Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,576,170 |
A→G |
R246R (CGT→CGC) |
mcrB ← |
McrB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,576,170 | 0 | A | G | 99.4%
| 592.2
/ ‑4.9
| 167 | R246R (CGT→CGC) | mcrB | McrB |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (117/49); total (118/49) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01 |
Only 100 of 168 total aligned reads displayed.
AAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCA > NC_000913/4576080‑4576258
|
aaaaaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCg > 2:6034886/1‑93 (MQ=255)
aaaaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGa > 1:2396485/1‑93 (MQ=255)
aaaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGAt > 2:316157/1‑93 (MQ=255)
aaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATa > 1:4459793/1‑93 (MQ=255)
aaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATa > 2:6135508/1‑93 (MQ=255)
atatACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAg > 1:156271/1‑93 (MQ=255)
atatACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAg > 2:3074805/1‑93 (MQ=255)
tataCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGc > 1:2926424/1‑93 (MQ=255)
tataCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGc > 1:937302/1‑93 (MQ=255)
tataCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGc > 2:1258026/1‑93 (MQ=255)
taCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGccc > 1:2465989/1‑93 (MQ=255)
taCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGccc < 2:3678709/93‑1 (MQ=255)
taCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGccc > 2:4791972/1‑93 (MQ=255)
aCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCt < 1:5588499/93‑1 (MQ=255)
tttCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCAATCGGGCGATAGCCCTGtat > 2:4752224/1‑93 (MQ=255)
tgtctcTGGCTGCTCTTTAGCGTGCTGACAAAAATTCTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGtat < 1:2857616/91‑1 (MQ=255)
ttCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGtata > 1:2171624/1‑93 (MQ=255)
ttCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGtata > 1:6085957/1‑93 (MQ=255)
tctcTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaa > 2:4527895/1‑93 (MQ=255)
tctcTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaa > 2:5838199/1‑93 (MQ=255)
tctcTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATaa > 1:1138048/1‑93 (MQ=255)
ctctGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaaa > 1:3984815/1‑93 (MQ=255)
ctctGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaaa > 1:5298252/1‑93 (MQ=255)
tctGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaaaa < 1:4417754/93‑1 (MQ=255)
ctGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAAt < 1:1036991/93‑1 (MQ=255)
tGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATc > 2:715728/1‑93 (MQ=255)
tGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATc > 1:898939/1‑93 (MQ=255)
ggCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATcc > 2:1810428/1‑93 (MQ=255)
ggCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATcc < 2:5343937/93‑1 (MQ=255)
ggCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGAAGCCACTCGGGCGATAGCCCTGTATAAAATcc > 1:3497554/1‑93 (MQ=255)
gctgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCt > 2:1763365/1‑93 (MQ=255)
gctgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCt > 2:558145/1‑93 (MQ=255)
ctgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTc > 1:4155922/1‑93 (MQ=255)
ctgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTc < 1:5227596/93‑1 (MQ=255)
tgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATCGCCCTGTATAAAATCCTCa > 2:152139/1‑93 (MQ=255)
tgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCa > 2:500280/1‑93 (MQ=255)
tgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCa > 2:381523/1‑93 (MQ=255)
tgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCa > 1:3162352/1‑93 (MQ=255)
gctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGGTAGCCCTGTATAAAATCCTCAt > 1:1283865/1‑93 (MQ=255)
gctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCAt > 1:461654/1‑93 (MQ=255)
gctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCAt < 2:2995205/93‑1 (MQ=255)
gctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCAt > 1:3816926/1‑93 (MQ=255)
gctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCAt < 1:3532987/93‑1 (MQ=255)
ctctTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATa < 2:2457934/93‑1 (MQ=255)
tctTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAg < 2:3702290/93‑1 (MQ=255)
tAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCtat > 1:4776907/1‑93 (MQ=255)
gCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATaa > 2:5079326/1‑93 (MQ=255)
gCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATaa < 2:1813529/93‑1 (MQ=255)
gCTTGCTGACAAAAATTGTAAAATATGCCGCCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATaa > 2:4411539/1‑93 (MQ=255)
ttGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGa > 2:4977902/1‑93 (MQ=255)
ttGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGa < 2:4287699/93‑1 (MQ=255)
gCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGAtt > 1:4370264/1‑93 (MQ=255)
gCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGAtt > 2:61698/1‑93 (MQ=255)
cTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCtata > 1:3694572/1‑87 (MQ=255)
cTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTg > 2:2609125/1‑93 (MQ=255)
gACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGAt > 1:2821652/1‑93 (MQ=255)
gACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGAt > 1:5012869/1‑93 (MQ=255)
gACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGAt > 1:5665661/1‑93 (MQ=255)
cAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATgg > 1:5789625/1‑93 (MQ=255)
aaaaTTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGaa > 2:762504/1‑93 (MQ=255)
aaTTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACt < 1:2615243/93‑1 (MQ=255)
gTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAAc > 2:2966726/1‑93 (MQ=255)
aaaaTATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCa > 1:2435597/1‑93 (MQ=255)
aaaTATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCat > 1:5054874/1‑93 (MQ=255)
atatGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCatat < 1:1237755/93‑1 (MQ=255)
tatGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATAtt < 2:4303917/93‑1 (MQ=255)
tGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGa < 2:3815103/93‑1 (MQ=255)
tGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGa > 2:3573256/1‑93 (MQ=255)
tGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGa > 2:3513654/1‑93 (MQ=255)
ccGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAcg < 1:3358362/93‑1 (MQ=255)
cGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAcgc > 1:5099821/1‑93 (MQ=255)
cGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAcgc > 2:3186502/1‑93 (MQ=255)
gTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAcgcg > 1:5874458/1‑93 (MQ=255)
tCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGt > 1:198588/1‑93 (MQ=255)
tCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGt < 2:4838089/93‑1 (MQ=255)
cTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGtt > 1:2483148/1‑93 (MQ=255)
cTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGtt > 1:2298092/1‑93 (MQ=255)
cTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGtt < 2:3026970/93‑1 (MQ=255)
ttACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGc < 1:1978903/93‑1 (MQ=255)
tACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCg > 2:4122655/1‑93 (MQ=255)
aCGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCgg > 1:3052915/1‑93 (MQ=255)
gTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAg > 2:3917688/1‑93 (MQ=255)
ggAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCt < 2:5851305/93‑1 (MQ=255)
ggAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCt > 2:458662/1‑93 (MQ=255)
gAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtt > 2:1624246/1‑93 (MQ=255)
aGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtttt > 1:3225996/1‑93 (MQ=255)
aGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtttt > 2:3237522/1‑93 (MQ=255)
aGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCAAATTGCCGCGTGGGGGAGCCtttt > 1:548900/1‑93 (MQ=255)
gCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTtc > 1:3275296/1‑93 (MQ=255)
ccGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTtct > 1:4195099/1‑93 (MQ=255)
gACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTcc > 2:556354/1‑93 (MQ=255)
gACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTcc < 1:2584838/93‑1 (MQ=255)
gACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTcc < 2:2365484/93‑1 (MQ=255)
aCGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCt > 2:4571811/1‑93 (MQ=255)
cGCCATTCGGGCGATGGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTg > 1:2278248/1‑93 (MQ=255)
cGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTg > 1:1027829/1‑93 (MQ=255)
gCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGt > 1:4798128/1‑93 (MQ=255)
ccATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTc > 1:284816/1‑93 (MQ=255)
aTTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAg > 2:3278864/1‑93 (MQ=255)
ttCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGc > 2:1907514/1‑93 (MQ=255)
|
AAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCA > NC_000913/4576080‑4576258
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAG > NC_000913/4576077‑4576256
|
AATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGG > SRR4302532.6312980/1‑94 (MQ=60)
AATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGG < SRR4302532.467060/94‑1 (MQ=60)
AATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGG > SRR4302532.3479936/1‑94 (MQ=60)
ATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGC > SRR4302532.5028447/1‑94 (MQ=60)
ATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCAGAAGCCGACGCCATTCGGGC > SRR4302532.1710510/1‑94 (MQ=60)
ATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCAGAAGCCGACCCCCTTCGGGC > SRR4302532.1710509/1‑94 (MQ=60)
AAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGA > SRR4302532.3416368/1‑94 (MQ=60)
AAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGA > SRR4302532.1366546/1‑94 (MQ=60)
AAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGA > SRR4302532.2476289/1‑94 (MQ=60)
AAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATA > SRR4302532.4614762/1‑94 (MQ=60)
AAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATA > SRR4302532.4611821/1‑94 (MQ=60)
AATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAG > SRR4302532.161469/1‑94 (MQ=60)
ATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGC > SRR4302532.969422/1‑94 (MQ=60)
ATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGC > SRR4302532.3023798/1‑94 (MQ=60)
ATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGC > SRR4302532.2923204/1‑94 (MQ=60)
ATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCC > SRR4302532.2670387/1‑94 (MQ=60)
ATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCC > SRR4302532.2548074/1‑94 (MQ=60)
ACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTG < SRR4302532.5782502/94‑1 (MQ=60)
CTTTTTCACTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGT > SRR4302532.6259980/1‑94 (MQ=60)
TTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTA > SRR4302532.3724146/1‑94 (MQ=60)
TTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATA > SRR4302532.2244222/1‑94 (MQ=60)
TTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATA > SRR4302532.6296094/1‑94 (MQ=60)
TGTCTCTGGCTGCTCTTTAGCGTGCTGACAAAAATTCTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATA < SRR4302532.2953174/94‑1 (MQ=60)
TTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAA > SRR4302532.1175997/1‑94 (MQ=60)
TCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAA > SRR4302532.5481270/1‑94 (MQ=60)
TCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAA > SRR4302532.4119050/1‑94 (MQ=60)
CTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAA > SRR4302532.3140021/1‑94 (MQ=60)
CTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAA > SRR4302532.2885226/1‑94 (MQ=60)
TCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAAT < SRR4302532.4568245/94‑1 (MQ=60)
CTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATC > SRR4302532.929593/1‑94 (MQ=60)
CTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATC < SRR4302532.1071981/94‑1 (MQ=60)
TGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGAAGCCACTCGGGCGATAGCCCTGTATAAAATCC > SRR4302532.3614735/1‑94 (MQ=60)
GCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTC > SRR4302532.4295337/1‑94 (MQ=60)
CTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCA < SRR4302532.5407888/94‑1 (MQ=60)
CTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCA > SRR4302532.3267356/1‑94 (MQ=60)
TGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGGTAGCCCTGTATAAAATCCTCAT > SRR4302532.1326812/1‑94 (MQ=60)
TGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCAT > SRR4302532.3945791/1‑94 (MQ=60)
TGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCAT > SRR4302532.477721/1‑94 (MQ=60)
GCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATA > SRR4302532.5359604/1‑94 (MQ=60)
GCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATA < SRR4302532.3651212/94‑1 (MQ=60)
CTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCT < SRR4302532.5728583/94‑1 (MQ=60)
TTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTAT > SRR4302532.4941410/1‑94 (MQ=60)
CTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGA > SRR4302532.1759522/1‑94 (MQ=60)
TTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGAT < SRR4302532.2457831/94‑1 (MQ=60)
TGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATT > SRR4302532.4518522/1‑94 (MQ=60)
GCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAatccc > SRR4302532.3818614/1‑89 (MQ=60)
TGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGAT > SRR4302532.5863153/1‑94 (MQ=60)
TGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGAT > SRR4302532.5184702/1‑94 (MQ=60)
TGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGAT > SRR4302532.2916071/1‑94 (MQ=60)
ACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGG > SRR4302532.5990930/1‑94 (MQ=60)
ACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGG > SRR4302532.2564748/1‑94 (MQ=60)
AATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTG < SRR4302532.2702751/94‑1 (MQ=60)
GTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACC > SRR4302532.5473857/1‑94 (MQ=60)
GTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACC > SRR4302532.1187181/1‑94 (MQ=60)
TAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCA > SRR4302532.2516580/1‑94 (MQ=60)
TAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCA > SRR4302532.2516581/1‑94 (MQ=60)
AAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCAT > SRR4302532.5228364/1‑94 (MQ=60)
AAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCAT < SRR4302532.443937/94‑1 (MQ=60)
AAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCAT > SRR4302532.2975765/1‑94 (MQ=60)
AATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATAT < SRR4302532.4800674/94‑1 (MQ=60)
ATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATT < SRR4302532.1279158/94‑1 (MQ=60)
ATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATT > SRR4302532.2331238/1‑94 (MQ=60)
ATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGA > SRR4302532.6046531/1‑94 (MQ=60)
TGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAC < SRR4302532.3649354/94‑1 (MQ=60)
CCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGC < SRR4302532.3470545/94‑1 (MQ=60)
CCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGC > SRR4302532.5275157/1‑94 (MQ=60)
CGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCG > SRR4302532.6078002/1‑94 (MQ=60)
CGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCG > SRR4302532.5191433/1‑94 (MQ=60)
GTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGT > SRR4302532.205356/1‑94 (MQ=60)
GCCTTTACGTCGGAAGCCGACGCCATTAGGGCGATAGCCCCGTATAAAAGCCTCATAGCTATAAGATTGATGGAACTTAACCATACTGACGCTT > SRR4302532.1420554/1‑94 (MQ=60)
TCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTT > SRR4302532.2565889/1‑94 (MQ=60)
TCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTT > SRR4302532.2374433/1‑94 (MQ=60)
CTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTG > SRR4302532.4965966/1‑94 (MQ=60)
TTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGC < SRR4302532.4232182/94‑1 (MQ=60)
TTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCG > SRR4302532.103372/1‑94 (MQ=60)
TTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCG < SRR4302532.2044632/94‑1 (MQ=60)
TACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGG > SRR4302532.3153708/1‑94 (MQ=60)
TACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGG < SRR4302532.4091345/94‑1 (MQ=60)
CGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAG < SRR4302532.2242654/94‑1 (MQ=60)
GTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGC < SRR4302532.1120643/94‑1 (MQ=60)
GTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGC > SRR4302532.4536032/1‑94 (MQ=60)
TGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGgaattaaacaacattttagacgggggggggg > SRR4302532.5926962/1‑63 (MQ=60)
CGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCT < SRR4302532.3324925/94‑1 (MQ=60)
CGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCT > SRR4302532.748934/1‑94 (MQ=60)
AAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTT > SRR4302532.3333077/1‑94 (MQ=60)
AAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCAAATTGCCGCGTGGGGGAGCCTTTT > SRR4302532.568045/1‑94 (MQ=60)
AGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTC > SRR4302532.3384214/1‑94 (MQ=60)
AGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTC > SRR4302532.3384213/1‑94 (MQ=60)
GCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCT > SRR4302532.4335884/1‑94 (MQ=60)
GACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCT < SRR4302532.2671234/94‑1 (MQ=60)
ACGCCATTCGGGCGATGGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTG > SRR4302532.2353859/1‑94 (MQ=60)
ACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTG > SRR4302532.1062582/1‑94 (MQ=60)
CGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGT > SRR4302532.4963379/1‑94 (MQ=60)
GCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTC > SRR4302532.294653/1‑94 (MQ=60)
CATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAG < SRR4302532.5792282/94‑1 (MQ=60)
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AATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAG > NC_000913/4576077‑4576256
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
