Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,202,108 |
A→G |
E404G (GAA→GGA) |
hydG → |
HydG |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,202,108 | 0 | A | G | 93.2%
| 683.8
/ 29.1
| 220 | E404G (GAA→GGA) | hydG | HydG |
| Reads supporting (aligned to +/- strand): ref base A (8/7); new base G (104/101); total (112/108) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 |
Only 100 of 249 total aligned reads displayed.
GGGAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAA > NC_000913/4202018‑4202197
|
gggAATTTATTTCCCAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGgtgggag < 1:1735347/93‑1 (MQ=255)
gAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGgtgggagtg < 1:1196577/93‑1 (MQ=255)
atatatTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGgtgggagtgga > 1:588817/1‑93 (MQ=255)
atatatTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGgtgggagtgga > 2:3528916/1‑93 (MQ=255)
tatTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGaaaa < 2:700541/93‑1 (MQ=255)
atTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGaaaaa > 2:4309349/1‑93 (MQ=255)
tttCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAag > 2:1589128/1‑93 (MQ=255)
ttCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAaga > 1:3332985/1‑93 (MQ=255)
ttCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAaga < 1:3416459/93‑1 (MQ=255)
ttCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAaga < 1:4174822/93‑1 (MQ=255)
tcccGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAaga < 2:127912/91‑1 (MQ=255)
tCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAagag < 2:4593287/93‑1 (MQ=255)
tCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAagag > 1:6139510/1‑93 (MQ=255)
ccGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAgg < 1:2061507/93‑1 (MQ=255)
ccGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAgg < 2:4575010/93‑1 (MQ=255)
cGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAggg > 2:284947/1‑92 (MQ=255)
aaCGCGAGCTGCCGCGGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGa < 2:200657/93‑1 (MQ=255)
gcgAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTc > 2:2551087/1‑93 (MQ=255)
gcgAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTc < 2:3949851/93‑1 (MQ=255)
cgAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCt > 2:2142111/1‑93 (MQ=255)
cgAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGT‑GAAAAAGAGGTGATTCTg > 1:2764373/1‑93 (MQ=255)
gAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTg > 2:3469150/1‑93 (MQ=255)
aGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTgg > 1:3747175/1‑93 (MQ=255)
gCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTggc < 1:1115618/93‑1 (MQ=255)
gCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTggc < 2:6002583/93‑1 (MQ=255)
tGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTggcgg > 2:4959929/1‑93 (MQ=255)
gCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTggcggc < 1:5559200/93‑1 (MQ=255)
cGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGgcgc < 1:160891/93‑1 (MQ=255)
gCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCt > 2:1109696/1‑93 (MQ=255)
cTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTg > 2:1943310/1‑93 (MQ=255)
cTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTg > 1:1655007/1‑93 (MQ=255)
cTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTg > 2:6121591/1‑93 (MQ=255)
cTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGGGATTCTGGCGGCGCTg > 1:5361256/1‑93 (MQ=255)
ggCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGga < 1:4592356/93‑1 (MQ=255)
gCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGgag < 1:2751621/93‑1 (MQ=255)
gCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGgag < 2:2943389/93‑1 (MQ=255)
gATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGaa > 2:3902943/1‑93 (MQ=255)
gATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGaa > 2:3193005/1‑93 (MQ=255)
aTTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGaaa > 2:3743791/1‑93 (MQ=255)
ttGCCAGTACGCCGATCCCGCTGGTACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGaaaa < 2:5563823/93‑1 (MQ=255)
ttGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGaaaa < 1:5732822/93‑1 (MQ=255)
ttGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGaaaa < 1:3901798/93‑1 (MQ=255)
tGCCGGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAAc > 1:4037454/1‑93 (MQ=255)
tGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAAc < 1:520268/93‑1 (MQ=255)
ccAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACgg < 2:5128066/93‑1 (MQ=255)
ccAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACgg > 2:3697462/1‑93 (MQ=255)
ccAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACgg < 2:659763/93‑1 (MQ=255)
cAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACggg < 1:6012520/93‑1 (MQ=255)
aGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGggc > 1:3022244/1‑93 (MQ=255)
gTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGggcg > 1:1803569/1‑93 (MQ=255)
aCGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGggcggc < 1:696219/93‑1 (MQ=255)
cGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGca > 1:1867583/1‑93 (MQ=255)
gCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGcaa > 2:750356/1‑93 (MQ=255)
ccGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGcaaa > 2:5151863/1‑92 (MQ=255)
gATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGcaacaa > 1:989603/1‑93 (MQ=255)
aTCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACaaa > 1:3230889/1‑93 (MQ=255)
tCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACaaaa < 2:4915534/93‑1 (MQ=255)
cccGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAAc < 2:4628851/93‑1 (MQ=255)
cccGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAAc < 2:4052369/93‑1 (MQ=255)
ccGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAAcc > 1:1007241/1‑93 (MQ=255)
cGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCg > 1:2136252/1‑93 (MQ=255)
gCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGa > 1:1389246/1‑93 (MQ=255)
gCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGa < 2:4104276/93‑1 (MQ=255)
gCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGa < 2:1297023/93‑1 (MQ=255)
cTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGaa < 2:4809571/93‑1 (MQ=255)
cTGGGACAAAGTCAGGATATTAAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCCACCAAACCGaa > 1:2611327/1‑93 (MQ=255)
gggACAAAGTCATGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAgc > 2:2041543/1‑93 (MQ=255)
gggACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAgc > 2:2273827/1‑93 (MQ=255)
gggACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAgc > 2:5869373/1‑93 (MQ=255)
gggACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGCAAACGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAgc < 2:5461118/93‑1 (MQ=255)
gACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAGAACGGGGGGCAAAAAAACCGAAgccg > 1:2404337/1‑93 (MQ=255)
aaaGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGccc > 1:1942111/1‑93 (MQ=255)
aaGTCAGGATATTCAGCCGTTGGCGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGTGGCAACAAAACCGAAGCCGCCCg < 1:2267244/93‑1 (MQ=255)
gTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGAAGAAAACGCGCGGCAACAAAACCAAAGCCGCCCgcc > 2:4412977/1‑91 (MQ=255)
cAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAg > 2:2791236/1‑93 (MQ=255)
cAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAg > 1:889042/1‑93 (MQ=255)
cAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAg < 2:1862176/93‑1 (MQ=255)
ggATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCCGtt > 1:3212327/1‑93 (MQ=255)
ggATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGtt < 1:4128508/93‑1 (MQ=255)
gATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTa < 1:5077025/93‑1 (MQ=255)
gATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTa < 2:1550520/93‑1 (MQ=255)
gtatTCAGGCGTTGGTGGGAGTGGAAAAAGGGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAg < 2:1726290/92‑1 (MQ=255)
ttCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGa < 1:3668090/93‑1 (MQ=255)
ttCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGa < 1:433400/93‑1 (MQ=255)
ttCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGa > 2:3047654/1‑93 (MQ=255)
tCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGAt < 1:5841029/93‑1 (MQ=255)
tCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGAt < 1:1495862/93‑1 (MQ=255)
cAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATc < 1:2944733/93‑1 (MQ=255)
gCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCAc > 1:4961600/1‑93 (MQ=255)
gCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCAc < 2:2333929/93‑1 (MQ=255)
cGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAAGAAAAACGAAGACGCCCGTCAGTTAGGGATAAcgc > 1:5414682/1‑93 (MQ=255)
cGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCAcgc < 2:2413998/93‑1 (MQ=255)
cGTTGGTGGAAGTGGAAAAAGATGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCAcgc > 2:1191326/1‑93 (MQ=255)
cGTTGGGGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCAcgc > 1:5975424/1‑93 (MQ=255)
gTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCAcgcg > 1:4765881/1‑93 (MQ=255)
ttGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACgcgc > 1:4387762/1‑93 (MQ=255)
ttGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACgcgc > 1:4536142/1‑93 (MQ=255)
ttGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACgcgc > 2:3380667/1‑93 (MQ=255)
tgggagtggaaAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCaaaa < 1:1741317/93‑1 (MQ=255)
tgggagtggaaAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCaaaa < 1:633654/93‑1 (MQ=255)
|
GGGAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAA > NC_000913/4202018‑4202197
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGGGGAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAACGCT > NC_000913/4202015‑4202201
|
CCGGGTAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGG < SRR4302532.723877/94‑1 (MQ=60)
CCGGGGAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGG < SRR4302532.2345691/94‑1 (MQ=60)
CGGGGAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGA < SRR4302532.1247008/94‑1 (MQ=60)
GGGAATTTATTTCCCAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGT < SRR4302532.1793755/94‑1 (MQ=60)
GGGAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGT > SRR4302532.969768/1‑94 (MQ=60)
GAAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTG < SRR4302532.64391/94‑1 (MQ=60)
GAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGG < SRR4302532.1236589/94‑1 (MQ=60)
GAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGG > SRR4302532.3139184/1‑94 (MQ=60)
GAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGG < SRR4302532.6315500/94‑1 (MQ=60)
GAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGG > SRR4302532.3001554/1‑94 (MQ=60)
GAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGG > SRR4302532.5236462/1‑94 (MQ=60)
GAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGG > SRR4302532.1825933/1‑94 (MQ=60)
AATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGA > SRR4302532.609362/1‑94 (MQ=60)
AATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGA > SRR4302532.219295/1‑94 (MQ=60)
ATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAA < SRR4302532.1936922/94‑1 (MQ=60)
ATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGCGGGAGCGGAAAAAG > SRR4302532.4512810/1‑94 (MQ=60)
TTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGA > SRR4302532.3444144/1‑94 (MQ=60)
TTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAG < SRR4302532.4314842/94‑1 (MQ=60)
TTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAG < SRR4302532.4839527/94‑1 (MQ=60)
TTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAG < SRR4302532.3530895/94‑1 (MQ=60)
TTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAG > SRR4302532.6351295/1‑94 (MQ=60)
TCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGG < SRR4302532.4747716/94‑1 (MQ=60)
CCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGT < SRR4302532.5579776/94‑1 (MQ=60)
CCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGT < SRR4302532.5534769/94‑1 (MQ=60)
CCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGT < SRR4302532.2130175/94‑1 (MQ=60)
CGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTG > SRR4302532.1703376/1‑94 (MQ=60)
GAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGA < SRR4302532.2109579/94‑1 (MQ=60)
AACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGAT < SRR4302532.3330096/94‑1 (MQ=60)
CGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTC > SRR4302532.5762086/1‑94 (MQ=60)
GCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCT < SRR4302532.3625356/94‑1 (MQ=60)
GCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGT‑GAAAAAGAGGTGATTCTG > SRR4302532.2857191/1‑94 (MQ=60)
CGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTG < SRR4302532.5313466/94‑1 (MQ=60)
CGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTG < SRR4302532.4267682/94‑1 (MQ=60)
GAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGG > SRR4302532.3873130/1‑94 (MQ=60)
GAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGG < SRR4302532.2295700/94‑1 (MQ=60)
GAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTGG > SRR4302532.552524/1‑94 (MQ=60)
GCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCG < SRR4302532.1152895/94‑1 (MQ=60)
GCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCG < SRR4302532.2840817/94‑1 (MQ=60)
TGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGC < SRR4302532.3403302/94‑1 (MQ=60)
GCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCG < SRR4302532.5752224/94‑1 (MQ=60)
CGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCT < SRR4302532.166243/94‑1 (MQ=60)
CGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCT > SRR4302532.2393039/1‑94 (MQ=60)
CGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCT > SRR4302532.6106418/1‑94 (MQ=60)
GCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTG > SRR4302532.2644429/1‑94 (MQ=60)
GCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTG > SRR4302532.4129948/1‑94 (MQ=60)
GCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTG > SRR4302532.1711103/1‑94 (MQ=60)
GCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGGGATTCTGGCGGCGCTG > SRR4302532.5547119/1‑94 (MQ=60)
CTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGG < SRR4302532.3964993/94‑1 (MQ=60)
GGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAG < SRR4302532.4748915/94‑1 (MQ=60)
GGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAG < SRR4302532.3359859/94‑1 (MQ=60)
GCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGA < SRR4302532.2844038/94‑1 (MQ=60)
CGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGGA > SRR4302532.6137829/1‑94 (MQ=60)
TTGCCGGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAAC > SRR4302532.4173449/1‑94 (MQ=60)
TTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAAC < SRR4302532.5667053/94‑1 (MQ=60)
TTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAAC < SRR4302532.5932453/94‑1 (MQ=60)
TTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAAC < SRR4302532.4033388/94‑1 (MQ=60)
TGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACG > SRR4302532.2741182/1‑94 (MQ=60)
TGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACG < SRR4302532.538445/94‑1 (MQ=60)
TGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACG > SRR4302532.1775373/1‑94 (MQ=60)
GCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGG < SRR4302532.4973202/94‑1 (MQ=60)
GCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGG > SRR4302532.4425602/1‑94 (MQ=60)
CCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGG < SRR4302532.3828263/94‑1 (MQ=60)
CAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGC < SRR4302532.6220131/94‑1 (MQ=60)
CAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGC > SRR4302532.3121933/1‑94 (MQ=60)
AGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCG > SRR4302532.1863774/1‑94 (MQ=60)
AGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCG > SRR4302532.4453308/1‑94 (MQ=60)
TACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGC > SRR4302532.2933464/1‑94 (MQ=60)
ACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCA < SRR4302532.720062/94‑1 (MQ=60)
ACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCA > SRR4302532.1929449/1‑94 (MQ=60)
ACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCA > SRR4302532.3109765/1‑94 (MQ=60)
CGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAA > SRR4302532.140589/1‑94 (MQ=60)
GCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAAC < SRR4302532.4197264/94‑1 (MQ=60)
CCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAATA > SRR4302532.1918770/1‑94 (MQ=60)
CCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACA < SRR4302532.1758912/94‑1 (MQ=60)
CGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAA > SRR4302532.1599383/1‑94 (MQ=60)
CGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAA > SRR4302532.1023403/1‑94 (MQ=60)
CGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAA > SRR4302532.41867/1‑94 (MQ=60)
GATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAA > SRR4302532.3338121/1‑94 (MQ=60)
GATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAA > SRR4302532.3668519/1‑94 (MQ=60)
ATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAAGTGATTCTGGCGGCGCTGGAGATAACGGGCGGCAACAAAA > SRR4302532.6198842/1‑94 (MQ=60)
CCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACC > SRR4302532.1041499/1‑94 (MQ=60)
CCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACC < SRR4302532.3883586/94‑1 (MQ=60)
CCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCG > SRR4302532.2207598/1‑94 (MQ=60)
CGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGA > SRR4302532.6241743/1‑94 (MQ=60)
CGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGA > SRR4302532.1435817/1‑94 (MQ=60)
GCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAA < SRR4302532.1662355/94‑1 (MQ=60)
GCTGGGACAAAGTCAGGATATTAAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCCACCAAACCGAA > SRR4302532.2698684/1‑94 (MQ=60)
CTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAG < SRR4302532.691186/94‑1 (MQ=60)
CTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAG < SRR4302532.1799446/94‑1 (MQ=60)
TGGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGC > SRR4302532.1848302/1‑94 (MQ=60)
GGGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCC > SRR4302532.2469293/1‑94 (MQ=60)
GGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAGAACGGGGGGCAAAAAAACCGAAGCCG > SRR4302532.2484357/1‑94 (MQ=60)
GGACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCG < SRR4302532.1274280/94‑1 (MQ=60)
ACAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCC < SRR4302532.1226481/94‑1 (MQ=60)
CAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCC > SRR4302532.6008195/1‑94 (MQ=60)
CAAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCC > SRR4302532.2006689/1‑94 (MQ=60)
CAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCC > SRR4302532.3192828/1‑94 (MQ=60)
AAAGTCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAAAGGGCGGCAACAAAACCGAAGCCGCCCG > SRR4302532.2844543/1‑94 (MQ=60)
AAGTCAGGATATTCAGCCGTTGGCGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGTGGCAACAAAACCGAAGCCGCCCGT < SRR4302532.2342492/94‑1 (MQ=60)
TCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAG > SRR4302532.919412/1‑94 (MQ=60)
TCAGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAG < SRR4302532.6058795/94‑1 (MQ=60)
TCAGGATATTCAGCCGTTGGGGGGAGAGGAAAAAGAGGGGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAACCGCACGTCCG > SRR4302532.5594605/1‑94 (MQ=60)
AGGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCCGTT > SRR4302532.3318986/1‑94 (MQ=60)
GGATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTA < SRR4302532.4267034/94‑1 (MQ=60)
GATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAG < SRR4302532.683952/94‑1 (MQ=60)
GATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAG < SRR4302532.5236822/94‑1 (MQ=60)
GATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAG < SRR4302532.5251564/94‑1 (MQ=60)
GATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAAACGAAGACGACCGTCAGTgat > SRR4302532.6022800/1‑91 (MQ=60)
ATATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGG > SRR4302532.4835105/1‑94 (MQ=60)
TATTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGG < SRR4302532.5653932/94‑1 (MQ=60)
TTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGAT < SRR4302532.448401/94‑1 (MQ=60)
TTCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGAT < SRR4302532.3791309/94‑1 (MQ=60)
TTCAGCCGTGGGTGGGAGTGGAAAAAGAGGTGATTCGGGCGGCGCTGGAGAAAACGGGCGGCAACAAACCCGAAGCCGCCCGTCAGTTAGGGAG < SRR4302532.3853018/94‑1 (MQ=60)
TCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATC < SRR4302532.1546320/94‑1 (MQ=60)
TCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATC < SRR4302532.6043757/94‑1 (MQ=60)
TCAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATC < SRR4302532.2150540/94‑1 (MQ=60)
CAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCA > SRR4302532.739885/1‑94 (MQ=60)
CAGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCA < SRR4302532.3042453/94‑1 (MQ=60)
AGCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCAC > SRR4302532.5131769/1‑94 (MQ=60)
GCCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACG < SRR4302532.145593/94‑1 (MQ=60)
CCGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAAGAAAAACGAAGACGCCCGTCAGTTAGGGATAACGC > SRR4302532.5602307/1‑94 (MQ=60)
CCGTTGGGGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGC > SRR4302532.6181966/1‑94 (MQ=60)
CGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCG < SRR4302532.1145199/94‑1 (MQ=60)
CGTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCG > SRR4302532.4929271/1‑94 (MQ=60)
GTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGC > SRR4302532.4536879/1‑94 (MQ=60)
GTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGC > SRR4302532.4690977/1‑94 (MQ=60)
GTTGGTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGC > SRR4302532.3449608/1‑94 (MQ=60)
GTTGGTGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCtcccgccagataagaatcaacaga > SRR4302532.6223458/1‑70 (MQ=60)
GTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAA < SRR4302532.4689719/94‑1 (MQ=60)
GTGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAA < SRR4302532.4689720/94‑1 (MQ=60)
TGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAAC < SRR4302532.655766/94‑1 (MQ=60)
TGGGAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAAC < SRR4302532.1799915/94‑1 (MQ=60)
GAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAACGCT < SRR4302532.1282458/94‑1 (MQ=60)
GAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAACGCT < SRR4302532.3764901/94‑1 (MQ=60)
|
CCGGGGAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAACGCT > NC_000913/4202015‑4202201
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
