Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAATGAGGA  >  NC_000913/1696442‑1696628
                                                                                             |                                                                                             
CAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGC                                                                                               <  SRR4302532.3861297/94‑1 (MQ=60)
 AATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCG                                                                                              <  SRR4302532.130767/94‑1 (MQ=60)
  ATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGC                                                                                             >  SRR4302532.580753/1‑94 (MQ=60)
   TAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCA                                                                                            >  SRR4302532.5660959/1‑94 (MQ=60)
    AGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCAC                                                                                           <  SRR4302532.5176794/94‑1 (MQ=60)
     GCTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACT                                                                                          >  SRR4302532.5295474/1‑94 (MQ=60)
       TTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCC                                                                                        <  SRR4302532.4055203/94‑1 (MQ=60)
         CGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAA                                                                                      <  SRR4302532.3005805/94‑1 (MQ=60)
          GTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAAC                                                                                     >  SRR4302532.4720684/1‑94 (MQ=60)
           TTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACA                                                                                    >  SRR4302532.3759641/1‑94 (MQ=60)
            TATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACAC                                                                                   >  SRR4302532.2552911/1‑94 (MQ=60)
              TAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCC                                                                                 <  SRR4302532.937486/94‑1 (MQ=60)
               AGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCA                                                                                <  SRR4302532.2568741/94‑1 (MQ=60)
               AGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCA                                                                                <  SRR4302532.6319762/94‑1 (MQ=60)
                 CAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAAT                                                                              <  SRR4302532.6004743/94‑1 (MQ=60)
                 CAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAAT                                                                              >  SRR4302532.4130598/1‑94 (MQ=60)
                   AACCACGGCGCTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCG                                                                            <  SRR4302532.1297366/94‑1 (MQ=60)
                   AACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCG                                                                            <  SRR4302532.3805845/94‑1 (MQ=60)
                     CCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGACGTGCACTCCAACACCCAATCGCT                                                                          >  SRR4302532.3602540/1‑94 (MQ=60)
                       ACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTAT                                                                        <  SRR4302532.5321808/94‑1 (MQ=60)
                       ACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTAT                                                                        <  SRR4302532.377112/94‑1 (MQ=60)
                        CGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATG                                                                       <  SRR4302532.3728497/94‑1 (MQ=60)
                         GGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGA                                                                      >  SRR4302532.5151095/1‑94 (MQ=60)
                          GCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAA                                                                     >  SRR4302532.4450175/1‑94 (MQ=60)
                          GCACTGATGGTCGGGTTATGACGCAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAA                                                                     <  SRR4302532.3634539/94‑1 (MQ=60)
                           CACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGGTTCCGCGGCTTGCTTCTTGCTGGAAGCGCACTCCAAACCCCAATCGCTATGAAA                                                                    >  SRR4302532.489432/1‑94 (MQ=60)
                           CACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAA                                                                    >  SRR4302532.489433/1‑94 (MQ=60)
                            ACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAAC                                                                   <  SRR4302532.3892788/94‑1 (MQ=60)
                            ACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAAC                                                                   <  SRR4302532.2787969/94‑1 (MQ=60)
                            ACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAAC                                                                   <  SRR4302532.2551037/94‑1 (MQ=60)
                            ACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAAC                                                                   >  SRR4302532.6029208/1‑94 (MQ=60)
                             CTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACG                                                                  <  SRR4302532.3088438/94‑1 (MQ=60)
                             CTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACG                                                                  <  SRR4302532.4687334/94‑1 (MQ=60)
                              TGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGG                                                                 >  SRR4302532.4961772/1‑94 (MQ=60)
                              TGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGG                                                                 >  SRR4302532.3282805/1‑94 (MQ=60)
                              TGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGG                                                                 >  SRR4302532.4466635/1‑94 (MQ=60)
                               GATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGC                                                                >  SRR4302532.1678530/1‑94 (MQ=60)
                                ATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCA                                                               <  SRR4302532.4987437/94‑1 (MQ=60)
                                 TGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAG                                                              <  SRR4302532.4422663/94‑1 (MQ=60)
                                  GGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGG                                                             <  SRR4302532.1091385/94‑1 (MQ=60)
                                    TCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCC                                                           <  SRR4302532.157346/94‑1 (MQ=60)
                                    TCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCC                                                           <  SRR4302532.157347/94‑1 (MQ=60)
                                       GGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAA                                                        >  SRR4302532.1361904/1‑94 (MQ=60)
                                        GTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATAAAACGGCAGGCCAAAT                                                       <  SRR4302532.972178/94‑1 (MQ=60)
                                        GTTATGAAATAAAAGCGCTGTGATAGCTTCCGCGGCAGGCTTCTGGCTGGAAGTGCCCTCCAACACCTAATCGCTATGAAACGGCAGGCCAAAT                                                       <  SRR4302532.2390035/94‑1 (MQ=60)
                                         TTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATT                                                      <  SRR4302532.2167410/94‑1 (MQ=60)
                                           ATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTT                                                    <  SRR4302532.2713802/94‑1 (MQ=60)
                                            TGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTA                                                   >  SRR4302532.958118/1‑94 (MQ=60)
                                            TGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTA                                                   >  SRR4302532.6234648/1‑94 (MQ=60)
                                             GACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAG                                                  <  SRR4302532.1851683/94‑1 (MQ=60)
                                             GACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAG                                                  >  SRR4302532.2674705/1‑94 (MQ=60)
                                                 TAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGA                                              <  SRR4302532.6034114/94‑1 (MQ=60)
                                                  AAAAGCGCCGTGATGGGTTGCGGCGCTTGCTTCTGGCTGGAAAGGCCCTCCAACACCCATGCGCTCTGAACCGGCAGGCCAAATTTTAGTAGAG                                             <  SRR4302532.369283/94‑1 (MQ=25)
                                                  AAAAGCGCCGTGATAGCTTCCGCGTCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAG                                             <  SRR4302532.2391446/94‑1 (MQ=60)
                                                  AAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAG                                             >  SRR4302532.493098/1‑94 (MQ=60)
                                                  AAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAG                                             >  SRR4302532.1019554/1‑94 (MQ=60)
                                                   AAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTTTGAAACGGCAGGCCAAATTTTACTAGAAT                                            >  SRR4302532.6294989/1‑94 (MQ=60)
                                                   AAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGT                                            <  SRR4302532.1006057/94‑1 (MQ=60)
                                                    AAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTT                                           <  SRR4302532.4350312/94‑1 (MQ=60)
                                                    AAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTT                                           <  SRR4302532.5613922/94‑1 (MQ=60)
                                                       CGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCA                                        <  SRR4302532.4810861/94‑1 (MQ=60)
                                                        GCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACCGCAGGCCCAAATTTAGTAGAGGTGCAC                                       >  SRR4302532.6180479/1‑94 (MQ=60)
                                                         CCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACA                                      <  SRR4302532.3593511/94‑1 (MQ=60)
                                                          CGTTATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGCTGCACAA                                     >  SRR4302532.38921/1‑94 (MQ=60)
                                                           GTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAAT                                    <  SRR4302532.5119319/94‑1 (MQ=60)
                                                           CTGATAGCTTCCGCGGCTTGCTTCTGGCTGTAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAAT                                    <  SRR4302532.2551278/94‑1 (MQ=60)
                                                            TGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATA                                   <  SRR4302532.3822908/94‑1 (MQ=60)
                                                            TGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATA                                   >  SRR4302532.5864034/1‑94 (MQ=60)
                                                            TGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATA                                   <  SRR4302532.3626477/94‑1 (MQ=60)
                                                            TGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGATGCACAATA                                   >  SRR4302532.1156085/1‑94 (MQ=60)
                                                             GATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAG                                  >  SRR4302532.852233/1‑94 (MQ=60)
                                                             GATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAG                                  <  SRR4302532.4406810/94‑1 (MQ=60)
                                                             GATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAG                                  <  SRR4302532.6161799/94‑1 (MQ=60)
                                                              ATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGC                                 <  SRR4302532.3108317/94‑1 (MQ=60)
                                                               TAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCC                                <  SRR4302532.4418403/94‑1 (MQ=60)
                                                               TAGCTTCCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCC                                <  SRR4302532.1557132/94‑1 (MQ=60)
                                                                  CTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCC                             <  SRR4302532.3316581/94‑1 (MQ=60)
                                                                     CCGCGGCTTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAAC                          <  SRR4302532.231535/94‑1 (MQ=60)
                                                                      CGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACC                         <  SRR4302532.3084204/94‑1 (MQ=60)
                                                                      CGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACC                         <  SRR4302532.5520969/94‑1 (MQ=60)
                                                                       GCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAACCCCCAACCC                        >  SRR4302532.3038782/1‑94 (MQ=60)
                                                                         GGCTTGCTTCTGGCTGGAAGTGCACTCACACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAATTGCACAATATGCCCCAACCCGT                      >  SRR4302532.3905784/1‑94 (MQ=60)
                                                                          GCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTT                     >  SRR4302532.5858769/1‑94 (MQ=60)
                                                                            TTGCTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCT                   <  SRR4302532.6211165/94‑1 (MQ=60)
                                                                               CTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCA                >  SRR4302532.4907300/1‑94 (MQ=60)
                                                                               CTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCA                >  SRR4302532.4276628/1‑94 (MQ=60)
                                                                               CTTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCA                >  SRR4302532.4955994/1‑94 (MQ=60)
                                                                                TTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCAC               <  SRR4302532.1908030/94‑1 (MQ=60)
                                                                                TTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCAC               <  SRR4302532.2108854/94‑1 (MQ=60)
                                                                                TTCTGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCAC               <  SRR4302532.4559691/94‑1 (MQ=60)
                                                                                   TGGCTGGAAGCGCCCTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGCTCTGCACGGG            >  SRR4302532.2767043/1‑94 (MQ=60)
                                                                                   TGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGG            >  SRR4302532.2384347/1‑94 (MQ=60)
                                                                                   TGGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGG            >  SRR4302532.2767042/1‑94 (MQ=60)
                                                                                    GGCTGGAAGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGT           <  SRR4302532.2106798/94‑1 (MQ=60)
                                                                                      CTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCCTTCTGCACGGGTTA         >  SRR4302532.5018079/1‑94 (MQ=60)
                                                                                       TGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAA        >  SRR4302532.5119306/1‑94 (MQ=60)
                                                                                       TGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAA        >  SRR4302532.4239476/1‑94 (MQ=60)
                                                                                       TGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAA        >  SRR4302532.1583311/1‑94 (MQ=60)
                                                                                           AGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAATGAG    <  SRR4302532.669975/94‑1 (MQ=60)
                                                                                           AGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAATGAG    >  SRR4302532.4144355/1‑94 (MQ=60)
                                                                                           AGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAATGAG    <  SRR4302532.3763620/94‑1 (MQ=60)
                                                                                           AGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAATGAG    <  SRR4302532.1820883/94‑1 (MQ=60)
                                                                                           AGCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAATGAG    <  SRR4302532.4029929/94‑1 (MQ=60)
                                                                                            GTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAATGAGG   >  SRR4302532.1867465/1‑94 (MQ=60)
                                                                                            GCGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAATGAGG   <  SRR4302532.2125002/94‑1 (MQ=60)
                                                                                             TGCACTCCAACACCCAATCGCTATGAAGCGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAATGAGGA  <  SRR4302532.2020309/94‑1 (MQ=60)
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CAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGCAGGCCAAATTTTAGTAGAGTTGCACAATAGCCCCCAACCCGTTCTGCACGGGTTAATGAGGA  >  NC_000913/1696442‑1696628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑