Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGCGCCAATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAAAATCGCAACA  >  NC_000913/1232068‑1232252
                                                                                            |                                                                                            
CGCGCCAATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGC                                                                                             <  SRR4302532.1015749/94‑1 (MQ=60)
CGCGCCAATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAAC                                                                                             >  SRR4302532.5959058/1‑94 (MQ=60)
  CGCCAATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAAGATCACATGCTGGAGCCA                                                                                           >  SRR4302532.2970907/1‑94 (MQ=60)
  CGCCAATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCA                                                                                           >  SRR4302532.6349591/1‑94 (MQ=60)
  CGCCAATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCA                                                                                           >  SRR4302532.6349592/1‑94 (MQ=60)
  CGCCAATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCA                                                                                           <  SRR4302532.5481135/94‑1 (MQ=60)
  CGCCAATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCA                                                                                           >  SRR4302532.2283428/1‑94 (MQ=60)
  CGCCAATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCA                                                                                           >  SRR4302532.2256492/1‑94 (MQ=60)
     CAATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAG                                                                                        >  SRR4302532.4876220/1‑94 (MQ=60)
       ATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCG                                                                                      <  SRR4302532.4029278/94‑1 (MQ=60)
       ATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCG                                                                                      >  SRR4302532.6215959/1‑94 (MQ=60)
        TCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGC                                                                                     <  SRR4302532.3241624/94‑1 (MQ=60)
          AGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCG                                                                                   >  SRR4302532.4303087/1‑94 (MQ=60)
           GCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGT                                                                                  <  SRR4302532.108321/94‑1 (MQ=60)
            CGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTC                                                                                 >  SRR4302532.2528835/1‑94 (MQ=60)
             GCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCA                                                                                >  SRR4302532.2905227/1‑94 (MQ=60)
               AGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGT                                                                              <  SRR4302532.3431715/94‑1 (MQ=60)
                GCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTT                                                                             >  SRR4302532.6047011/1‑94 (MQ=60)
                GCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTT                                                                             >  SRR4302532.692398/1‑94 (MQ=60)
                  ACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCC                                                                           <  SRR4302532.962685/94‑1 (MQ=60)
                   CCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCA                                                                          <  SRR4302532.2921121/94‑1 (MQ=60)
                   CCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCA                                                                          >  SRR4302532.2651247/1‑94 (MQ=60)
                   CCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCA                                                                          >  SRR4302532.4442070/1‑94 (MQ=60)
                     CAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGT                                                                        >  SRR4302532.5963906/1‑94 (MQ=60)
                     CAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGT                                                                        <  SRR4302532.2788018/94‑1 (MQ=60)
                     CAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGT                                                                        >  SRR4302532.462998/1‑94 (MQ=60)
                     CAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCATCAGTTCCAGT                                                                        >  SRR4302532.4291397/1‑94 (MQ=60)
                      AGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTG                                                                       <  SRR4302532.3464640/94‑1 (MQ=60)
                       GAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGC                                                                      <  SRR4302532.2129577/94‑1 (MQ=60)
                          CGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAG                                                                   >  SRR4302532.1758198/1‑94 (MQ=60)
                            CCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAG                                                                 <  SRR4302532.5846259/94‑1 (MQ=60)
                            CCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAG                                                                 >  SRR4302532.2421116/1‑94 (MQ=60)
                              GAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCA                                                               >  SRR4302532.6280110/1‑94 (MQ=60)
                              GAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCA                                                               <  SRR4302532.5802420/94‑1 (MQ=60)
                              GAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCA                                                               <  SRR4302532.3895578/94‑1 (MQ=60)
                               AATAACGCGCAGCGTTCATAAATACAGAGCAAGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAATTCCAGTGCCAGAGCAG                                                              >  SRR4302532.3345615/1‑94 (MQ=60)
                                 TAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTA                                                            >  SRR4302532.5070854/1‑94 (MQ=60)
                                  AACGCGCAGCGGTAATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAA                                                           >  SRR4302532.1969289/1‑94 (MQ=60)
                                   ACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAA                                                          <  SRR4302532.2904990/94‑1 (MQ=60)
                                   ACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCATTTCCAGTGCCAGAGCAGTAAA                                                          >  SRR4302532.594880/1‑94 (MQ=60)
                                     GCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACG                                                        <  SRR4302532.769478/94‑1 (MQ=60)
                                     GCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACG                                                        <  SRR4302532.6336787/94‑1 (MQ=60)
                                       GCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCC                                                      <  SRR4302532.4804162/94‑1 (MQ=60)
                                        CAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCA                                                     <  SRR4302532.405053/94‑1 (MQ=60)
                                          GCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACCGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATC                                                   >  SRR4302532.1386328/1‑94 (MQ=60)
                                          GCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATC                                                   >  SRR4302532.1386327/1‑94 (MQ=60)
                                            GTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAA                                                 >  SRR4302532.6038242/1‑94 (MQ=60)
                                            GTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGCGCCAGAGCAGTAAACGCCATCAA                                                 >  SRR4302532.4626572/1‑94 (MQ=60)
                                              TCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACA                                               <  SRR4302532.1731815/94‑1 (MQ=60)
                                              TCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACA                                               <  SRR4302532.3849472/94‑1 (MQ=60)
                                               CATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAG                                              <  SRR4302532.795463/94‑1 (MQ=60)
                                                  AAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCA                                           <  SRR4302532.1630266/94‑1 (MQ=60)
                                                   AATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCAC                                          <  SRR4302532.594683/94‑1 (MQ=60)
                                                     TACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGC                                        <  SRR4302532.265566/94‑1 (MQ=60)
                                                     TACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACAC                                        >  SRR4302532.6042724/1‑94 (MQ=60)
                                                       CAGAGCACGCAAGGGTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGGAAACACCATCAACAGCCACGCGC                                      >  SRR4302532.2802545/1‑94 (MQ=60)
                                                         GAGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCC                                    >  SRR4302532.102357/1‑94 (MQ=60)
                                                          AGCACGCAAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCC                                   >  SRR4302532.5415312/1‑94 (MQ=60)
                                                          AGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCC                                   <  SRR4302532.2005429/94‑1 (MQ=60)
                                                           GCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCG                                  <  SRR4302532.816711/94‑1 (MQ=60)
                                                             ACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGC                                >  SRR4302532.5191834/1‑94 (MQ=60)
                                                                 AAGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTG                            >  SRR4302532.1105379/1‑94 (MQ=60)
                                                                 AAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTG                            >  SRR4302532.4418744/1‑94 (MQ=60)
                                                                  AGGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGT                           >  SRR4302532.3474564/1‑94 (MQ=60)
                                                                   GGTTTCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTG                          <  SRR4302532.3294961/94‑1 (MQ=60)
                                                                     TTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAA                        >  SRR4302532.668133/1‑94 (MQ=60)
                                                                     TTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAA                        <  SRR4302532.964040/94‑1 (MQ=60)
                                                                       TCAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACA                      >  SRR4302532.3437163/1‑94 (MQ=60)
                                                                       TCAGTAACATCACATGCTGGACCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACA                      <  SRR4302532.506917/94‑1 (MQ=60)
                                                                        CAGTAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACAT                     <  SRR4302532.5268655/94‑1 (MQ=60)
                                                                        CAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACAT                     >  SRR4302532.2067499/1‑94 (MQ=60)
                                                                        CAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACAT                     >  SRR4302532.1326137/1‑94 (MQ=60)
                                                                         AGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATT                    >  SRR4302532.1930433/1‑94 (MQ=60)
                                                                         AGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATT                    >  SRR4302532.4457918/1‑94 (MQ=60)
                                                                          GTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTG                   <  SRR4302532.996791/94‑1 (MQ=60)
                                                                          GTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTG                   <  SRR4302532.3954347/94‑1 (MQ=60)
                                                                           TAACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGG                  >  SRR4302532.5587622/1‑94 (MQ=60)
                                                                             ACATCACATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTT                >  SRR4302532.2855206/1‑94 (MQ=60)
                                                                             ACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTT                <  SRR4302532.5943834/94‑1 (MQ=60)
                                                                              CATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTC               >  SRR4302532.5733667/1‑94 (MQ=60)
                                                                                 CACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAA            <  SRR4302532.3216480/94‑1 (MQ=60)
                                                                                   CATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAAAA          >  SRR4302532.4035830/1‑94 (MQ=60)
                                                                                   CATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAAAA          >  SRR4302532.2961217/1‑94 (MQ=60)
                                                                                   CATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGAAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAAAA          <  SRR4302532.5866094/94‑1 (MQ=60)
                                                                                    ATGCTGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAAAAT         <  SRR4302532.6005666/94‑1 (MQ=60)
                                                                                    ATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATGGGTGCAAAAAC         >  SRR4302532.4924667/1‑94 (MQ=60)
                                                                                      GCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAAAATCG       >  SRR4302532.5032036/1‑94 (MQ=60)
                                                                                        TGGAGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAAAATCGCA     >  SRR4302532.2680755/1‑94 (MQ=60)
                                                                                           AGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAAAATCGCAACA  >  SRR4302532.3976691/1‑94 (MQ=60)
                                                                                           AGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAAAATCGCAACA  <  SRR4302532.2858378/94‑1 (MQ=60)
                                                                                           AGCCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAAAATCGCAACA  >  SRR4302532.1184280/1‑94 (MQ=60)
                                                                                            |                                                                                            
CGCGCCAATCAGCGCAGCACCCAGAACGCCGAATAACGCGCAGCGTTCATAAATACAGAGCACGCAAGGTTTCAGTAACATCACATGCTGGAACCACAGCGCCGTCAGTTCCAGTGCCAGAGCAGTAAACGCCATCAACAGCCACGCGCCCCGGCCTTGTGAACATTGGTTCAAAAATCGCAACA  >  NC_000913/1232068‑1232252

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑