Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TAACCAGCGGCAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTATAGCCGAAGT  >  NC_000913/1663670‑1663856
                                                                                             |                                                                                             
TAACCAGCGGCAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCA                                                                                               <  SRR4302532.4748161/94‑1 (MQ=60)
 AACCAGCGGCAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACACCACGCCAG                                                                                              >  SRR4302532.2850000/1‑94 (MQ=60)
  ACCAGCGGCAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGG                                                                                             >  SRR4302532.1129719/1‑94 (MQ=60)
    CAGCGGCAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAG                                                                                           <  SRR4302532.2521302/94‑1 (MQ=60)
       CGGCAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGG                                                                                        <  SRR4302532.5120546/94‑1 (MQ=60)
       CGGCAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGG                                                                                        <  SRR4302532.695937/94‑1 (MQ=60)
        GGCAGTGCAATTGGTCGCGAAGGTGCGACGATTCTTTTAGCTGCCCTTGCCGCGTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGA                                                                                       <  SRR4302532.920359/94‑1 (MQ=60)
          CAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAA                                                                                     >  SRR4302532.6138608/1‑94 (MQ=60)
          CAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAA                                                                                     >  SRR4302532.1877538/1‑94 (MQ=60)
          CAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAA                                                                                     <  SRR4302532.2774372/94‑1 (MQ=60)
          CAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAA                                                                                     <  SRR4302532.5149808/94‑1 (MQ=60)
          CAGAGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCTTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAA                                                                                     <  SRR4302532.4832944/94‑1 (MQ=60)
            GTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATT                                                                                   >  SRR4302532.4997389/1‑94 (MQ=60)
            GTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATT                                                                                   <  SRR4302532.3921731/94‑1 (MQ=60)
              GCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTAT                                                                                 >  SRR4302532.5127854/1‑94 (MQ=60)
               CAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGCGTGGAAATTATG                                                                                >  SRR4302532.5014625/1‑94 (MQ=60)
               CAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATG                                                                                >  SRR4302532.1307461/1‑94 (MQ=60)
               CAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATG                                                                                >  SRR4302532.486010/1‑94 (MQ=60)
                  tgggtggcgagagtgcgatgagttttttagcgaccagtggCGCCTTCTGTTTTACCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGAT                                                                             <  SRR4302532.1302206/54‑1 (MQ=60)
                  TTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGAT                                                                             <  SRR4302532.1454165/94‑1 (MQ=60)
                  TTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGAT                                                                             <  SRR4302532.1454164/94‑1 (MQ=60)
                  TTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGAT                                                                             <  SRR4302532.3666210/94‑1 (MQ=60)
                  TTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGAT                                                                             <  SRR4302532.2705459/94‑1 (MQ=60)
                  ATGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTCTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGAT                                                                             <  SRR4302532.1454163/94‑1 (MQ=60)
                   TGGTCGCGAAGGTTCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATC                                                                            <  SRR4302532.2418179/94‑1 (MQ=60)
                       CGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCT                                                                        >  SRR4302532.1392459/1‑94 (MQ=60)
                       CGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCT                                                                        >  SRR4302532.1392458/1‑94 (MQ=60)
                       CGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCT                                                                        >  SRR4302532.2354701/1‑94 (MQ=60)
                         CGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGT                                                                      >  SRR4302532.2570369/1‑94 (MQ=60)
                          GAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTG                                                                     >  SRR4302532.2609037/1‑94 (MQ=60)
                          GAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTG                                                                     >  SRR4302532.4446819/1‑94 (MQ=60)
                            AGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGG                                                                   >  SRR4302532.5531847/1‑94 (MQ=60)
                            AGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGG                                                                   <  SRR4302532.2141359/94‑1 (MQ=60)
                            AGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGG                                                                   <  SRR4302532.1024282/94‑1 (MQ=60)
                            AGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGG                                                                   <  SRR4302532.5456/94‑1 (MQ=60)
                             GGTGCGATGATTCTTTTAGCTGCCCTTGCCGTCTCCTGTTGTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCTTGTGGGG                                                                  <  SRR4302532.2834183/94‑1 (MQ=60)
                             GGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGG                                                                  <  SRR4302532.1093575/94‑1 (MQ=60)
                               TGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCC                                                                <  SRR4302532.1070975/94‑1 (MQ=60)
                                GCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCG                                                               >  SRR4302532.1644233/1‑94 (MQ=60)
                                  GATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCG                                                             <  SRR4302532.1651424/94‑1 (MQ=60)
                                  GATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCG                                                             <  SRR4302532.3044744/94‑1 (MQ=60)
                                   ATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGG                                                            >  SRR4302532.5781173/1‑94 (MQ=60)
                                    TGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATCATGGATCGCCTGTGGGGCCGCGGC                                                           <  SRR4302532.1218693/94‑1 (MQ=60)
                                     GATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGTCCCGGCG                                                          >  SRR4302532.4682230/1‑94 (MQ=60)
                                     GATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCG                                                          <  SRR4302532.3214388/94‑1 (MQ=60)
                                     GATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCG                                                          <  SRR4302532.2230691/94‑1 (MQ=60)
                                           TTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATG                                                    <  SRR4302532.3885883/94‑1 (MQ=60)
                                             TAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGC                                                  >  SRR4302532.4197461/1‑94 (MQ=60)
                                              AGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCT                                                 <  SRR4302532.3015161/94‑1 (MQ=60)
                                              AGCTGCCCCTGCTTCCTCCAGTTCTGCCCAACGTCATACGCCACGCCAGGAGTGGAAATTATTTATCGCCTGTGGGGCCGCGGCGGGAACGGCT                                                 <  SRR4302532.6228818/94‑1 (MQ=44)
                                                 TGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCG                                              <  SRR4302532.414593/94‑1 (MQ=60)
                                                   CCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGC                                            >  SRR4302532.3671679/1‑94 (MQ=60)
                                                   CCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGC                                            >  SRR4302532.1924021/1‑94 (MQ=60)
                                                    CCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGggggc                                           >  SRR4302532.4555374/1‑89 (MQ=60)
                                                     CTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCT                                          <  SRR4302532.1239481/94‑1 (MQ=60)
                                                     CTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCT                                          <  SRR4302532.5652701/94‑1 (MQ=60)
                                                        GCCGCCTCCTGTTTTGCCCAACGTTGTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATC                                       <  SRR4302532.2244107/94‑1 (MQ=60)
                                                         CCGCCTCCTGTTTTGCCCAACGTTTTCCGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCG                                      <  SRR4302532.5660475/94‑1 (MQ=60)
                                                          CGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGACGGGAATGGCTGCGGCCTATCGT                                     >  SRR4302532.4639795/1‑94 (MQ=60)
                                                          CGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGT                                     <  SRR4302532.3805502/94‑1 (MQ=60)
                                                          CGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGT                                     <  SRR4302532.1883523/94‑1 (MQ=60)
                                                           GCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGGCTATCGTG                                    >  SRR4302532.6349969/1‑94 (MQ=60)
                                                           GCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTG                                    >  SRR4302532.1247398/1‑94 (MQ=60)
                                                              TCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCC                                 >  SRR4302532.1053681/1‑94 (MQ=60)
                                                                CTGTTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCG                               <  SRR4302532.777479/94‑1 (MQ=60)
                                                                   TTTTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTT                            <  SRR4302532.5182443/94‑1 (MQ=60)
                                                                   TTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTT                            <  SRR4302532.2628856/94‑1 (MQ=60)
                                                                     TTGCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGC                          >  SRR4302532.5049893/1‑94 (MQ=60)
                                                                       GCCCAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTG                        <  SRR4302532.5000561/94‑1 (MQ=60)
                                                                          CAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGGCTATCGTGCCCCGCTTGCTGGCG                     >  SRR4302532.1318886/1‑94 (MQ=60)
                                                                          CAACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCgtagtgtgacccgcttggcggcg                     >  SRR4302532.4690850/1‑71 (MQ=60)
                                                                           AACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAG                    >  SRR4302532.4623974/1‑94 (MQ=60)
                                                                            ACGTTTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGT                   <  SRR4302532.6250786/94‑1 (MQ=60)
                                                                                TTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTAT               <  SRR4302532.5272683/94‑1 (MQ=60)
                                                                                TTTACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTAT               <  SRR4302532.5272684/94‑1 (MQ=60)
                                                                                TTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTAT               <  SRR4302532.6036785/94‑1 (MQ=60)
                                                                                TTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTAT               <  SRR4302532.6036784/94‑1 (MQ=60)
                                                                                 TTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATT              <  SRR4302532.4890249/94‑1 (MQ=60)
                                                                                 TTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATT              <  SRR4302532.3273772/94‑1 (MQ=60)
                                                                                  TACGCCACGCGAGGAGTGGAAATTATGGATCGCTTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTT             <  SRR4302532.4147588/94‑1 (MQ=60)
                                                                                  TACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTT             <  SRR4302532.3668957/94‑1 (MQ=60)
                                                                                   ACGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTA            <  SRR4302532.461982/94‑1 (MQ=60)
                                                                                    CGCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTAT           >  SRR4302532.6086187/1‑94 (MQ=60)
                                                                                    CGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGTCGCGGCGGGAATGGCTGCGGCCTATCGCGCCCCGCTTGCTGGCCGTTTATTTTT           >  SRR4302532.2087318/1‑94 (MQ=60)
                                                                                    CGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTAT           <  SRR4302532.565048/94‑1 (MQ=60)
                                                                                     GCCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTATA          <  SRR4302532.517030/94‑1 (MQ=60)
                                                                                     GCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTATA          <  SRR4302532.2090709/94‑1 (MQ=60)
                                                                                     GCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTATA          <  SRR4302532.6153775/94‑1 (MQ=60)
                                                                                     GCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTATA          <  SRR4302532.2335368/94‑1 (MQ=60)
                                                                                      CCACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGGATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTTTAG         >  SRR4302532.244844/1‑94 (MQ=60)
                                                                                       CACGCCGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGGCCCGCTTGCTGGCAGTTTTTTTATAGC        >  SRR4302532.2607062/1‑94 (MQ=60)
                                                                                           CCAGGAGTGGAAAGTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTATAGCCGAA    <  SRR4302532.2178698/94‑1 (MQ=60)
                                                                                            CGGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTATAGCCGAAG   >  SRR4302532.4038571/1‑94 (MQ=60)
                                                                                             GGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTATAGCCGAAGT  <  SRR4302532.6177234/94‑1 (MQ=60)
                                                                                             |                                                                                             
TAACCAGCGGCAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTATAGCCGAAGT  >  NC_000913/1663670‑1663856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑