Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,576,170 |
A→G |
R246R (CGT→CGC) |
mcrB ← |
McrB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,576,170 | 0 | A | G | 100.0%
| 659.1
/ NA
| 180 | R246R (CGT→CGC) | mcrB | McrB |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (115/65); total (115/65) |
Only 100 of 190 total aligned reads displayed.
AAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAA > NC_000913/4576080‑4576259
|
aaaaaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCg > 1:5366698/1‑93 (MQ=255)
aaaaaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCg > 2:3531202/1‑93 (MQ=255)
aaaaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGa > 1:3908492/1‑93 (MQ=255)
aaaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGAt > 2:5448692/1‑93 (MQ=255)
aaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCTGACGCCATTCGGGCGATa < 2:251729/93‑1 (MQ=255)
aaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATa > 1:3727585/1‑93 (MQ=255)
aaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATa < 1:3600115/93‑1 (MQ=255)
aaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATa < 2:3849138/93‑1 (MQ=255)
atatACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAg > 1:108050/1‑93 (MQ=255)
atatACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAg > 1:6088151/1‑93 (MQ=255)
atatACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAg > 1:5970603/1‑93 (MQ=255)
atatACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAAATGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAg > 2:4673826/1‑93 (MQ=255)
tataCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGc > 2:1436251/1‑93 (MQ=255)
taCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGccc < 1:4859094/93‑1 (MQ=255)
cTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTg > 2:4471618/1‑93 (MQ=255)
tttttCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGt > 1:2460431/1‑93 (MQ=255)
ttttCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGta < 1:4266160/93‑1 (MQ=255)
tttCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGtat < 2:2817844/93‑1 (MQ=255)
tctcTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaa < 1:830539/93‑1 (MQ=255)
tctcTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaa > 1:6609805/1‑93 (MQ=255)
tctcTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaa > 1:2286244/1‑93 (MQ=255)
tctcTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaa > 2:6131946/1‑93 (MQ=255)
tctGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaaaa > 2:2096967/1‑93 (MQ=255)
tctGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaaaa > 1:6494560/1‑93 (MQ=255)
tctGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaaaa > 2:4570397/1‑93 (MQ=255)
tctGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATaaaa > 1:4073085/1‑93 (MQ=255)
tGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATc > 2:5311016/1‑93 (MQ=255)
ggCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATcc < 1:3062267/93‑1 (MQ=255)
gctgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCt < 2:4731133/93‑1 (MQ=255)
gctgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCt > 1:5076254/1‑93 (MQ=255)
gctgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCt > 2:6513860/1‑93 (MQ=255)
gctgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCt < 2:818898/93‑1 (MQ=255)
ctgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTc > 1:1055151/1‑93 (MQ=255)
tgctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCa < 2:3956252/93‑1 (MQ=255)
gctCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGGGAGTGCGCTGTATAAAATCCTcct > 1:2837064/1‑91 (MQ=255)
ctctTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATa > 1:264897/1‑93 (MQ=255)
ctTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGc > 2:2727395/1‑93 (MQ=255)
ctTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGc < 2:3679264/93‑1 (MQ=255)
ctTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGc > 1:5693828/1‑93 (MQ=255)
tAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCtat > 1:2166284/1‑93 (MQ=255)
tAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCtat < 2:4823825/93‑1 (MQ=255)
aGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCtata > 2:1698663/1‑93 (MQ=255)
gCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATaa < 1:345046/93‑1 (MQ=255)
gCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATaa > 2:4129964/1‑93 (MQ=255)
tGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGAt > 2:4941183/1‑93 (MQ=255)
tGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGAt < 1:2976434/93‑1 (MQ=255)
gCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGAtt < 1:6113327/93‑1 (MQ=255)
gCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGAtt < 1:5299429/93‑1 (MQ=255)
cTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTg > 1:4087145/1‑93 (MQ=255)
tGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGa > 1:3289319/1‑93 (MQ=255)
aCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATg > 1:4960475/1‑93 (MQ=255)
aCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATg < 2:6215106/93‑1 (MQ=255)
aaaaTTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGaa < 1:6559712/93‑1 (MQ=255)
aaaTTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAAc > 2:1246409/1‑93 (MQ=255)
aTTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTg < 2:422756/93‑1 (MQ=255)
aTTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTg > 2:1388872/1‑93 (MQ=255)
ttGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGa < 2:5218270/93‑1 (MQ=255)
ttGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGa > 1:1989524/1‑93 (MQ=255)
tGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGaa < 2:1446488/93‑1 (MQ=255)
gTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAAc < 1:2235131/93‑1 (MQ=255)
gTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAAc > 2:6326981/1‑93 (MQ=255)
aaaTATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCat > 1:1305549/1‑93 (MQ=255)
aaaTATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCat > 1:4514966/1‑93 (MQ=255)
aaTAGGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCata < 1:4700122/93‑1 (MQ=255)
tatGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATAtt > 1:2187619/1‑93 (MQ=255)
cGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAcgc < 2:1925765/93‑1 (MQ=255)
cGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAcgc > 1:3781715/1‑93 (MQ=255)
cGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAcgc > 1:6445337/1‑93 (MQ=255)
gTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAcgcg > 1:643838/1‑93 (MQ=255)
tCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGt < 1:279109/93‑1 (MQ=255)
tCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGt < 2:1880822/93‑1 (MQ=255)
cTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGtt < 2:3058279/93‑1 (MQ=255)
tttACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTg > 2:31676/1‑93 (MQ=255)
ttACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGc < 1:5122173/93‑1 (MQ=255)
cGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGa < 1:1475996/93‑1 (MQ=255)
cGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGa < 2:3488906/93‑1 (MQ=255)
gTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAg > 1:4174033/1‑93 (MQ=255)
gTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAg > 1:366919/1‑93 (MQ=255)
gTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAg > 1:5854042/1‑93 (MQ=255)
tCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGc < 1:626789/93‑1 (MQ=255)
cGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGcc < 1:3083611/93‑1 (MQ=255)
ggAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCt < 2:2619070/93‑1 (MQ=255)
gAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtt < 2:434726/93‑1 (MQ=255)
gAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtt > 1:1247449/1‑93 (MQ=255)
gAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtt > 1:1824789/1‑93 (MQ=255)
aGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtttt > 2:2313187/1‑93 (MQ=255)
aGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtttt > 2:6297274/1‑93 (MQ=255)
aGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtttt > 1:4814584/1‑93 (MQ=255)
aGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtttt < 2:5806091/93‑1 (MQ=255)
ccGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTtct > 1:6529879/1‑93 (MQ=255)
aCGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCt > 1:1369637/1‑93 (MQ=255)
aCGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCt < 2:5591997/93‑1 (MQ=255)
aCGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCt > 1:6358944/1‑93 (MQ=255)
ccATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTc > 1:1835674/1‑93 (MQ=255)
cATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCa < 1:972229/93‑1 (MQ=255)
cATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCa > 2:707892/1‑93 (MQ=255)
cATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATGGCCGCGTTGCGGAGCCTTTTCTCCTGTCa < 2:2873113/93‑1 (MQ=255)
aTTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAg < 1:2799326/93‑1 (MQ=255)
aTTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAg > 1:1930386/1‑93 (MQ=255)
tCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCa < 1:5226735/93‑1 (MQ=255)
|
AAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAA > NC_000913/4576080‑4576259
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAAGTA > NC_000913/4576077‑4576262
|
AATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGG > SRR4302547.671782/1‑94 (MQ=60)
ATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGC > SRR4302547.3101494/1‑94 (MQ=60)
TAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCG > SRR4302547.5477441/1‑94 (MQ=60)
TAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCG < SRR4302547.1538190/94‑1 (MQ=60)
AAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGA > SRR4302547.3987979/1‑94 (MQ=60)
AAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGA > SRR4302547.5161309/1‑94 (MQ=60)
AAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATA > SRR4302547.3803681/1‑94 (MQ=60)
AAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATA > SRR4302547.5924477/1‑94 (MQ=60)
AAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATA > SRR4302547.1691178/1‑94 (MQ=60)
AAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATA > SRR4302547.1451798/1‑94 (MQ=60)
AATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAG > SRR4302547.110024/1‑94 (MQ=60)
AATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAG < SRR4302547.3673527/94‑1 (MQ=60)
AATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAG > SRR4302547.6094434/1‑94 (MQ=60)
AATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAG > SRR4302547.6214444/1‑94 (MQ=60)
AATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAG > SRR4302547.6487950/1‑94 (MQ=60)
TACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCT < SRR4302547.4959768/94‑1 (MQ=60)
CTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGT > SRR4302547.2510162/1‑94 (MQ=60)
CTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGT > SRR4302547.235694/1‑94 (MQ=60)
TTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTA < SRR4302547.620701/94‑1 (MQ=60)
TTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTAT < SRR4302547.4353587/94‑1 (MQ=60)
TTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAA > SRR4302547.3735544/1‑94 (MQ=60)
TTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAA > SRR4302547.6747393/1‑94 (MQ=60)
TTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAA > SRR4302547.2332531/1‑94 (MQ=60)
TCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAA > SRR4302547.5758922/1‑94 (MQ=60)
TCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAA < SRR4302547.846394/94‑1 (MQ=60)
CTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAA > SRR4302547.4155831/1‑94 (MQ=60)
CTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAA > SRR4302547.6629755/1‑94 (MQ=60)
CTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAACATC > SRR4302547.2851550/1‑94 (MQ=60)
CTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATC > SRR4302547.6315345/1‑94 (MQ=60)
GGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCT > SRR4302547.5180973/1‑94 (MQ=60)
GGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCT < SRR4302547.3123169/94‑1 (MQ=60)
GCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTC > SRR4302547.1076132/1‑94 (MQ=60)
TGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGGGAGTGCGCTGTATAAAATCCTCCT > SRR4302547.2893773/1‑94 (MQ=60)
TGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCAT > SRR4302547.6683645/1‑94 (MQ=60)
TGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCAT > SRR4302547.3453434/1‑94 (MQ=60)
GCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATA > SRR4302547.1276173/1‑94 (MQ=60)
GCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATA > SRR4302547.3147938/1‑94 (MQ=60)
GCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATA < SRR4302547.5436700/94‑1 (MQ=60)
GCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATA > SRR4302547.269850/1‑94 (MQ=60)
CTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAG > SRR4302547.653206/1‑94 (MQ=60)
TCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGC > SRR4302547.5811427/1‑94 (MQ=60)
CTTTTGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCT > SRR4302547.6174868/1‑94 (MQ=60)
CTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCT > SRR4302547.2637854/1‑94 (MQ=60)
TTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTA > SRR4302547.6089180/1‑94 (MQ=60)
TTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGTGATAGCCCTGTATAAAATCCTCATAGCTAT < SRR4302547.4001600/94‑1 (MQ=60)
TTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTAT > SRR4302547.2209607/1‑94 (MQ=60)
TTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTAT < SRR4302547.3776186/94‑1 (MQ=60)
GCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAG < SRR4302547.351454/94‑1 (MQ=60)
GCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAG > SRR4302547.3819367/1‑94 (MQ=60)
CTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGA > SRR4302547.3912406/1‑94 (MQ=60)
TTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGAT < SRR4302547.50435/94‑1 (MQ=60)
TTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGAT < SRR4302547.193260/94‑1 (MQ=60)
TGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATT < SRR4302547.3035655/94‑1 (MQ=60)
GCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTG > SRR4302547.2208113/1‑94 (MQ=60)
GCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTG < SRR4302547.5408774/94‑1 (MQ=60)
GCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTG < SRR4302547.6240138/94‑1 (MQ=60)
GCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTG > SRR4302547.4170234/1‑94 (MQ=60)
GCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTG > SRR4302547.6644129/1‑94 (MQ=60)
CTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGA > SRR4302547.3355348/1‑94 (MQ=60)
TGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGAT < SRR4302547.6726444/94‑1 (MQ=60)
GACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATG > SRR4302547.5063120/1‑94 (MQ=60)
ACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGG < SRR4302547.4875667/94‑1 (MQ=60)
AAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCGCTGTATAAAATTCTCATAGCTATAAGATTGATGGAA > SRR4302547.1345096/1‑94 (MQ=60)
AAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAAC < SRR4302547.6696303/94‑1 (MQ=60)
ATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGA > SRR4302547.2029034/1‑94 (MQ=60)
GTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACC < SRR4302547.2280194/94‑1 (MQ=60)
AAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCAT > SRR4302547.4608250/1‑94 (MQ=60)
AAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCAT > SRR4302547.1331805/1‑94 (MQ=60)
AAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATA > SRR4302547.1197156/1‑94 (MQ=60)
AATAGGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATAT < SRR4302547.4797466/94‑1 (MQ=60)
ATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATT > SRR4302547.2231493/1‑94 (MQ=60)
TATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTG < SRR4302547.2023490/94‑1 (MQ=60)
ATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGA < SRR4302547.4259429/94‑1 (MQ=60)
GCCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACG < SRR4302547.2863216/94‑1 (MQ=60)
CCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGC > SRR4302547.6579633/1‑94 (MQ=60)
CCGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGC > SRR4302547.3858821/1‑94 (MQ=60)
CGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCG > SRR4302547.655710/1‑94 (MQ=60)
CGTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCG > SRR4302547.295697/1‑94 (MQ=60)
GTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGT > SRR4302547.974708/1‑94 (MQ=60)
CTCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGT < SRR4302547.2245569/94‑1 (MQ=60)
TCTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTT < SRR4302547.284313/94‑1 (MQ=60)
CTTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTG > SRR4302547.2765832/1‑94 (MQ=60)
TTTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGC < SRR4302547.780024/94‑1 (MQ=60)
TTACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCG < SRR4302547.5227717/94‑1 (MQ=60)
TACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGG > SRR4302547.4477201/1‑94 (MQ=60)
TACGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGG > SRR4302547.4639070/1‑94 (MQ=60)
CGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAG < SRR4302547.1505480/94‑1 (MQ=60)
CGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAG > SRR4302547.373723/1‑94 (MQ=60)
CGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAG > SRR4302547.5975162/1‑94 (MQ=60)
CGTCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAG > SRR4302547.4259065/1‑94 (MQ=60)
TCGGAGGCCGACTCCAGCCGGTCGATAGCCGTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGATCC < SRR4302547.3551821/94‑1 (MQ=60)
TCGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCC < SRR4302547.638359/94‑1 (MQ=60)
CGGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCT < SRR4302547.3144824/94‑1 (MQ=60)
GGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTT > SRR4302547.1860866/1‑94 (MQ=60)
GGAAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTT > SRR4302547.1272626/1‑94 (MQ=60)
AAGCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTT > SRR4302547.4914361/1‑94 (MQ=60)
GCCGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCT > SRR4302547.6665790/1‑94 (MQ=60)
CGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCC > SRR4302547.526768/1‑94 (MQ=60)
CGACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCC > SRR4302547.4947454/1‑94 (MQ=60)
GACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCT > SRR4302547.1397119/1‑94 (MQ=60)
GACGCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCT > SRR4302547.6491565/1‑94 (MQ=60)
GCCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTC > SRR4302547.1871964/1‑94 (MQ=60)
CCATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCA < SRR4302547.1870183/94‑1 (MQ=60)
CATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAG < SRR4302547.991126/94‑1 (MQ=60)
CATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAG > SRR4302547.4169450/1‑94 (MQ=60)
CATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAG > SRR4302547.2285225/1‑94 (MQ=60)
CATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAG > SRR4302547.1968655/1‑94 (MQ=60)
ATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGC > SRR4302547.5201746/1‑94 (MQ=60)
ATTCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGC < SRR4302547.2855377/94‑1 (MQ=60)
TCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGTGCCTTTTCTCCTGTCAGCAA < SRR4302547.6624270/94‑1 (MQ=60)
TCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAA < SRR4302547.5334319/94‑1 (MQ=60)
TCGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAA > SRR4302547.3099784/1‑94 (MQ=60)
CGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAAG > SRR4302547.1650264/1‑94 (MQ=60)
CGGGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAAG > SRR4302547.1587737/1‑94 (MQ=60)
GGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAAGTA > SRR4302547.574410/1‑94 (MQ=60)
GGCGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAAGTA < SRR4302547.3999360/94‑1 (MQ=60)
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AATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAAGTA > NC_000913/4576077‑4576262
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
