Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,577,071 |
A→G |
*114Q (TAA→CAA) |
yjiW ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,577,071 | 0 | A | G | 99.5%
| 737.6
/ ‑5.2
| 209 | *114Q (TAA→CAA) | yjiW | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (94/114); total (95/114) |
| Fisher's exact test for biased strand distribution p-value = 4.55e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 |
Only 100 of 225 total aligned reads displayed.
AAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCG > NC_000913/4576981‑4577160
|
aaaaTCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGcg < 2:1670625/93‑1 (MQ=255)
aaaaTCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAAACGGGAGTAAACGCTGTTGcg > 1:1087940/1‑93 (MQ=255)
aaaTCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGGAAACGCTGTTgcgc > 1:5393023/1‑93 (MQ=255)
aTCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGa < 1:3421068/93‑1 (MQ=255)
acAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGAc < 2:4866083/92‑1 (MQ=255)
aGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGGGCGACtt > 1:4675376/1‑93 (MQ=255)
aGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACtt < 1:5140967/93‑1 (MQ=255)
aCTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTTTTGCGCGACTTTc < 1:4843478/93‑1 (MQ=255)
aCTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACtttt > 2:5374535/1‑92 (MQ=255)
aCTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTc < 1:3084810/93‑1 (MQ=255)
aCTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGCGGTAAAAGCTGTTGCGCGACATTc > 2:1815115/1‑93 (MQ=255)
cTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCt > 1:1956165/1‑93 (MQ=255)
cTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCt > 2:4156267/1‑93 (MQ=255)
tGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTg < 1:209597/93‑1 (MQ=255)
ggTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGt > 2:5238530/1‑93 (MQ=255)
ggTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGGGGTTAACCGGGAGGAAAAGCTGTTGCGCGACTTTCTGt > 2:323894/1‑93 (MQ=255)
gTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGAGAGTAAACGCTGTTGCGCGACTTTCTGtt < 2:4273442/93‑1 (MQ=255)
aaTATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGGTCCCGGTGGTTAACCGGGAGGAAACGCCGTTGCGCGACTTTCTGTTTAc > 2:3521822/1‑93 (MQ=255)
atatTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTAcc > 1:4058235/1‑93 (MQ=255)
atatTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTAcc < 1:5268423/93‑1 (MQ=255)
atatTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTAcc > 2:5711354/1‑93 (MQ=255)
tatTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTGACCGGGAGTAAAAGCCGTTTCGCGACTTTTTGTTTAACg > 1:3514737/1‑93 (MQ=255)
tatTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCg > 2:5849284/1‑93 (MQ=255)
atTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTAACgg > 2:3871074/1‑93 (MQ=255)
atTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGGGGGTAACCGGGAGGAAACGCTGGTGCGCGACGTTCTGTTTACCgg > 2:237075/1‑93 (MQ=255)
tttACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAAAGCTGTTGCGCGACTTTCTGTTTACCGGc > 2:3018250/1‑93 (MQ=255)
tACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGGGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTTTGTTTACCGGCaa > 1:5002514/1‑93 (MQ=255)
cTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATc < 2:885080/93‑1 (MQ=255)
cTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATc < 1:6138310/93‑1 (MQ=255)
tGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAAttc > 1:3376789/1‑91 (MQ=255)
tGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCa < 2:2914341/93‑1 (MQ=255)
tGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCa < 1:5727249/93‑1 (MQ=255)
ggggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTcc < 1:2939248/93‑1 (MQ=255)
gggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGCCTTTCTGTTTACCGGCAATCACTCCa > 2:902807/1‑93 (MQ=255)
gAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAAt < 1:2371269/93‑1 (MQ=255)
aaaGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATa < 1:3599628/93‑1 (MQ=255)
aaGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGCCTTTCTGTTTACCGGCAATCACTCCAATaa > 1:298483/1‑93 (MQ=255)
aaGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTTTGTTTACCGGCAATCAATCCAATaa > 1:1468030/1‑93 (MQ=255)
aaGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATaa > 2:2465032/1‑93 (MQ=255)
aaGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATaa < 1:4901117/93‑1 (MQ=255)
aGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATaaa < 2:2258821/93‑1 (MQ=255)
aGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATaaa < 1:2564316/93‑1 (MQ=255)
ttCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGc < 1:1242288/93‑1 (MQ=255)
tCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCCATAAACGcc > 1:5840047/1‑93 (MQ=255)
tCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGcc > 2:3586747/1‑93 (MQ=255)
cTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCt > 1:2176767/1‑93 (MQ=255)
tATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTg > 1:1881239/1‑93 (MQ=255)
aTTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGc < 2:4363637/93‑1 (MQ=255)
aTTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGc < 2:2597133/93‑1 (MQ=255)
aTTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGc > 1:4243976/1‑93 (MQ=255)
aTTGAGTCAGTGGAAGGCTCCCGGGGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGc > 1:1516558/1‑93 (MQ=255)
ttGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCa > 2:402240/1‑93 (MQ=255)
ttGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCa > 1:942427/1‑93 (MQ=255)
tGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCAc < 1:4951362/93‑1 (MQ=255)
tGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCAc < 2:5077812/93‑1 (MQ=255)
gAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCAcc < 1:1430193/93‑1 (MQ=255)
aGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAACCGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCtt < 2:269865/93‑1 (MQ=255)
aGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTGCCGGCAATCACTCCAATAAACGCCTGCACCTGCtt < 1:1615996/93‑1 (MQ=255)
gTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCCCCTGCttt > 2:5363572/1‑93 (MQ=255)
tGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCtttt > 1:3870787/1‑93 (MQ=255)
aaGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGtt < 1:4371810/93‑1 (MQ=255)
ggCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTa < 2:4988357/93‑1 (MQ=255)
ggCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTa > 1:3619010/1‑93 (MQ=255)
ggCTCCCGGTGGTTAACCGGGAGTAAAAGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTa > 2:6042114/1‑93 (MQ=255)
cTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAcg < 2:4687551/93‑1 (MQ=255)
tCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAcgc < 1:5316389/93‑1 (MQ=255)
tCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAcgc > 2:2945488/1‑93 (MQ=255)
tCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAcgc > 1:1746164/1‑93 (MQ=255)
tCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAcgc < 2:771252/93‑1 (MQ=255)
cccGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAcgcg > 2:3817112/1‑93 (MQ=255)
cccGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAcgcg > 2:4507367/1‑93 (MQ=255)
ccGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACgcgc > 2:5596274/1‑93 (MQ=255)
cGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGcc < 2:2794024/93‑1 (MQ=255)
ggtggtTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCg > 1:4030039/1‑93 (MQ=255)
gtggtTAAGCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGa < 1:2791732/93‑1 (MQ=255)
tggtTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGAc < 2:3154001/93‑1 (MQ=255)
ggtTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACa > 1:1834482/1‑93 (MQ=255)
ttAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGt > 1:5546365/1‑93 (MQ=255)
ttAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGt < 1:4505726/93‑1 (MQ=255)
tAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGtt < 1:75708/93‑1 (MQ=255)
aaCCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGttt < 2:4403941/93‑1 (MQ=255)
cGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGca < 2:193093/93‑1 (MQ=255)
gggAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGcac > 2:1895305/1‑93 (MQ=255)
ggAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGcaca < 1:479262/93‑1 (MQ=255)
ggAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGcaca < 2:1471362/93‑1 (MQ=255)
aGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACAcc < 1:4861099/93‑1 (MQ=255)
aGTAAACCCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAATCGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCATAcc < 2:1333969/93‑1 (MQ=255)
gTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCt < 2:5262248/93‑1 (MQ=255)
gTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCt < 1:4919243/93‑1 (MQ=255)
tAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTg < 1:5959537/93‑1 (MQ=255)
aCGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCg > 1:3835744/1‑93 (MQ=255)
aCGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCg > 2:1752071/1‑93 (MQ=255)
cGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGt > 2:272219/1‑93 (MQ=255)
gCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTa < 1:2156440/93‑1 (MQ=255)
gCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTa < 2:3662910/93‑1 (MQ=255)
gCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTa < 1:187432/93‑1 (MQ=255)
gCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTa > 2:118375/1‑93 (MQ=255)
cTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAg > 1:1858099/1‑93 (MQ=255)
tGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAgg > 2:3076167/1‑92 (MQ=255)
tGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGc > 2:5806786/1‑93 (MQ=255)
|
AAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCG > NC_000913/4576981‑4577160
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCGA > NC_000913/4576978‑4577161
|
TGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTG < SRR4302532.3918475/94‑1 (MQ=60)
TGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTG < SRR4302532.4507632/94‑1 (MQ=60)
GCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGC < SRR4302532.599550/94‑1 (MQ=60)
CAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCG < SRR4302532.2165548/94‑1 (MQ=60)
CAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAAACGGGAGTAAACGCTGTTGCG > SRR4302532.1124373/1‑94 (MQ=60)
AAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGGAAACGCTGTTGCGC > SRR4302532.5579868/1‑94 (MQ=60)
ATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGAC < SRR4302532.3535669/94‑1 (MQ=60)
CAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGGGCGACTT > SRR4302532.4834791/1‑94 (MQ=60)
CAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTT < SRR4302532.3092010/94‑1 (MQ=60)
CAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTT > SRR4302532.2432878/1‑94 (MQ=60)
AGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTT < SRR4302532.5317824/94‑1 (MQ=60)
ACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTTTTGCGCGACTTTCT < SRR4302532.5010204/94‑1 (MQ=60)
ACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCT < SRR4302532.1724325/94‑1 (MQ=60)
ACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCT > SRR4302532.2021145/1‑94 (MQ=60)
ACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCT < SRR4302532.3186871/94‑1 (MQ=60)
CTGGTAAATATTTACTGAGGGGGAAATTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTG < SRR4302532.2748407/94‑1 (MQ=60)
CTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGGAAACGCTGTTGCGCGACTTTCTG > SRR4302532.4625080/1‑94 (MQ=60)
TGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGT < SRR4302532.216753/94‑1 (MQ=60)
TGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCCGTGGTTAACCGGGAGGAAACGCTGTTGCGCGACTTTTTGT > SRR4302532.4610346/1‑94 (MQ=60)
GTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTTCCGGTGGTTAACCGGGAGGAAACGCTGTATAGCGACTTTCTGTTT > SRR4302532.1917233/1‑94 (MQ=60)
AAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTAC < SRR4302532.2521207/94‑1 (MQ=60)
AATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACC > SRR4302532.4194671/1‑94 (MQ=60)
ATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTGACCGGGAGTAAAAGCCGTTTCGCGACTTTTTGTTTAACG > SRR4302532.3632414/1‑94 (MQ=60)
ATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCG > SRR4302532.1191159/1‑94 (MQ=60)
ATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCG < SRR4302532.5450096/94‑1 (MQ=60)
TTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGGGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTTTGTTTACCGGCAA > SRR4302532.5173989/1‑94 (MQ=60)
ACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATC > SRR4302532.3532682/1‑94 (MQ=60)
ACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATC > SRR4302532.3993781/1‑94 (MQ=60)
ACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGGAAACGCTGTTACGCGCCTTTCTGTTTACCGGCAATC > SRR4302532.5566505/1‑94 (MQ=60)
CTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATtc > SRR4302532.3489720/1‑92 (MQ=60)
CTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCA < SRR4302532.711389/94‑1 (MQ=60)
CTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCA < SRR4302532.6350066/94‑1 (MQ=60)
CTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGCTGCGCGACTTTCTGTTTACAGGCCATCA > SRR4302532.516065/1‑94 (MQ=60)
CTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGGTAACCGGGAGGAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCA > SRR4302532.5952958/1‑94 (MQ=60)
TGAGGGTGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCAC < SRR4302532.1491275/94‑1 (MQ=60)
TGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCAC < SRR4302532.5926716/94‑1 (MQ=60)
GGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACGTTCTGTTTACCGGCAATCACTCC > SRR4302532.3668768/1‑94 (MQ=60)
GGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCA < SRR4302532.3036866/94‑1 (MQ=60)
GAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATA < SRR4302532.4173200/94‑1 (MQ=60)
GAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATA < SRR4302532.4518902/94‑1 (MQ=60)
GAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATA > SRR4302532.1943198/1‑94 (MQ=60)
GAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATA < SRR4302532.2450325/94‑1 (MQ=60)
AAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGCCTTTCTGTTTACCGGCAATCACTCCAATAA > SRR4302532.308788/1‑94 (MQ=60)
AAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTTTGTTTACCGGCAATCAATCCAATAA > SRR4302532.1517483/1‑94 (MQ=60)
AAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAA < SRR4302532.3719968/94‑1 (MQ=60)
AAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAA > SRR4302532.575866/1‑94 (MQ=60)
AAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAA < SRR4302532.5069533/94‑1 (MQ=60)
AGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAAC < SRR4302532.2649895/94‑1 (MQ=60)
AGTTTCTATTGAGTCAGTGGAAGGCTACCGGTGGTTAACCGGGAGAAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAAC > SRR4302532.4320366/1‑94 (MQ=60)
GTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACG < SRR4302532.1565/94‑1 (MQ=60)
GTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACG < SRR4302532.5086192/94‑1 (MQ=60)
GTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGGAAACGCTGTTGCGCGACTTTCTGTTTACCCGCAATCACTCCAATAAACG > SRR4302532.2624136/1‑94 (MQ=60)
TTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCCATAAACGCC > SRR4302532.6042735/1‑94 (MQ=60)
TTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCC < SRR4302532.1283850/94‑1 (MQ=60)
TCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCT > SRR4302532.2249467/1‑94 (MQ=60)
CTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTG > SRR4302532.1943600/1‑94 (MQ=60)
CTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATAACTCCAATAAACGCCTG > SRR4302532.1943601/1‑94 (MQ=60)
TATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGC > SRR4302532.3062449/1‑94 (MQ=60)
TATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGC > SRR4302532.4386566/1‑94 (MQ=60)
TATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGC < SRR4302532.2215091/94‑1 (MQ=60)
TATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGC < SRR4302532.2229887/94‑1 (MQ=60)
TATTGAGTCAGTGGAAGGCTCCCGGGGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGC > SRR4302532.1567782/1‑94 (MQ=60)
ATTGGGTCAGTGGAAGGCTCCCGGGGGTTAACCGGGAGTAAACGCCGTTGCGCGACTTTCTGTTTACCCGCAATCACTCCAATACACGCCTGCC > SRR4302532.3653534/1‑94 (MQ=60)
ATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCA > SRR4302532.974708/1‑94 (MQ=60)
TGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTcccac > SRR4302532.4602140/1‑89 (MQ=60)
TGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACC < SRR4302532.5121263/94‑1 (MQ=60)
TGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACC < SRR4302532.4902799/94‑1 (MQ=60)
TGAGTCAGTGGAAGGCCCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACC < SRR4302532.5121262/94‑1 (MQ=60)
GAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCT < SRR4302532.1478290/94‑1 (MQ=60)
GTCAGTGGAAGGGTCCCGGTGGTTAACCGGGAGTAAACGCTTTTTTGAGAGTTTCTGTTTACCGGCAATCACcccactaaaagcctctacccgc > SRR4302532.5254005/1‑72 (MQ=48)
GTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAAAGCCTGCACCTGC > SRR4302532.5574029/1‑94 (MQ=60)
GTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGAAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCCGC > SRR4302532.5367049/1‑94 (MQ=60)
TCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCT < SRR4302532.1816601/94‑1 (MQ=60)
TCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCT < SRR4302532.3805452/94‑1 (MQ=60)
AGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTGCCGGCAATCACTCCAATAAACGCCTGCACCTGCTTT < SRR4302532.1670682/94‑1 (MQ=60)
AGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAAAGCCTGCACCTGCCTT > SRR4302532.4036765/1‑94 (MQ=60)
GTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTT > SRR4302532.4001405/1‑94 (MQ=60)
GGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGT < SRR4302532.1413605/94‑1 (MQ=60)
AAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTT < SRR4302532.4520140/94‑1 (MQ=60)
AGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCAGTCCAATAAACGCCTGCACCTGCTTTTGTTTA < SRR4302532.5584145/94‑1 (MQ=60)
AGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTA > SRR4302532.3740141/1‑94 (MQ=60)
GTTCCTGGTGGTTAACCGGGATTAATCGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACG < SRR4302532.6134633/94‑1 (MQ=60)
GCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACG > SRR4302532.473229/1‑94 (MQ=60)
CTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGC > SRR4302532.1804889/1‑94 (MQ=60)
TCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCG < SRR4302532.5500326/94‑1 (MQ=60)
CCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGC < SRR4302532.4035789/94‑1 (MQ=60)
CCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCC > SRR4302532.5019441/1‑94 (MQ=60)
CGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCG > SRR4302532.4165825/1‑94 (MQ=60)
GTGGTTAAGCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGAC < SRR4302532.2885331/94‑1 (MQ=60)
TGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACA > SRR4302532.1895475/1‑94 (MQ=60)
GGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAG < SRR4302532.1926056/94‑1 (MQ=60)
GGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAG < SRR4302532.153997/94‑1 (MQ=60)
GTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGT > SRR4302532.5738865/1‑94 (MQ=60)
TTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTT < SRR4302532.3724749/94‑1 (MQ=60)
TTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTT < SRR4302532.4659567/94‑1 (MQ=60)
TAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTT < SRR4302532.78417/94‑1 (MQ=60)
TAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTT > SRR4302532.3347389/1‑94 (MQ=60)
CCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCA < SRR4302532.5231566/94‑1 (MQ=60)
CGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCAC < SRR4302532.3185547/94‑1 (MQ=60)
CGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCAC < SRR4302532.5497828/94‑1 (MQ=60)
GGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACA > SRR4302532.2058791/1‑94 (MQ=60)
GGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACA < SRR4302532.6238940/94‑1 (MQ=60)
GGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACAC < SRR4302532.495970/94‑1 (MQ=60)
GGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACAC < SRR4302532.5035055/94‑1 (MQ=60)
GGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACAC < SRR4302532.495971/94‑1 (MQ=60)
AGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCT < SRR4302532.5028329/94‑1 (MQ=60)
AGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCT < SRR4302532.5028330/94‑1 (MQ=60)
GTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTG < SRR4302532.5088217/94‑1 (MQ=60)
ATAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTG < SRR4302532.191651/94‑1 (MQ=60)
TAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGG < SRR4302532.6165651/94‑1 (MQ=60)
AAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGC < SRR4302532.2114726/94‑1 (MQ=60)
AAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGC > SRR4302532.823786/1‑94 (MQ=60)
AACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCG > SRR4302532.3965244/1‑94 (MQ=60)
AACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCG > SRR4302532.5166197/1‑94 (MQ=60)
CGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTA > SRR4302532.3005941/1‑94 (MQ=60)
CGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTA < SRR4302532.1654147/94‑1 (MQ=60)
CGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTA < SRR4302532.3703995/94‑1 (MQ=60)
GCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAG < SRR4302532.6089303/94‑1 (MQ=60)
GCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAG < SRR4302532.193743/94‑1 (MQ=60)
GCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAG > SRR4302532.1919696/1‑94 (MQ=60)
GCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAG < SRR4302532.2228524/94‑1 (MQ=60)
TGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCG > SRR4302532.3571582/1‑94 (MQ=60)
GTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCGA > SRR4302532.711427/1‑94 (MQ=60)
GTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCGA > SRR4302532.4666881/1‑94 (MQ=60)
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TGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCGA > NC_000913/4576978‑4577161
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
