Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,577,071 |
A→G |
*114Q (TAA→CAA) |
yjiW ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,577,071 | 0 | A | G | 99.6%
| 866.3
/ NA
| 240 | *114Q (TAA→CAA) | yjiW | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (116/123); minor base T (1/0); total (117/123) |
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 257 total aligned reads displayed.
AAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCG > NC_000913/4576982‑4577160
|
aaaTCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTgcgc > 2:6574755/1‑93 (MQ=255)
aaaTCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTgcgc > 1:3903867/1‑93 (MQ=255)
aTCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGa > 2:1728732/1‑93 (MQ=255)
gACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGGTCCCGGTGGTTAACCGGGAGGAAACGCTGTTGCGCGACttt > 1:1727563/1‑93 (MQ=255)
gACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACttt > 1:5014810/1‑93 (MQ=255)
gACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAAACCAGGGCAAACGCTGTTGCGCGAGttt > 2:3846266/1‑93 (MQ=255)
aCTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTc < 1:3380204/93‑1 (MQ=255)
aCTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTc < 2:6472050/93‑1 (MQ=255)
aCTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTc > 2:3150128/1‑93 (MQ=255)
aCTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTc < 1:5386348/93‑1 (MQ=255)
cTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCt < 2:3605350/93‑1 (MQ=255)
cTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCt < 2:6182160/93‑1 (MQ=255)
tGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTg > 1:1665692/1‑93 (MQ=255)
tGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTg < 2:201169/93‑1 (MQ=255)
gTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTGCCGGTGGGTAACCGGGGGGAAACGCCGCTGCGCGACTTTTTgct > 1:42411/1‑91 (MQ=255)
gTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGtt < 1:6075975/93‑1 (MQ=255)
gTAAATATTTACTGAGGGGGAAAGGTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGtt < 1:6523462/93‑1 (MQ=255)
tAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGttt < 1:123836/93‑1 (MQ=255)
tAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGttt < 2:4072567/93‑1 (MQ=255)
aaTATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTAc < 2:2707768/93‑1 (MQ=255)
aaTATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTAc < 2:3962573/93‑1 (MQ=255)
aaTATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTAc > 1:5616550/1‑93 (MQ=255)
atatTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTAcc < 1:4254176/93‑1 (MQ=255)
tatTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCg > 1:4594237/1‑93 (MQ=255)
tttACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGc < 2:604716/93‑1 (MQ=255)
tttACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGc < 1:5284474/93‑1 (MQ=255)
aCTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTTTGTTTACCGGCAAt > 1:75910/1‑93 (MQ=255)
aCTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAAACGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAAt > 2:2996662/1‑93 (MQ=255)
gggggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTc < 2:1181437/93‑1 (MQ=255)
gggggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTc > 1:791738/1‑93 (MQ=255)
gggggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTc > 2:5356518/1‑93 (MQ=255)
ggggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTcc < 1:6329834/93‑1 (MQ=255)
gggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCa > 1:348624/1‑93 (MQ=255)
gggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCa > 2:5800666/1‑93 (MQ=255)
ggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCaa > 2:2751110/1‑93 (MQ=255)
ggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCaa > 2:2209765/1‑93 (MQ=255)
gAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAAt < 1:5135691/93‑1 (MQ=255)
aaaGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATa > 2:4886687/1‑93 (MQ=255)
aaGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATaa < 1:3767418/93‑1 (MQ=255)
aGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATaaa < 2:322443/93‑1 (MQ=255)
aGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATaaa < 2:3357685/93‑1 (MQ=255)
aGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATaaa > 2:3477045/1‑93 (MQ=255)
gTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAAc < 1:6116731/93‑1 (MQ=255)
gTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAAc < 2:1526063/93‑1 (MQ=255)
tttCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACg < 2:5106470/93‑1 (MQ=255)
ttCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGc < 1:2847154/93‑1 (MQ=255)
ttCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGc < 2:6355306/93‑1 (MQ=255)
tCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGcc < 1:3984292/93‑1 (MQ=255)
cTATTGAGGCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCt > 1:6467732/1‑93 (MQ=255)
tATTGAGTCAGTGGAAGGCTCCCGGTGGTTAAACGGGAGTAAACGCTGTTTCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTg > 1:5756997/1‑93 (MQ=255)
aTTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGGAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGc > 1:5860676/1‑93 (MQ=255)
gAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCAcc < 1:2431592/93‑1 (MQ=255)
aGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCt > 2:5652291/1‑93 (MQ=255)
aGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCt < 1:1457622/93‑1 (MQ=255)
gTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTg > 1:2240458/1‑93 (MQ=255)
gTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTg > 1:2177127/1‑93 (MQ=255)
gTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTg > 1:1801009/1‑93 (MQ=255)
tCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGc > 1:3637182/1‑93 (MQ=255)
cAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCt < 1:4095960/93‑1 (MQ=255)
gTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCttt > 1:4836779/1‑93 (MQ=255)
tGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCtttt > 2:5975743/1‑93 (MQ=255)
tGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCtttt < 2:5168559/93‑1 (MQ=255)
ggAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTg < 1:6264081/93‑1 (MQ=255)
gAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGt > 2:5503508/1‑93 (MQ=255)
gAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGt > 1:5951730/1‑93 (MQ=255)
aGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGttt > 2:267074/1‑93 (MQ=255)
aGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGttt < 1:2574277/93‑1 (MQ=255)
ggCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTa < 2:5979/93‑1 (MQ=255)
ggCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTa > 2:1497938/1‑93 (MQ=255)
gCTCACGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAc < 2:457270/93‑1 (MQ=255)
cTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAcg < 1:4186442/93‑1 (MQ=255)
tCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAcgc > 2:6439041/1‑93 (MQ=255)
tCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAcgc > 2:6261035/1‑93 (MQ=255)
cccGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAcgcg > 1:2043829/1‑93 (MQ=255)
ccGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACgcgc > 1:1976522/1‑93 (MQ=255)
cGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGcc > 1:6576861/1‑93 (MQ=255)
cGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAACAAACGCCTGCACCTGCTTTTGTTTACGCGcc < 2:3275410/93‑1 (MQ=255)
ggtggtTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCg > 2:5873828/1‑93 (MQ=255)
ggtggtTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCg > 2:3787101/1‑93 (MQ=255)
ggtggtTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCg > 2:4964873/1‑93 (MQ=255)
ggtggtTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCg < 2:5309169/93‑1 (MQ=255)
gtggtTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGa < 2:2818169/93‑1 (MQ=255)
ggtTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCTGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACa > 1:3338401/1‑93 (MQ=255)
gtTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAg > 1:3128963/1‑93 (MQ=255)
gtTAACCGGGAGTAAAAGCTGTAGCGCGACTTTCTGTTTACCGGCAATCACTCCACTAACCGCCTGCACCTACTTTTGTTTACGCGCCGACAg < 1:6640822/93‑1 (MQ=255)
ttAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGt < 2:828930/93‑1 (MQ=255)
aCCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTg > 1:6216617/1‑93 (MQ=255)
ccGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGc > 2:4456476/1‑93 (MQ=255)
gggAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGcac > 2:2351044/1‑93 (MQ=255)
gggAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGcac > 1:1268017/1‑93 (MQ=255)
aGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGCTTGCACAcc < 2:1677936/93‑1 (MQ=255)
gTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCt < 1:4745143/93‑1 (MQ=255)
tAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTg > 2:2518753/1‑93 (MQ=255)
aaCGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGc > 2:4206339/1‑93 (MQ=255)
aCGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCg < 1:1441718/93‑1 (MQ=255)
gCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTa > 1:5708542/1‑93 (MQ=255)
cTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAg < 2:5550379/93‑1 (MQ=255)
cTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAg > 1:2456899/1‑93 (MQ=255)
cTGTTGCGCGACTTTCTGTTTACCGGCAATCACTACAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAg > 2:2628364/1‑93 (MQ=255)
tGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGc < 2:4657507/93‑1 (MQ=255)
|
AAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCG > NC_000913/4576982‑4577160
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCGACTG > NC_000913/4576978‑4577164
|
TGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTG < SRR4302547.3885122/94‑1 (MQ=60)
TGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTG > SRR4302547.5827248/1‑94 (MQ=60)
GCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGC < SRR4302547.1040344/94‑1 (MQ=60)
GCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGGAAAAGCTGTTTC > SRR4302547.6550465/1‑94 (MQ=60)
CAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCG < SRR4302547.5052022/94‑1 (MQ=60)
CAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCG < SRR4302547.4072682/94‑1 (MQ=60)
AAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGC > SRR4302547.6429617/1‑94 (MQ=60)
AAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGC > SRR4302547.3983258/1‑94 (MQ=60)
AAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCG < SRR4302547.734211/94‑1 (MQ=60)
AAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCG > SRR4302547.2046304/1‑94 (MQ=60)
TCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACT > SRR4302547.740606/1‑94 (MQ=60)
TCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACT < SRR4302547.6394820/94‑1 (MQ=60)
CAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTT > SRR4302547.4854976/1‑94 (MQ=60)
AGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGGTCCCGGTGGTTAACCGGGAGGAAACGCTGTTGCGCGACTTT > SRR4302547.1761503/1‑94 (MQ=60)
AGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTT < SRR4302547.1415388/94‑1 (MQ=60)
AGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTT > SRR4302547.5118466/1‑94 (MQ=60)
AGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTT > SRR4302547.5872353/1‑94 (MQ=60)
AGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGGAAACGCCGTTGCGCGACTTT > SRR4302547.5940876/1‑94 (MQ=60)
ACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCT < SRR4302547.3448897/94‑1 (MQ=60)
ACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCT < SRR4302547.6116944/94‑1 (MQ=60)
ACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCT < SRR4302547.4408709/94‑1 (MQ=60)
ACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCT < SRR4302547.5497569/94‑1 (MQ=60)
CTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTG > SRR4302547.1698527/1‑94 (MQ=60)
CTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGGTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTG > SRR4302547.366180/1‑94 (MQ=60)
CTGGTAAATATTTACTGAGGGGAAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTG < SRR4302547.2995682/94‑1 (MQ=60)
TGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGT > SRR4302547.1736414/1‑94 (MQ=60)
GGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTT < SRR4302547.3771604/94‑1 (MQ=60)
GTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTT < SRR4302547.6202010/94‑1 (MQ=60)
GTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTT < SRR4302547.1934619/94‑1 (MQ=60)
GTAAATATTTACTGAGGGGGAAAGGTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTT < SRR4302547.6659269/94‑1 (MQ=60)
TAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTA < SRR4302547.6553254/94‑1 (MQ=60)
TAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTA < SRR4302547.126087/94‑1 (MQ=60)
AAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTAC > SRR4302547.5732455/1‑94 (MQ=60)
AAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTAC > SRR4302547.6234287/1‑94 (MQ=60)
ATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCG > SRR4302547.4689300/1‑94 (MQ=60)
ATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCG < SRR4302547.4341225/94‑1 (MQ=60)
TATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGG < SRR4302547.6249863/94‑1 (MQ=60)
ATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGC > SRR4302547.5415933/1‑94 (MQ=60)
TTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCA < SRR4302547.5393474/94‑1 (MQ=60)
TACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTTTGTTTACCGGCAAT > SRR4302547.77333/1‑94 (MQ=60)
ACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATC < SRR4302547.4564411/94‑1 (MQ=60)
CTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCA < SRR4302547.2919345/94‑1 (MQ=60)
CTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCA > SRR4302547.6131073/1‑94 (MQ=60)
GAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACT < SRR4302547.3897871/94‑1 (MQ=60)
AGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTC > SRR4302547.806721/1‑94 (MQ=60)
AGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTC > SRR4302547.6739574/1‑94 (MQ=60)
GGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCC < SRR4302547.806516/94‑1 (MQ=60)
GGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCGATCACTCCA < SRR4302547.6634549/94‑1 (MQ=60)
GGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCA > SRR4302547.355099/1‑94 (MQ=60)
GGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCA < SRR4302547.6461513/94‑1 (MQ=60)
GAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATA < SRR4302547.5241499/94‑1 (MQ=60)
AAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAA < SRR4302547.432279/94‑1 (MQ=60)
AAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAA < SRR4302547.3844253/94‑1 (MQ=60)
GTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACG < SRR4302547.6243611/94‑1 (MQ=60)
GTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACG < SRR4302547.4010999/94‑1 (MQ=60)
TTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCC < SRR4302547.3526842/94‑1 (MQ=60)
TTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCC < SRR4302547.2904047/94‑1 (MQ=60)
TCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCT < SRR4302547.4065305/94‑1 (MQ=60)
TCTATTGAGGCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCT > SRR4302547.6602425/1‑94 (MQ=60)
CTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTG < SRR4302547.5666814/94‑1 (MQ=60)
CTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTG > SRR4302547.3208308/1‑94 (MQ=60)
CTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAAACGGGAGTAAACGCTGTTTCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTG > SRR4302547.5876032/1‑94 (MQ=60)
TATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGC < SRR4302547.2022010/94‑1 (MQ=60)
TATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGC > SRR4302547.1443973/1‑94 (MQ=60)
TATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGGAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGC > SRR4302547.5981961/1‑94 (MQ=60)
TGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACC < SRR4302547.4829741/94‑1 (MQ=60)
TAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCT < SRR4302547.5353578/94‑1 (MQ=60)
GAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCT < SRR4302547.2480781/94‑1 (MQ=60)
AGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTG < SRR4302547.1486750/94‑1 (MQ=60)
AGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTG > SRR4302547.2285646/1‑94 (MQ=60)
AGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTG > SRR4302547.1836632/1‑94 (MQ=60)
AGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTG > SRR4302547.2220723/1‑94 (MQ=60)
AGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTG < SRR4302547.4277122/94‑1 (MQ=60)
GTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGC > SRR4302547.3711360/1‑94 (MQ=60)
TCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCT > SRR4302547.4254087/1‑94 (MQ=60)
CAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTT < SRR4302547.4179255/94‑1 (MQ=60)
CAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTT < SRR4302547.1675111/94‑1 (MQ=60)
CAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTT > SRR4302547.6710422/1‑94 (MQ=60)
AGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTT > SRR4302547.3195216/1‑94 (MQ=60)
AGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTT > SRR4302547.4937042/1‑94 (MQ=60)
GTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTT < SRR4302547.2149718/94‑1 (MQ=60)
GTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTT < SRR4302547.5289247/94‑1 (MQ=60)
TGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTG > SRR4302547.5902126/1‑94 (MQ=60)
TGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTG < SRR4302547.1828783/94‑1 (MQ=60)
TGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTG < SRR4302547.2548209/94‑1 (MQ=60)
GGAAGGGTCCCGGCGGTTAACCGGGAATAAACGCTGTTGCGCGACTTTCTGTTTATCGGCAATCACTCCAATAAACGCCTGCAACTGCTTTTGT > SRR4302547.3173371/1‑94 (MQ=60)
GGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGT < SRR4302547.6394204/94‑1 (MQ=60)
GGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGT > SRR4302547.6075153/1‑94 (MQ=60)
GAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTT < SRR4302547.5047078/94‑1 (MQ=60)
AAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTT < SRR4302547.2184357/94‑1 (MQ=60)
AGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTA < SRR4302547.5626804/94‑1 (MQ=60)
AGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTA < SRR4302547.2626242/94‑1 (MQ=60)
GGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTAC < SRR4302547.157848/94‑1 (MQ=60)
GCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACG < SRR4302547.3419986/94‑1 (MQ=60)
CTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGC > SRR4302547.5007897/1‑94 (MQ=60)
CTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGC > SRR4302547.6031630/1‑94 (MQ=60)
CTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGC < SRR4302547.6392882/94‑1 (MQ=60)
CTCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGC < SRR4302547.4271806/94‑1 (MQ=60)
TCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCG > SRR4302547.2084600/1‑94 (MQ=60)
TCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCG > SRR4302547.1764302/1‑94 (MQ=60)
TCCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCG > SRR4302547.232507/1‑94 (MQ=60)
CCCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGC > SRR4302547.2015766/1‑94 (MQ=60)
CCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCC < SRR4302547.1481016/94‑1 (MQ=60)
CCGGTGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCC > SRR4302547.6713788/1‑94 (MQ=60)
TGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCTGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACA > SRR4302547.3405950/1‑94 (MQ=60)
TGGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACA > SRR4302547.4067464/1‑94 (MQ=60)
GGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAG < SRR4302547.5820455/94‑1 (MQ=60)
GGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAG > SRR4302547.3191052/1‑94 (MQ=60)
GGTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAG < SRR4302547.2612627/94‑1 (MQ=60)
GTTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGT > SRR4302547.5213478/1‑94 (MQ=60)
GTTAACCGGGAGTAAAAGCTGTAGCGCGACTTTCTGTTTACCGGCAATCACTCCACTAACCGCCTGCACCTACTTTTGTTTACGCGCCGACAGT < SRR4302547.6779051/94‑1 (MQ=60)
TTAACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTT < SRR4302547.3998506/94‑1 (MQ=60)
AACCGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTG > SRR4302547.6345720/1‑94 (MQ=60)
AACCGGGAGGAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTG > SRR4302547.2496782/1‑94 (MQ=60)
CGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCAC < SRR4302547.666368/94‑1 (MQ=60)
CGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCAC < SRR4302547.5851811/94‑1 (MQ=60)
CGGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCAC > SRR4302547.1293553/1‑94 (MQ=60)
GGGAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACA > SRR4302547.3722041/1‑94 (MQ=60)
GAGTAAACGCTGTTGCGCGACTTTCTGTTTACCGGAAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACC < SRR4302547.3548678/94‑1 (MQ=60)
GTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTG < SRR4302547.4843479/94‑1 (MQ=60)
GTAAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTG < SRR4302547.2360387/94‑1 (MQ=60)
AAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGC > SRR4302547.4318450/1‑94 (MQ=60)
AAACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGC < SRR4302547.2803062/94‑1 (MQ=60)
ACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAACCGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGT < SRR4302547.4165303/94‑1 (MQ=60)
ACGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGT < SRR4302547.1470545/94‑1 (MQ=60)
CGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTA > SRR4302547.1281433/1‑94 (MQ=60)
CGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTA > SRR4302547.6505467/1‑94 (MQ=60)
CGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTA > SRR4302547.6340257/1‑94 (MQ=60)
CGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTA > SRR4302547.491821/1‑94 (MQ=60)
CGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTA > SRR4302547.2280215/1‑94 (MQ=60)
CGCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTA > SRR4302547.5826453/1‑94 (MQ=60)
GCTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAG > SRR4302547.2506552/1‑94 (MQ=60)
CTGTTGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGC > SRR4302547.1011264/1‑94 (MQ=60)
TGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCGACT > SRR4302547.5581547/1‑94 (MQ=60)
TGCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCGACT > SRR4302547.370525/1‑94 (MQ=60)
GCGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCGACTG < SRR4302547.6593683/94‑1 (MQ=60)
|
TGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTTTGTTTACGCGCCGACAGTTTGCACACCTGGCGTAGCGACTG > NC_000913/4576978‑4577164
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
