)
aGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGt < 2:4812049/93‑1 (MQ=255)
aGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGATGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGt > 2:1977195/1‑93 (MQ=255)
tGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGtttt > 2:2054079/1‑93 (MQ=255)
gTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGttttt < 1:3754145/93‑1 (MQ=255)
gTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGttttt > 1:4871269/1‑93 (MQ=255)
gTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGttttt > 1:4971126/1‑93 (MQ=255)
tCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGtttttt < 2:6544736/93‑1 (MQ=255)
ccGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttc < 1:2984968/93‑1 (MQ=255)
ccGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttc > 2:4678553/1‑93 (MQ=255)
ccGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttc < 2:2580219/93‑1 (MQ=255)
cGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttct < 2:4482672/93‑1 (MQ=255)
gcgcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttcttc < 2:375819/93‑1 (MQ=255)
gcgcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttcttc < 1:769651/93‑1 (MQ=255)
cgcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTcc < 2:3322209/93‑1 (MQ=255)
cgcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTcc < 1:3456312/93‑1 (MQ=255)
gcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCa < 2:3668889/93‑1 (MQ=255)
gcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCa < 2:1734153/93‑1 (MQ=255)
tttCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACg > 2:2511577/1‑93 (MQ=255)
tttCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACg > 2:1887815/1‑93 (MQ=255)
cTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTc < 1:5926688/93‑1 (MQ=255)
cTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTc < 2:2187404/93‑1 (MQ=255)
tgtgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCCGCAGCGTTTTTTCTTCTACGGTCa > 1:4601867/1‑93 (MQ=255)
tgtgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCa > 1:2950942/1‑93 (MQ=255)
gtgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAg < 1:2416968/93‑1 (MQ=255)
attttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCaa > 2:3134071/2‑93 (MQ=255)
ttttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAt < 1:6301662/93‑1 (MQ=255)
|
GCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC > NC_000913/3975218‑3975399
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACT > NC_000913/3975220‑3975406
|
CGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCT < SRR4302547.6338331/94‑1 (MQ=60)
CGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCT > SRR4302547.2231273/1‑94 (MQ=60)
CGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCT < SRR4302547.3017853/94‑1 (MQ=60)
CGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCT > SRR4302547.5910880/1‑94 (MQ=60)
CGCGACGAGCGAGCACGCGCGCGAGTTTATGGGTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCT > SRR4302547.14658/1‑94 (MQ=60)
CGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGG > SRR4302547.657986/1‑94 (MQ=60)
CGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGG < SRR4302547.4326206/94‑1 (MQ=60)
GACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGG > SRR4302547.6370704/1‑94 (MQ=60)
GACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGG < SRR4302547.1630057/94‑1 (MQ=60)
CGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAA > SRR4302547.585267/1‑94 (MQ=60)
CGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAA > SRR4302547.378429/1‑94 (MQ=60)
GGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATC < SRR4302547.5806910/94‑1 (MQ=60)
GCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCG < SRR4302547.2815328/94‑1 (MQ=60)
CACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGC > SRR4302547.4122792/1‑94 (MQ=60)
ACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCT < SRR4302547.1560912/94‑1 (MQ=60)
ACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCT > SRR4302547.3384586/1‑94 (MQ=60)
ACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCT < SRR4302547.6192838/94‑1 (MQ=60)
CGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTG < SRR4302547.6530607/94‑1 (MQ=60)
CGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTG < SRR4302547.5146486/94‑1 (MQ=60)
CGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTG > SRR4302547.2040604/1‑94 (MQ=60)
CGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTG < SRR4302547.2789287/94‑1 (MQ=60)
GCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGG < SRR4302547.3779654/94‑1 (MQ=60)
GCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGG < SRR4302547.92662/94‑1 (MQ=60)
CGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGC > SRR4302547.2701339/1‑94 (MQ=60)
CGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGC > SRR4302547.1031227/1‑94 (MQ=60)
CGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAA > SRR4302547.3130533/1‑94 (MQ=60)
CGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAA > SRR4302547.3683933/1‑94 (MQ=60)
GAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAG < SRR4302547.4964365/94‑1 (MQ=60)
GAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAG < SRR4302547.1547782/94‑1 (MQ=60)
GAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGAGAAAAAATCGCTGGCGGAAG < SRR4302547.6579540/94‑1 (MQ=60)
AGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGC > SRR4302547.6334794/1‑94 (MQ=60)
AGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGC < SRR4302547.504683/94‑1 (MQ=60)
GTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCG < SRR4302547.488387/94‑1 (MQ=60)
GTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCG > SRR4302547.3293814/1‑94 (MQ=60)
GTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCG < SRR4302547.7548/94‑1 (MQ=60)
GTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCG < SRR4302547.2439871/94‑1 (MQ=60)
TTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGG < SRR4302547.161840/94‑1 (MQ=60)
TATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTC < SRR4302547.2540105/94‑1 (MQ=60)
TATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTC < SRR4302547.6369502/94‑1 (MQ=60)
TGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCAT > SRR4302547.286538/1‑94 (MQ=60)
TGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCAT < SRR4302547.5234517/94‑1 (MQ=60)
GGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATC > SRR4302547.1874980/1‑94 (MQ=60)
GTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCG > SRR4302547.4734963/1‑94 (MQ=60)
GTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCG < SRR4302547.6666532/94‑1 (MQ=60)
TTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGC < SRR4302547.5273222/94‑1 (MQ=60)
TGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCG < SRR4302547.5162010/94‑1 (MQ=60)
GTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGA < SRR4302547.1275641/94‑1 (MQ=60)
TGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAA > SRR4302547.964010/1‑94 (MQ=60)
GGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAG < SRR4302547.1372677/94‑1 (MQ=60)
GGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAG < SRR4302547.5989415/94‑1 (MQ=60)
GCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGC < SRR4302547.1861124/94‑1 (MQ=60)
GCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGC < SRR4302547.1202824/94‑1 (MQ=60)
GCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGC > SRR4302547.2113402/1‑94 (MQ=60)
CAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑TCCTGGGAACAAATCGCTGGCTGAAGCGGTCATCGAGAAAGCA > SRR4302547.3381544/1‑94 (MQ=60)
CAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCA < SRR4302547.5366661/94‑1 (MQ=60)
CAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCA > SRR4302547.2241253/1‑94 (MQ=60)
CAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAACA > SRR4302547.4871444/1‑94 (MQ=60)
AAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAA > SRR4302547.3045058/1‑94 (MQ=60)
AAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAA > SRR4302547.5369297/1‑94 (MQ=60)
AGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAA > SRR4302547.6029714/1‑94 (MQ=60)
GACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAG < SRR4302547.4364850/94‑1 (MQ=60)
CGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGAAAAAGCT > SRR4302547.2219835/1‑94 (MQ=60)
CGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAC < SRR4302547.3686480/94‑1 (MQ=60)
CGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAC < SRR4302547.476524/94‑1 (MQ=60)
CGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAC > SRR4302547.130395/1‑94 (MQ=60)
GGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACC > SRR4302547.5801570/1‑94 (MQ=60)
GGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACC < SRR4302547.6710064/94‑1 (MQ=60)
GGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACC < SRR4302547.3331756/94‑1 (MQ=60)
GGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACC < SRR4302547.2148657/94‑1 (MQ=60)
GCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCG > SRR4302547.2262836/1‑94 (MQ=60)
CTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAACTAACCGT > SRR4302547.4068051/1‑94 (MQ=60)
TTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTC < SRR4302547.5342970/94‑1 (MQ=60)
TTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTC > SRR4302547.1713590/1‑94 (MQ=60)
TTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTC > SRR4302547.1155427/1‑94 (MQ=60)
TTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTC < SRR4302547.5621989/94‑1 (MQ=60)
TAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCA < SRR4302547.853995/94‑1 (MQ=60)
TAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCA > SRR4302547.3362253/1‑94 (MQ=60)
TGATAGCTGTCCGGCGCTTTCTGTCCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAG < SRR4302547.6658174/94‑1 (MQ=60)
GATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGC < SRR4302547.663591/94‑1 (MQ=60)
TAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGT < SRR4302547.5246237/94‑1 (MQ=60)
AGTTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTT < SRR4302547.6661339/94‑1 (MQ=60)
AGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTT < SRR4302547.6425121/94‑1 (MQ=60)
AGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTT < SRR4302547.2248733/94‑1 (MQ=60)
GCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTT > SRR4302547.5530651/1‑94 (MQ=60)
CTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTT > SRR4302547.2491764/1‑94 (MQ=60)
TGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTT > SRR4302547.4972216/1‑94 (MQ=60)
TGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTT > SRR4302547.2888203/1‑94 (MQ=60)
TGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTT > SRR4302547.5073975/1‑94 (MQ=60)
GTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTT < SRR4302547.3830743/94‑1 (MQ=60)
TCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTC < SRR4302547.4902514/94‑1 (MQ=60)
CCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCT < SRR4302547.3044372/94‑1 (MQ=60)
CCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCT < SRR4302547.2506827/94‑1 (MQ=60)
GGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTC > SRR4302547.2639653/1‑94 (MQ=60)
GCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCC < SRR4302547.784195/94‑1 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA < SRR4302547.3526774/94‑1 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA < SRR4302547.6018677/94‑1 (MQ=60)
GCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAC > SRR4302547.1527055/1‑94 (MQ=60)
GCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAC < SRR4302547.2255637/94‑1 (MQ=60)
CTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACG > SRR4302547.3076348/1‑94 (MQ=60)
CTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACG > SRR4302547.838498/1‑94 (MQ=60)
TTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGG > SRR4302547.6680086/1‑94 (MQ=60)
CTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCCGCAGCGTTTTTTCTTCTACGGTCA > SRR4302547.4697101/1‑94 (MQ=60)
CTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCA > SRR4302547.3009695/1‑94 (MQ=60)
CTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCA < SRR4302547.6049558/94‑1 (MQ=60)
TGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAG < SRR4302547.1067546/94‑1 (MQ=60)
TGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAG < SRR4302547.5608811/94‑1 (MQ=60)
TGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAG > SRR4302547.4672579/1‑94 (MQ=60)
TGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAG < SRR4302547.4393711/94‑1 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGT > SRR4302547.3405826/1‑94 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGT > SRR4302547.1380317/1‑94 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGT < SRR4302547.82212/94‑1 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGT < SRR4302547.2465905/94‑1 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGT < SRR4302547.348972/94‑1 (MQ=60)
TGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTT > SRR4302547.6570689/1‑94 (MQ=60)
GCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTC < SRR4302547.2956646/94‑1 (MQ=60)
CAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCA < SRR4302547.2309380/94‑1 (MQ=60)
AATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAA > SRR4302547.6177666/1‑94 (MQ=60)
AATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAA > SRR4302547.1681034/1‑94 (MQ=60)
TTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC > SRR4302547.3324039/1‑94 (MQ=60)
TTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC < SRR4302547.6432651/94‑1 (MQ=60)
TTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCC < SRR4302547.118818/94‑1 (MQ=60)
TCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCAC > SRR4302547.68705/1‑94 (MQ=60)
TCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCAC < SRR4302547.127383/94‑1 (MQ=60)
CCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACAC > SRR4302547.5027884/1‑94 (MQ=60)
CCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACAC > SRR4302547.5452854/1‑94 (MQ=60)
CCTGGGAAAAAATCGATGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACAC > SRR4302547.366814/1‑94 (MQ=60)
CTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACT > SRR4302547.3985922/1‑94 (MQ=60)
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CGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACT > NC_000913/3975220‑3975406
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
