Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAGCGCATCGGC  >  NC_000913/1128920‑1129105
                                                                                             |                                                                                            
TGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCG                                                                                              <  SRR4302532.3690956/94‑1 (MQ=60)
TGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCG                                                                                              <  SRR4302532.1778371/94‑1 (MQ=60)
TGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCAGTACCGTTTTGAGATCGTTAAGCG                                                                                              >  SRR4302532.3619472/1‑94 (MQ=60)
   TCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAG                                                                                           >  SRR4302532.3041995/1‑94 (MQ=60)
    CTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGC                                                                                          >  SRR4302532.2264015/1‑94 (MQ=60)
    CTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGC                                                                                          >  SRR4302532.396350/1‑94 (MQ=60)
    CTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGC                                                                                          >  SRR4302532.1824326/1‑94 (MQ=60)
     TGTAATCCATTGGAACTGGCTGCCGTTGATGTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCG                                                                                         >  SRR4302532.3180193/1‑94 (MQ=60)
     TGTAATCCATTGCAGCTGCCTGCCGTTGATCTGCCCCATAGAGAGATGTCGCTTCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCT                                                                                         <  SRR4302532.583121/94‑1 (MQ=60)
     TGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCG                                                                                         >  SRR4302532.2542416/1‑94 (MQ=60)
     TGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCG                                                                                         >  SRR4302532.921764/1‑94 (MQ=60)
       TAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGA                                                                                       >  SRR4302532.6084455/1‑94 (MQ=60)
         ATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACA                                                                                     >  SRR4302532.4761991/1‑94 (MQ=60)
         ATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACA                                                                                     >  SRR4302532.4585662/1‑94 (MQ=60)
           CCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATC                                                                                   <  SRR4302532.959153/94‑1 (MQ=60)
            CATTGCAACTGGCTGCCGTTGATCTGCTCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACATCGGACATCT                                                                                  >  SRR4302532.5686740/1‑94 (MQ=60)
            CATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCT                                                                                  <  SRR4302532.917300/94‑1 (MQ=60)
            CATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCT                                                                                  >  SRR4302532.4398846/1‑94 (MQ=60)
              TTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGG                                                                                <  SRR4302532.4794618/94‑1 (MQ=60)
               TGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGT                                                                               <  SRR4302532.178590/94‑1 (MQ=60)
               TGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGT                                                                               <  SRR4302532.1249988/94‑1 (MQ=60)
                GCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTC                                                                              <  SRR4302532.2399705/94‑1 (MQ=60)
                 ccaatgggtgccggtggtctaccccataaaggggTGTTGCTGCTCTTGATCCATTTCCATTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCG                                                                             <  SRR4302532.4937186/60‑1 (MQ=60)
                 CAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCG                                                                             <  SRR4302532.1833218/94‑1 (MQ=60)
                  AACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGA                                                                            >  SRR4302532.2691788/1‑94 (MQ=60)
                   ACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAG                                                                           >  SRR4302532.683667/1‑94 (MQ=60)
                   ACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAG                                                                           <  SRR4302532.1074366/94‑1 (MQ=60)
                   ACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAG                                                                           <  SRR4302532.2201116/94‑1 (MQ=60)
                    CTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGG                                                                          <  SRR4302532.5897546/94‑1 (MQ=60)
                    CTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGG                                                                          <  SRR4302532.6173346/94‑1 (MQ=60)
                    CTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGG                                                                          <  SRR4302532.6173347/94‑1 (MQ=60)
                     TGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGA                                                                         <  SRR4302532.4598788/94‑1 (MQ=60)
                     TGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGA                                                                         >  SRR4302532.6094365/1‑94 (MQ=60)
                         TGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTC                                                                     >  SRR4302532.3899429/1‑94 (MQ=60)
                         TGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTC                                                                     >  SRR4302532.1882540/1‑94 (MQ=60)
                          GCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCT                                                                    <  SRR4302532.5153420/94‑1 (MQ=60)
                            CGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGC                                                                  >  SRR4302532.1975004/1‑94 (MQ=60)
                             GTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCA                                                                 >  SRR4302532.4653934/1‑94 (MQ=60)
                              TTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAA                                                                >  SRR4302532.1189595/1‑94 (MQ=60)
                               TGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAG                                                               <  SRR4302532.5210876/94‑1 (MQ=60)
                               TGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAG                                                               <  SRR4302532.5479272/94‑1 (MQ=60)
                                GATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGA                                                              >  SRR4302532.1054446/1‑94 (MQ=60)
                                 ATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGAC                                                             >  SRR4302532.1193230/1‑94 (MQ=60)
                                 ATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGAC                                                             <  SRR4302532.2164714/94‑1 (MQ=60)
                                 ATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGAC                                                             <  SRR4302532.5022553/94‑1 (MQ=60)
                                   CTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGT                                                           >  SRR4302532.5282154/1‑94 (MQ=60)
                                        CCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAT                                                      <  SRR4302532.5973261/94‑1 (MQ=60)
                                         CATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATA                                                     >  SRR4302532.3668041/1‑94 (MQ=60)
                                          ATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATAC                                                    <  SRR4302532.3417257/94‑1 (MQ=60)
                                            AGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGA                                                  >  SRR4302532.2392288/1‑94 (MQ=60)
                                            AGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGA                                                  >  SRR4302532.757466/1‑94 (MQ=60)
                                               GAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCA                                               <  SRR4302532.3548844/94‑1 (MQ=60)
                                                AGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAG                                              <  SRR4302532.434537/94‑1 (MQ=60)
                                                  ATGTTGCTGCTCTTGATCCATTACCGTTTTTAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTT                                            >  SRR4302532.948214/1‑94 (MQ=60)
                                                   TGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTA                                           >  SRR4302532.5970864/1‑94 (MQ=60)
                                                   TGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTA                                           >  SRR4302532.3435529/1‑94 (MQ=60)
                                                   TGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTA                                           <  SRR4302532.3189965/94‑1 (MQ=60)
                                                   TGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTCAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCATTTA                                           <  SRR4302532.1764464/94‑1 (MQ=60)
                                                     TTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACT                                         >  SRR4302532.6183052/1‑94 (MQ=60)
                                                      TGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTC                                        >  SRR4302532.1717226/1‑94 (MQ=60)
                                                       GCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCT                                       <  SRR4302532.2011216/94‑1 (MQ=60)
                                                       GCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCT                                       <  SRR4302532.2011217/94‑1 (MQ=60)
                                                        CTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTG                                      >  SRR4302532.3266076/1‑94 (MQ=60)
                                                          GCTCTTGATCCATTGCCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCA                                    <  SRR4302532.3837992/94‑1 (MQ=60)
                                                          GCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCA                                    <  SRR4302532.1231781/94‑1 (MQ=60)
                                                           CTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAA                                   <  SRR4302532.1519537/94‑1 (MQ=60)
                                                           CTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAA                                   <  SRR4302532.1519536/94‑1 (MQ=60)
                                                            TCTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAG                                  <  SRR4302532.1630086/94‑1 (MQ=60)
                                                            TCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAG                                  <  SRR4302532.6004107/94‑1 (MQ=60)
                                                            TCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAG                                  <  SRR4302532.2122975/94‑1 (MQ=60)
                                                             CTTGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGT                                 <  SRR4302532.3796594/94‑1 (MQ=60)
                                                               TGATCCATTACCGTTTTGAGATCGTTAAGCGCAGCCGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCT                               >  SRR4302532.4106072/1‑94 (MQ=60)
                                                                GATCCATTACCGTTTTGAGATCTTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTT                              <  SRR4302532.1471898/94‑1 (MQ=60)
                                                                GATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTT                              >  SRR4302532.2291713/1‑94 (MQ=60)
                                                                 ATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTG                             <  SRR4302532.4876911/94‑1 (MQ=60)
                                                                 ATCCATTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTG                             >  SRR4302532.5427958/1‑94 (MQ=60)
                                                                   CCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCT                           >  SRR4302532.3875154/1‑94 (MQ=60)
                                                                   CCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCT                           <  SRR4302532.2424509/94‑1 (MQ=60)
                                                                    CATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTG                          <  SRR4302532.3518114/94‑1 (MQ=60)
                                                                      TTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCG                        >  SRR4302532.5130884/1‑94 (MQ=60)
                                                                      TTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCG                        <  SRR4302532.5402394/94‑1 (MQ=60)
                                                                      TTACCGTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGAG                        >  SRR4302532.2243416/1‑94 (MQ=60)
                                                                      TTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCG                        <  SRR4302532.1552520/94‑1 (MQ=60)
                                                                      TTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCG                        >  SRR4302532.3104697/1‑94 (MQ=60)
                                                                           GTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCG                   >  SRR4302532.4504588/1‑94 (MQ=60)
                                                                           GTTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCG                   >  SRR4302532.4504587/1‑94 (MQ=60)
                                                                            TTTTGAGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGT                  >  SRR4302532.90074/1‑94 (MQ=60)
                                                                              TTGGGATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTG                <  SRR4302532.1463072/94‑1 (MQ=60)
                                                                              TTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTG                <  SRR4302532.884058/94‑1 (MQ=60)
                                                                                  GATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCA            >  SRR4302532.3516616/1‑94 (MQ=60)
                                                                                   ATCGTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAG           <  SRR4302532.5568512/94‑1 (MQ=60)
                                                                                     CGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAGCG         >  SRR4302532.5554077/1‑94 (MQ=60)
                                                                                      GTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATGAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAGCGC        >  SRR4302532.4077693/1‑94 (MQ=60)
                                                                                      GTTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAGCGC        >  SRR4302532.1724530/1‑94 (MQ=60)
                                                                                       TTAAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAGCGCA       <  SRR4302532.3553008/94‑1 (MQ=60)
                                                                                         AAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAGCGCATC     >  SRR4302532.2965768/1‑94 (MQ=60)
                                                                                         AAGCGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAGCGCATC     <  SRR4302532.1977096/94‑1 (MQ=60)
                                                                                          AGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAGCGCATCG    <  SRR4302532.1890618/94‑1 (MQ=60)
                                                                                            CGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAGCGCATCGGC  >  SRR4302532.4036105/1‑94 (MQ=60)
                                                                                            CGCAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAGCGCATCGGC  >  SRR4302532.2844207/1‑94 (MQ=60)
                                                                                             |                                                                                            
TGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTGCTGCTCTTGATCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCATACGATCAGTTACTCTGCAAGTCTTGCTGCGCTTCGTTGATCAGCGCATCGGC  >  NC_000913/1128920‑1129105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑