Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,573,190 |
Δ1 bp |
coding (1487/1542 nt) |
yjiU → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,573,189 | 0 | G | . | 100.0%
| 1010.4
/ NA
| 215 | coding (1486/1542 nt) | yjiU | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (98/117); total (98/117) |
Only 100 of 236 total aligned reads displayed.
TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACC > NC_000913/4573097‑4573276
|
ttatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAg > 1:3062708/1‑93 (MQ=255)
ttatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAg < 1:4235959/93‑1 (MQ=255)
ttatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAg > 2:5510614/1‑93 (MQ=255)
tatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAga < 2:4493280/93‑2 (MQ=255)
atCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgag < 1:5199467/93‑3 (MQ=255)
atCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgag < 2:676384/93‑3 (MQ=255)
tCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgagc > 2:824790/1‑90 (MQ=255)
cAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgagca < 1:5141684/93‑5 (MQ=255)
cAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgagca > 2:2964311/1‑89 (MQ=255)
cAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgagaa > 1:1292821/1‑89 (MQ=255)
aTACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCata > 2:1137387/1‑93 (MQ=255)
aTACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCata < 2:4431888/93‑1 (MQ=255)
tACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCatat > 1:1760961/1‑93 (MQ=255)
tACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCatat < 2:1968874/93‑1 (MQ=255)
aTGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGAc < 2:3671757/93‑1 (MQ=255)
aTGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGAc < 2:4014994/93‑1 (MQ=255)
ggCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACtt < 2:2282720/93‑1 (MQ=255)
gCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACttt < 1:561227/93‑1 (MQ=255)
gCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACttt > 1:238971/1‑93 (MQ=255)
tGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACttttt > 2:1998828/1‑93 (MQ=255)
tGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACttttt > 2:1583665/1‑93 (MQ=255)
gAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACtttttt > 1:4839701/1‑92 (MQ=255)
gAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTc < 2:1011024/93‑1 (MQ=255)
gAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTc > 2:5953062/1‑93 (MQ=255)
aaaGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCt > 2:3163965/1‑93 (MQ=255)
aagaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCtt > 2:413137/1‑93 (MQ=255)
agaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCttt > 1:1854507/1‑93 (MQ=255)
agCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAt > 1:3292207/1‑93 (MQ=255)
agCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAt < 1:5936022/93‑1 (MQ=255)
agCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAt > 1:1941400/1‑93 (MQ=255)
gCATGGGGCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGATA‑GAGCATATGACTTTTTCTTTAATc > 2:5255119/1‑93 (MQ=255)
gCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATc > 1:3255449/1‑93 (MQ=255)
gCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATc < 1:3002267/93‑1 (MQ=255)
aTGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCAc < 1:5044204/93‑1 (MQ=255)
aTGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCAc < 2:2257961/93‑1 (MQ=255)
aTGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCAc < 1:564338/93‑1 (MQ=255)
aTGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCAc > 1:3893210/1‑93 (MQ=255)
gggCCCAACTTACCGGACCGGCTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACgg < 2:5293121/93‑1 (MQ=255)
gggCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACgg < 1:1445218/93‑1 (MQ=255)
ggCCCAACTTCCCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGa < 2:3828886/93‑1 (MQ=255)
ggCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGa < 2:2355371/93‑1 (MQ=255)
gCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGAt > 2:5691309/1‑93 (MQ=255)
gCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGAt < 1:3469858/93‑1 (MQ=255)
gCCCAACTTACCGGACCGCTTGCAGTACCGAACCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGAt < 1:4054598/93‑1 (MQ=255)
aaCTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCt > 2:3605649/1‑93 (MQ=255)
aCTTGCCGGACCGCTTGCAGTACTGAAGCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGGCTTTTTCTTTAATCACGGATGCCTg < 2:1977777/93‑1 (MQ=255)
aCTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTg < 1:3824067/93‑1 (MQ=255)
aCTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTg < 2:2893702/93‑1 (MQ=255)
aCTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTg > 2:3391334/1‑93 (MQ=255)
ttACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGa < 1:2462940/93‑1 (MQ=255)
ttACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGa > 2:3862345/1‑93 (MQ=255)
tACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAt > 1:6139763/1‑93 (MQ=255)
ccGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAttt < 1:1029459/93‑1 (MQ=255)
cGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAtttc > 1:3738966/1‑92 (MQ=255)
cGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTg < 2:5348490/93‑1 (MQ=255)
ggACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGc > 1:1528419/1‑93 (MQ=255)
ggACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGc > 1:4129650/1‑93 (MQ=255)
gCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCggg > 2:2770954/1‑92 (MQ=255)
gCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGt > 2:2329551/1‑93 (MQ=255)
gCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGt < 2:1753465/93‑1 (MQ=255)
gCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGt > 1:2726501/1‑93 (MQ=255)
cTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTa > 2:2048225/1‑93 (MQ=255)
ttGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTaa > 2:4744084/1‑93 (MQ=255)
tACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATa < 2:5173667/93‑1 (MQ=255)
tACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATa > 2:1364862/1‑93 (MQ=255)
tACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATa > 1:5507770/1‑93 (MQ=255)
aCTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATaa < 2:1545799/93‑1 (MQ=255)
tGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATaaaa < 2:5941766/93‑1 (MQ=255)
tGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATaaaa < 2:2204098/93‑1 (MQ=255)
tGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATaaaa < 1:5189783/93‑1 (MQ=255)
gAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAAt > 2:1786403/1‑93 (MQ=255)
aaaCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATc > 1:4806483/1‑93 (MQ=255)
aaCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATcc > 1:4372798/1‑93 (MQ=255)
aCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCt < 1:1900608/93‑1 (MQ=255)
aCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCt < 2:4251187/93‑1 (MQ=255)
cccGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTg < 1:643709/93‑1 (MQ=255)
cccGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTg < 2:4057656/93‑1 (MQ=255)
ccGATGTCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTgg < 1:2926843/93‑1 (MQ=255)
gATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGCTTTGCCCGGTAACCAATAAAATCCTGTAt > 1:4497054/1‑93 (MQ=255)
aTGGCACCCGTTATTATTTCCCGAAA‑GAGCATATGACTTTTTCTTTACTCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGGTa < 1:5477652/93‑1 (MQ=255)
aTGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATa < 1:683071/93‑1 (MQ=255)
tGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAc < 2:3216406/93‑1 (MQ=255)
cAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGc < 1:2258269/93‑1 (MQ=255)
aCCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCtt > 1:4945609/1‑93 (MQ=255)
aCCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCtt > 2:2551367/1‑93 (MQ=255)
aCCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCtt > 2:5031082/1‑93 (MQ=255)
cGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCtttt > 2:3896279/1‑93 (MQ=255)
cGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCtttt > 1:2510476/1‑93 (MQ=255)
gTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACTGCTTTTa < 2:4590722/93‑1 (MQ=255)
tttttATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaa > 2:471897/1‑93 (MQ=255)
tttttATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaa > 2:4942995/1‑93 (MQ=255)
atttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCt > 1:3647814/1‑93 (MQ=255)
tttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCtt < 1:1057558/93‑1 (MQ=255)
ttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTa > 2:3296191/1‑93 (MQ=255)
ttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTa < 2:3567906/93‑1 (MQ=255)
taCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTaa < 2:5836228/93‑1 (MQ=255)
taCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTaa < 2:3173706/93‑1 (MQ=255)
taCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTaa < 1:208262/93‑1 (MQ=255)
taCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGACGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTaa > 2:2833293/1‑93 (MQ=255)
ccGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAcc > 2:186910/1‑93 (MQ=255)
|
TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACC > NC_000913/4573097‑4573276
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTAT > NC_000913/4573097‑4573282
|
TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGA < SRR4302532.4378211/94‑1 (MQ=60)
TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGA < SRR4302532.4378212/94‑1 (MQ=60)
ATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGC < SRR4302532.5378744/94‑1 (MQ=60)
ATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGC < SRR4302532.1903224/94‑1 (MQ=60)
TCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCA > SRR4302532.3792632/1‑94 (MQ=60)
CAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCAT < SRR4302532.1237359/94‑1 (MQ=60)
CAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCAT < SRR4302532.5318563/94‑1 (MQ=60)
AATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATA > SRR4302532.5455310/1‑94 (MQ=60)
ATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATAT < SRR4302532.1549378/94‑1 (MQ=60)
ATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATAT > SRR4302532.4999632/1‑94 (MQ=60)
ATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATAT > SRR4302532.1820034/1‑94 (MQ=60)
GGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTT > SRR4302532.247208/1‑94 (MQ=60)
GCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTT < SRR4302532.580784/94‑1 (MQ=60)
TGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTT > SRR4302532.687060/1‑94 (MQ=60)
TGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTT > SRR4302532.5006323/1‑94 (MQ=60)
TGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTC > SRR4302532.3694830/1‑94 (MQ=60)
GAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCT < SRR4302532.3151546/94‑1 (MQ=60)
GAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCT < SRR4302532.2497667/94‑1 (MQ=60)
AAGACGCATGGGCCCTACTTACCGGACCGCTTGCAGTACTGAGACCCGATGGCAACCGTTTTTATTTACCGAAA‑GCGCATATGACTTTTTCTTT < SRR4302532.5670054/94‑1 (MQ=60)
AAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTT > SRR4302532.1916020/1‑94 (MQ=60)
AGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTA > SRR4302532.3460216/1‑94 (MQ=60)
GAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAA < SRR4302532.4551644/94‑1 (MQ=60)
AAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGTCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAT < SRR4302532.3533132/94‑1 (MQ=60)
AAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAT < SRR4302532.2342176/94‑1 (MQ=60)
AAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAT > SRR4302532.3401750/1‑94 (MQ=60)
AAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAT > SRR4302532.2005951/1‑94 (MQ=60)
AAGCATGGGCCAAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAT < SRR4302532.738121/94‑1 (MQ=60)
AGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATC < SRR4302532.6141454/94‑1 (MQ=60)
AGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATC > SRR4302532.3363590/1‑94 (MQ=60)
GCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCA < SRR4302532.3101429/94‑1 (MQ=60)
ACATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCA < SRR4302532.3867024/94‑1 (MQ=60)
CATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCAC < SRR4302532.3926867/94‑1 (MQ=60)
CATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCAC > SRR4302532.4024550/1‑94 (MQ=60)
ATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACG < SRR4302532.4224376/94‑1 (MQ=60)
ATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACG < SRR4302532.584023/94‑1 (MQ=60)
ATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACG < SRR4302532.6090886/94‑1 (MQ=60)
ATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACG < SRR4302532.5217243/94‑1 (MQ=60)
GGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGA < SRR4302532.1493960/94‑1 (MQ=60)
GGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGAT < SRR4302532.3391168/94‑1 (MQ=60)
GCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATG < SRR4302532.3586064/94‑1 (MQ=60)
GCCCAACTTACCGGACCGCTTGCAGTACCGAACCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATG < SRR4302532.4190969/94‑1 (MQ=60)
CAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCT < SRR4302532.498886/94‑1 (MQ=60)
CAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCT > SRR4302532.2568853/1‑94 (MQ=60)
AACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCATG > SRR4302532.3987084/1‑94 (MQ=60)
ACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGG < SRR4302532.3953170/94‑1 (MQ=60)
TTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAT < SRR4302532.2544884/94‑1 (MQ=60)
TTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAT > SRR4302532.6351552/1‑94 (MQ=60)
CCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTG < SRR4302532.1064251/94‑1 (MQ=60)
CCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTC > SRR4302532.3864598/1‑94 (MQ=60)
CGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGC > SRR4302532.1580051/1‑94 (MQ=60)
CGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGC > SRR4302532.4268204/1‑94 (MQ=60)
GACTGCTTACAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCC < SRR4302532.4050099/94‑1 (MQ=60)
GACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCC > SRR4302532.5178055/1‑94 (MQ=60)
CGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGT > SRR4302532.2818182/1‑94 (MQ=60)
GCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTA < SRR4302532.6188776/94‑1 (MQ=60)
CTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAA > SRR4302532.4418038/1‑94 (MQ=60)
CAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAA < SRR4302532.5337753/94‑1 (MQ=60)
GTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATA > SRR4302532.5698836/1‑94 (MQ=60)
TACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAA > SRR4302532.5832340/1‑94 (MQ=60)
TACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAA < SRR4302532.2817598/94‑1 (MQ=60)
TACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAA < SRR4302532.4506463/94‑1 (MQ=60)
CTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAA > SRR4302532.4114202/1‑94 (MQ=60)
TGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAAT < SRR4302532.5368646/94‑1 (MQ=60)
TGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAAT > SRR4302532.1582401/1‑94 (MQ=60)
TGAAACCAGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAAT > SRR4302532.5248713/1‑94 (MQ=60)
GAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATC > SRR4302532.4972000/1‑94 (MQ=60)
AAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCC < SRR4302532.57405/94‑1 (MQ=60)
AAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCC > SRR4302532.4521170/1‑94 (MQ=60)
ACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTG < SRR4302532.1963630/94‑1 (MQ=60)
ACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTG > SRR4302532.1491145/1‑94 (MQ=60)
ACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTG < SRR4302532.2184119/94‑1 (MQ=60)
CCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGG < SRR4302532.666080/94‑1 (MQ=60)
CCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGG < SRR4302532.5378401/94‑1 (MQ=60)
CCGATGTCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGA < SRR4302532.3024221/94‑1 (MQ=60)
CGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGCTTTGCCCGGTAACCAATAAAATCCTGTAT > SRR4302532.4650577/1‑94 (MQ=60)
CGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAT < SRR4302532.5316283/94‑1 (MQ=60)
CGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAT > SRR4302532.1087400/1‑94 (MQ=60)
CGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAT > SRR4302532.2499800/1‑94 (MQ=60)
GATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATA > SRR4302532.857461/1‑94 (MQ=60)
ATGGCACCCGTTATTATTTCCCGAAA‑GAGCATATGACTTTTTCTTTACTCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGGTAC < SRR4302532.5667586/94‑1 (MQ=60)
ATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAC < SRR4302532.706535/94‑1 (MQ=60)
ATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAC > SRR4302532.1456831/1‑94 (MQ=60)
ATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAC < SRR4302532.1935689/94‑1 (MQ=60)
TGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACG < SRR4302532.285849/94‑1 (MQ=60)
CAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCT < SRR4302532.2333210/94‑1 (MQ=60)
CAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCT < SRR4302532.2645715/94‑1 (MQ=60)
CAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCT > SRR4302532.5417405/1‑94 (MQ=60)
AACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTT > SRR4302532.5777423/1‑94 (MQ=60)
AACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTT > SRR4302532.5115349/1‑94 (MQ=60)
AACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTT < SRR4302532.4787527/94‑1 (MQ=60)
CCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTT > SRR4302532.2594232/1‑94 (MQ=60)
GTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAA > SRR4302532.3297337/1‑94 (MQ=60)
TATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCT > SRR4302532.3770229/1‑94 (MQ=60)
TATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCT > SRR4302532.643989/1‑94 (MQ=60)
ATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTT < SRR4302532.2084912/94‑1 (MQ=60)
ATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTT < SRR4302532.2003562/94‑1 (MQ=60)
ATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTT < SRR4302532.6255544/94‑1 (MQ=60)
TTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTA < SRR4302532.5041180/94‑1 (MQ=60)
TTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTA < SRR4302532.1093200/94‑1 (MQ=60)
TACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAC < SRR4302532.215368/94‑1 (MQ=60)
ACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACC < SRR4302532.2110155/94‑1 (MQ=60)
GAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCT > SRR4302532.773498/1‑94 (MQ=60)
AAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTT < SRR4302532.1174726/94‑1 (MQ=60)
AAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTT > SRR4302532.3424285/1‑94 (MQ=60)
AAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTA < SRR4302532.3578397/94‑1 (MQ=60)
AGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTAT > SRR4302532.6191869/1‑94 (MQ=60)
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TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTAT > NC_000913/4573097‑4573282
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
