Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCA  >  NC_000913/1290211‑1290396
                                                                                             |                                                                                            
CCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCG                                                                                              >  SRR4302532.6196145/1‑94 (MQ=60)
CCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCA                                                                                              >  SRR4302532.5514852/1‑94 (MQ=60)
CCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCA                                                                                              >  SRR4302532.2615869/1‑94 (MQ=60)
 CATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGG                                                                                             <  SRR4302532.912214/94‑1 (MQ=60)
 CATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGG                                                                                             <  SRR4302532.2439839/94‑1 (MQ=60)
 CATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAG                                                                                             >  SRR4302532.4622810/1‑94 (MQ=60)
  ATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGG                                                                                            >  SRR4302532.5372730/1‑94 (MQ=60)
  ATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGG                                                                                            >  SRR4302532.4081138/1‑94 (MQ=60)
  ATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATAGCGAACTTAAAAATCTCATTCTGGTTTCTTCGGG                                                                                            >  SRR4302532.5327459/1‑94 (MQ=60)
    TTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTC                                                                                          >  SRR4302532.181334/1‑94 (MQ=60)
     TACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCT                                                                                         <  SRR4302532.1441374/94‑1 (MQ=60)
     TACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCT                                                                                         <  SRR4302532.928061/94‑1 (MQ=60)
        TTCGTCAGGCTAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAA                                                                                      <  SRR4302532.2820796/94‑1 (MQ=60)
        TTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAA                                                                                      >  SRR4302532.6292147/1‑94 (MQ=60)
          CGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTTTTAGTTGGCTATTATCATCGCGAACTGTAAAATCTCATTCTGGTTTCTGTGGGTCTGTATG                                                                                    >  SRR4302532.5832950/1‑94 (MQ=60)
          CGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATG                                                                                    >  SRR4302532.1997101/1‑94 (MQ=60)
           GTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGC                                                                                   >  SRR4302532.1040499/1‑94 (MQ=60)
           GTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGC                                                                                   <  SRR4302532.3201043/94‑1 (MQ=60)
            TCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCG                                                                                  <  SRR4302532.1191752/94‑1 (MQ=60)
             CAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGA                                                                                 >  SRR4302532.1775245/1‑94 (MQ=60)
             CAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGA                                                                                 >  SRR4302532.4439455/1‑94 (MQ=60)
              AGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGAC                                                                                >  SRR4302532.1328270/1‑94 (MQ=60)
              AGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGAC                                                                                >  SRR4302532.4855436/1‑94 (MQ=60)
                 CCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTT                                                                             >  SRR4302532.3518772/1‑94 (MQ=60)
                 CCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTT                                                                             >  SRR4302532.3052329/1‑94 (MQ=60)
                 CCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTT                                                                             <  SRR4302532.2898000/94‑1 (MQ=60)
                  CAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTA                                                                            >  SRR4302532.5143387/1‑94 (MQ=60)
                  CAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTA                                                                            >  SRR4302532.508740/1‑94 (MQ=60)
                    ATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAA                                                                          >  SRR4302532.1178477/1‑94 (MQ=60)
                      CTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATA                                                                        >  SRR4302532.5040550/1‑94 (MQ=60)
                      CTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATA                                                                        >  SRR4302532.6267232/1‑94 (MQ=60)
                       TGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATAC                                                                       >  SRR4302532.5799637/1‑94 (MQ=60)
                         CCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCG                                                                     <  SRR4302532.4452185/94‑1 (MQ=60)
                         CCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCG                                                                     <  SRR4302532.4147922/94‑1 (MQ=60)
                          CGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGG                                                                    >  SRR4302532.5989544/1‑94 (MQ=60)
                          CGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGG                                                                    >  SRR4302532.4284608/1‑94 (MQ=60)
                            GGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCG                                                                  <  SRR4302532.3992113/94‑1 (MQ=60)
                              GCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAA                                                                >  SRR4302532.4916262/1‑94 (MQ=60)
                              GCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAA                                                                <  SRR4302532.2841268/94‑1 (MQ=60)
                                AGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACA                                                              >  SRR4302532.98109/1‑94 (MQ=60)
                                AGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACA                                                              >  SRR4302532.1042360/1‑94 (MQ=60)
                                AGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACA                                                              <  SRR4302532.5783185/94‑1 (MQ=60)
                                  TTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACC                                                            >  SRR4302532.5127860/1‑94 (MQ=60)
                                   TTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCA                                                           <  SRR4302532.1273861/94‑1 (MQ=60)
                                    TCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAG                                                          <  SRR4302532.4991571/94‑1 (MQ=60)
                                      CGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGT                                                        >  SRR4302532.5925686/1‑94 (MQ=60)
                                       GCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTG                                                       <  SRR4302532.1495333/94‑1 (MQ=60)
                                          ATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAA                                                    >  SRR4302532.934232/1‑94 (MQ=60)
                                          ATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGAGAACACCAGGTGCAA                                                    >  SRR4302532.2951474/1‑94 (MQ=60)
                                           TTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAA                                                   >  SRR4302532.2236914/1‑94 (MQ=60)
                                                 GGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGGGCAAATCAGTA                                             >  SRR4302532.1562571/1‑94 (MQ=60)
                                                  GCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAA                                            <  SRR4302532.6008531/94‑1 (MQ=60)
                                                  GCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAA                                            <  SRR4302532.1126370/94‑1 (MQ=60)
                                                  GCTATGATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAA                                            <  SRR4302532.5648239/94‑1 (MQ=60)
                                                    TATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATG                                          <  SRR4302532.5733589/94‑1 (MQ=60)
                                                     ATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGG                                         >  SRR4302532.622068/1‑94 (MQ=60)
                                                     ATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGG                                         >  SRR4302532.1737205/1‑94 (MQ=60)
                                                     ATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGG                                         >  SRR4302532.543898/1‑94 (MQ=60)
                                                     ATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGG                                         >  SRR4302532.1981832/1‑94 (MQ=60)
                                                      TTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGT                                        >  SRR4302532.5767104/1‑94 (MQ=60)
                                                      TTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGT                                        >  SRR4302532.569240/1‑94 (MQ=60)
                                                       TATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTG                                       >  SRR4302532.4631503/1‑94 (MQ=60)
                                                        ATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGT                                      <  SRR4302532.67806/94‑1 (MQ=60)
                                                        ATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGT                                      <  SRR4302532.404470/94‑1 (MQ=60)
                                                          CATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCCGGTGCAAATCAGTAATGGTGTTC                                    >  SRR4302532.4419262/1‑94 (MQ=60)
                                                           ATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCC                                   >  SRR4302532.2439212/1‑94 (MQ=60)
                                                           ATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCC                                   <  SRR4302532.5802213/94‑1 (MQ=60)
                                                           ATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCC                                   >  SRR4302532.922252/1‑94 (MQ=60)
                                                            TCGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCG                                  <  SRR4302532.3114669/94‑1 (MQ=60)
                                                             CGCGAACTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGT                                 >  SRR4302532.2629752/1‑94 (MQ=60)
                                                              GCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTT                                >  SRR4302532.5568562/1‑94 (MQ=60)
                                                                GAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAG                              <  SRR4302532.3493486/94‑1 (MQ=60)
                                                                GAACTGAAAAATCTCATTCGGGTTTCTCCAGGTCTGAATGCGACGTTAAATACCGGCGAACGCCAGGTTCAAATCAGTAATGGTGTTCCGTTAG                              <  SRR4302532.1411688/94‑1 (MQ=60)
                                                                 AACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGG                             >  SRR4302532.4344050/1‑94 (MQ=60)
                                                                  ACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGC                            >  SRR4302532.3438148/1‑94 (MQ=60)
                                                                   CTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCA                           >  SRR4302532.2667738/1‑94 (MQ=60)
                                                                   CTGAAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCA                           >  SRR4302532.593692/1‑94 (MQ=60)
                                                                      AAAAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTT                        >  SRR4302532.2579179/1‑94 (MQ=60)
                                                                        AAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTA                      <  SRR4302532.3395441/94‑1 (MQ=60)
                                                                        AAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTA                      >  SRR4302532.835691/1‑94 (MQ=60)
                                                                        AAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTA                      <  SRR4302532.2081012/94‑1 (MQ=60)
                                                                        AAATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTA                      >  SRR4302532.6099625/1‑94 (MQ=60)
                                                                         AATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAG                     <  SRR4302532.1151958/94‑1 (MQ=60)
                                                                         AATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAG                     <  SRR4302532.4323898/94‑1 (MQ=60)
                                                                          ATCTCATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGG                    <  SRR4302532.2282515/94‑1 (MQ=60)
                                                                              CATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAAC                >  SRR4302532.3866765/1‑94 (MQ=60)
                                                                              CATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAAC                >  SRR4302532.5740686/1‑94 (MQ=60)
                                                                              CATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAACGGTGTTCCGTTAGGCCCTTTAGGTAAC                <  SRR4302532.1524273/94‑1 (MQ=60)
                                                                               ATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACG               <  SRR4302532.94717/94‑1 (MQ=60)
                                                                               ATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACG               <  SRR4302532.1765994/94‑1 (MQ=60)
                                                                               ATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACG               <  SRR4302532.438352/94‑1 (MQ=60)
                                                                               ATTCTGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACG               <  SRR4302532.3922917/94‑1 (MQ=60)
                                                                                TTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGC              <  SRR4302532.3530505/94‑1 (MQ=60)
                                                                                   TGGTTTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTA           >  SRR4302532.5254945/1‑94 (MQ=60)
                                                                                    GGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTAT          <  SRR4302532.4867078/94‑1 (MQ=60)
                                                                                     GTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATT         >  SRR4302532.1955113/1‑94 (MQ=60)
                                                                                       TTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTG       >  SRR4302532.1849164/1‑94 (MQ=60)
                                                                                       TTCTGCAGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTG       >  SRR4302532.5314716/1‑94 (MQ=60)
                                                                                            CAGGTGTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCA  >  SRR4302532.2865688/1‑94 (MQ=60)
                                                                                            CAGGTCTAAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCA  >  SRR4302532.4432861/1‑94 (MQ=60)
                                                                                             |                                                                                            
CCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCA  >  NC_000913/1290211‑1290396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑