Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCAT  >  NC_000913/1808263‑1808447
                                                                                            |                                                                                            
CTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGC                                                                                             >  SRR4302532.4338790/1‑94 (MQ=60)
CTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGAC                                                                                             >  SRR4302532.102723/1‑94 (MQ=60)
CTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGAC                                                                                             <  SRR4302532.2928367/94‑1 (MQ=60)
CTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGGGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGC                                                                                             >  SRR4302532.5911653/1‑94 (MQ=60)
CTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGCGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGC                                                                                             <  SRR4302532.4838027/94‑1 (MQ=60)
   TTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTG                                                                                          >  SRR4302532.5956156/1‑94 (MQ=60)
   ATGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACTGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTG                                                                                          <  SRR4302532.3363380/94‑1 (MQ=60)
    TGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGT                                                                                         >  SRR4302532.4906804/1‑94 (MQ=60)
     GCTTGTGCGGTATTTGCCAAAAACTCCGAGCTGACGCCCGTGCTGTCACAGGGTTACTGGTGGCATATTGTCCTTTCCGCAATCCTGGCGTGTT                                                                                        <  SRR4302532.3605050/94‑1 (MQ=60)
        TGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGT                                                                                     >  SRR4302532.4256047/1‑94 (MQ=60)
        TGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGT                                                                                     <  SRR4302532.1730268/94‑1 (MQ=60)
         GTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTT                                                                                    <  SRR4302532.6226253/94‑1 (MQ=60)
          TGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTA                                                                                   >  SRR4302532.1702124/1‑94 (MQ=60)
            CGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACC                                                                                 <  SRR4302532.5851285/94‑1 (MQ=60)
             GGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCG                                                                                <  SRR4302532.449668/94‑1 (MQ=60)
             GGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCG                                                                                <  SRR4302532.6148850/94‑1 (MQ=60)
              GTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGG                                                                               >  SRR4302532.2725467/1‑94 (MQ=60)
              GTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGG                                                                               <  SRR4302532.5442621/94‑1 (MQ=60)
               TATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGA                                                                              <  SRR4302532.633423/94‑1 (MQ=60)
               TATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGA                                                                              >  SRR4302532.5598129/1‑94 (MQ=60)
               TATTTGCCAAAAATGCCGAGCTGACGCCCGCGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGA                                                                              <  SRR4302532.190626/94‑1 (MQ=60)
                ATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGAC                                                                             >  SRR4302532.3231467/1‑94 (MQ=60)
                ATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGAC                                                                             <  SRR4302532.4143331/94‑1 (MQ=60)
                 TTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACA                                                                            <  SRR4302532.2754628/94‑1 (MQ=60)
                   TGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATC                                                                          <  SRR4302532.5152877/94‑1 (MQ=60)
                     CCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGA                                                                        <  SRR4302532.5028299/94‑1 (MQ=60)
                       AAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATC                                                                      >  SRR4302532.3847664/1‑94 (MQ=60)
                       AAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATC                                                                      >  SRR4302532.3280573/1‑94 (MQ=60)
                         AAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCAC                                                                    >  SRR4302532.3129905/1‑94 (MQ=60)
                         AAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCAC                                                                    <  SRR4302532.3624905/94‑1 (MQ=60)
                               CGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAG                                                              >  SRR4302532.2362575/1‑94 (MQ=60)
                               CGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAG                                                              <  SRR4302532.530195/94‑1 (MQ=60)
                                GAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGT                                                             >  SRR4302532.5484105/1‑94 (MQ=60)
                                GAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGT                                                             <  SRR4302532.228923/94‑1 (MQ=60)
                                   CTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGT                                                          <  SRR4302532.4833415/94‑1 (MQ=60)
                                   CTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGT                                                          <  SRR4302532.3711465/94‑1 (MQ=60)
                                   CTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGT                                                          >  SRR4302532.3588177/1‑94 (MQ=60)
                                       CGCCCGCGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCT                                                      >  SRR4302532.784138/1‑94 (MQ=60)
                                        GCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTTTTTGTTACCGGGCATCGATCACCCAAAGTCGTTTCTT                                                     <  SRR4302532.4195179/94‑1 (MQ=60)
                                        GCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTT                                                     <  SRR4302532.4432384/94‑1 (MQ=60)
                                         CCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTG                                                    >  SRR4302532.541820/1‑94 (MQ=60)
                                         CCCGCGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTG                                                    <  SRR4302532.5666087/94‑1 (MQ=60)
                                          CCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTGCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAACCGTTTCTTGG                                                   >  SRR4302532.4196281/1‑94 (MQ=60)
                                          CCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGG                                                   <  SRR4302532.64772/94‑1 (MQ=60)
                                           CGTGCTGGCACAGGGTTACTGGTGGCATATTTTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGG                                                  <  SRR4302532.5170305/94‑1 (MQ=60)
                                           CGTGCTGGCACAGGGTGACTGGTGGCATATTGTACCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGG                                                  >  SRR4302532.4029626/1‑94 (MQ=60)
                                              GCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAG                                               <  SRR4302532.2926415/94‑1 (MQ=60)
                                                TGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCG                                             <  SRR4302532.5831717/94‑1 (MQ=60)
                                                   CACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAATCGTTTCCTGGGCAGCGATT                                          >  SRR4302532.5066477/1‑94 (MQ=60)
                                                    ACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTA                                         <  SRR4302532.1576241/94‑1 (MQ=60)
                                                      AGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAA                                       <  SRR4302532.2594117/94‑1 (MQ=60)
                                                      AGGGTGACTGGAGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAA                                       <  SRR4302532.2917643/94‑1 (MQ=60)
                                                        GGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAAT                                     <  SRR4302532.2722550/94‑1 (MQ=60)
                                                        GGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAAT                                     <  SRR4302532.2824916/94‑1 (MQ=60)
                                                         gtgaagggttgcatcctcgcccatcccccATCCTGACCTGTTTGTTACCGGACATCCCTCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATG                                    <  SRR4302532.1946197/65‑1 (MQ=60)
                                                         GTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATG                                    <  SRR4302532.308240/94‑1 (MQ=60)
                                                           GACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGA                                  >  SRR4302532.6200020/1‑94 (MQ=60)
                                                            ACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGAT                                 <  SRR4302532.4517869/94‑1 (MQ=60)
                                                             CTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATA                                <  SRR4302532.3274519/94‑1 (MQ=60)
                                                             CTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATAGATA                                >  SRR4302532.4820679/1‑94 (MQ=60)
                                                              TGGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATAT                               <  SRR4302532.994662/94‑1 (MQ=60)
                                                               GGTGGCATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATC                              >  SRR4302532.3332881/1‑94 (MQ=60)
                                                                 TGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAA                            <  SRR4302532.972668/94‑1 (MQ=60)
                                                                 TGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAA                            <  SRR4302532.3911012/94‑1 (MQ=60)
                                                                  GGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAA                           <  SRR4302532.5793064/94‑1 (MQ=60)
                                                                    CATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAAC                         <  SRR4302532.1074269/94‑1 (MQ=60)
                                                                    CATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAAC                         <  SRR4302532.6254761/94‑1 (MQ=60)
                                                                    CATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAAC                         >  SRR4302532.5927089/1‑94 (MQ=60)
                                                                     ATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCCAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACC                        >  SRR4302532.104925/1‑94 (MQ=60)
                                                                     ATATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACC                        <  SRR4302532.2294873/94‑1 (MQ=60)
                                                                     ATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACC                        >  SRR4302532.5475050/1‑94 (MQ=60)
                                                                     ATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACC                        >  SRR4302532.4088235/1‑94 (MQ=60)
                                                                      TATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAACATGGATATCAAAACCG                       <  SRR4302532.6288871/94‑1 (MQ=60)
                                                                      TATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCG                       <  SRR4302532.5048347/94‑1 (MQ=60)
                                                                       ATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGA                      >  SRR4302532.6259891/1‑94 (MQ=60)
                                                                       ATTGTCCCTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGA                      >  SRR4302532.1639053/1‑94 (MQ=60)
                                                                        TTGTCCCTTCCGCAATCCTGTCGTGTTGGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGAT                     <  SRR4302532.1186969/94‑1 (MQ=60)
                                                                         TGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATC                    <  SRR4302532.3758032/94‑1 (MQ=60)
                                                                           TCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGC                  >  SRR4302532.2980933/1‑94 (MQ=60)
                                                                              CTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCG               >  SRR4302532.6261223/1‑94 (MQ=60)
                                                                              CTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCG               >  SRR4302532.6261222/1‑94 (MQ=60)
                                                                              CTTCCGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCG               >  SRR4302532.4796658/1‑94 (MQ=60)
                                                                                  CGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCT           <  SRR4302532.1129738/94‑1 (MQ=60)
                                                                                  CGCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAAACGATCGCCGCCGCT           >  SRR4302532.1704597/1‑94 (MQ=60)
                                                                                  CGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCT           >  SRR4302532.6239618/1‑94 (MQ=60)
                                                                                   GCAATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTT          >  SRR4302532.4898028/1‑94 (MQ=60)
                                                                                     AATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTT        >  SRR4302532.5066232/1‑94 (MQ=60)
                                                                                      ATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTG       <  SRR4302532.2164609/94‑1 (MQ=60)
                                                                                      ATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTG       >  SRR4302532.2794388/1‑94 (MQ=60)
                                                                                      ATCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAAACGATCGCCCGCGCTTTTG       >  SRR4302532.2794389/1‑94 (MQ=60)
                                                                                       TCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGG      <  SRR4302532.2090466/94‑1 (MQ=60)
                                                                                       TCCTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGG      <  SRR4302532.2394623/94‑1 (MQ=60)
                                                                                         CTGGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGC    >  SRR4302532.2141766/1‑94 (MQ=60)
                                                                                         CTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGC    <  SRR4302532.5996008/94‑1 (MQ=60)
                                                                                           GGCGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCAT  >  SRR4302532.3916062/1‑94 (MQ=60)
                                                                                            |                                                                                            
CTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCAT  >  NC_000913/1808263‑1808447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑