Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCATCATCGA  >  NC_000913/2210777‑2210963
                                                                                             |                                                                                             
AGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTC                                                                                               >  SRR4302532.804771/1‑94 (MQ=60)
 GCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCC                                                                                              <  SRR4302532.3901447/94‑1 (MQ=60)
  CATCCCCCCCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCC                                                                                             <  SRR4302532.2944301/94‑1 (MQ=60)
  CATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCC                                                                                             <  SRR4302532.2944300/94‑1 (MQ=60)
  CATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCC                                                                                             <  SRR4302532.6223267/94‑1 (MQ=60)
  CATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCC                                                                                             >  SRR4302532.1983793/1‑94 (MQ=60)
   ATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCA                                                                                            >  SRR4302532.2294344/1‑94 (MQ=60)
   ATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCA                                                                                            >  SRR4302532.4599218/1‑94 (MQ=60)
   ATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCA                                                                                            >  SRR4302532.3109984/1‑94 (MQ=60)
   ATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGAACATCCGGGGGCGGTTGATGCACAGCGCCGATCCCTCCCA                                                                                            >  SRR4302532.4599219/1‑94 (MQ=60)
    TCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC                                                                                           <  SRR4302532.4368576/94‑1 (MQ=60)
    TCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCAC                                                                                           <  SRR4302532.872991/94‑1 (MQ=60)
    TCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCAC                                                                                           >  SRR4302532.2248991/1‑94 (MQ=60)
     CCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACG                                                                                          <  SRR4302532.4509908/94‑1 (MQ=60)
      CCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGG                                                                                         <  SRR4302532.5533182/94‑1 (MQ=60)
         ACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGT                                                                                      >  SRR4302532.5971545/1‑94 (MQ=60)
          CCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTT                                                                                     >  SRR4302532.4552639/1‑94 (MQ=60)
            ATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTG                                                                                   >  SRR4302532.2021649/1‑94 (MQ=60)
            ATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTG                                                                                   >  SRR4302532.1857081/1‑94 (MQ=60)
            ATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTG                                                                                   >  SRR4302532.3826203/1‑94 (MQ=60)
             TTTCCAGACCACTGATGCGCGGCATCTGTATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGA                                                                                  <  SRR4302532.3525575/94‑1 (MQ=60)
                CCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACA                                                                               <  SRR4302532.4538842/94‑1 (MQ=60)
                CCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACA                                                                               >  SRR4302532.5942515/1‑94 (MQ=60)
                 CAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACAC                                                                              >  SRR4302532.782664/1‑94 (MQ=60)
                    ACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCT                                                                           >  SRR4302532.69746/1‑94 (MQ=60)
                    ACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCT                                                                           <  SRR4302532.4584785/94‑1 (MQ=60)
                     CCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTC                                                                          <  SRR4302532.5306602/94‑1 (MQ=60)
                     CCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTC                                                                          <  SRR4302532.4642228/94‑1 (MQ=60)
                     CCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTC                                                                          <  SRR4302532.740975/94‑1 (MQ=60)
                      CACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCC                                                                         <  SRR4302532.1494720/94‑1 (MQ=60)
                       CCTGAGGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCA                                                                        <  SRR4302532.2133707/94‑1 (MQ=60)
                        CTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAA                                                                       >  SRR4302532.2242453/1‑94 (MQ=60)
                         TGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAAC                                                                      <  SRR4302532.329178/94‑1 (MQ=60)
                         TGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAAC                                                                      <  SRR4302532.1513629/94‑1 (MQ=60)
                         TGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAAC                                                                      <  SRR4302532.415773/94‑1 (MQ=60)
                         TGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAAC                                                                      >  SRR4302532.595257/1‑94 (MQ=60)
                         TGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAAC                                                                      <  SRR4302532.3611577/94‑1 (MQ=60)
                         CGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAAC                                                                      <  SRR4302532.3061929/94‑1 (MQ=60)
                          GATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACG                                                                     <  SRR4302532.1064446/94‑1 (MQ=60)
                           ATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGA                                                                    >  SRR4302532.4263553/1‑94 (MQ=60)
                           ATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGA                                                                    <  SRR4302532.2518171/94‑1 (MQ=60)
                            TGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGAT                                                                   <  SRR4302532.2983259/94‑1 (MQ=60)
                              CGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTT                                                                 <  SRR4302532.5732307/94‑1 (MQ=60)
                                CGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCA                                                               <  SRR4302532.1886318/94‑1 (MQ=60)
                                CGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCA                                                               >  SRR4302532.2405214/1‑94 (MQ=60)
                                CGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCA                                                               <  SRR4302532.2759735/94‑1 (MQ=60)
                                 GGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAA                                                              <  SRR4302532.3593730/94‑1 (MQ=60)
                                  GCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAAT                                                             <  SRR4302532.307484/94‑1 (MQ=60)
                                   CATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATA                                                            >  SRR4302532.1119792/1‑94 (MQ=60)
                                    ATCTGGATATCGAGAAACAGCATATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATAT                                                           <  SRR4302532.3257310/94‑1 (MQ=60)
                                    ATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATAT                                                           >  SRR4302532.4863072/1‑94 (MQ=60)
                                    ATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATAT                                                           <  SRR4302532.3048821/94‑1 (MQ=60)
                                     TCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATC                                                          <  SRR4302532.38343/94‑1 (MQ=60)
                                      CTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCG                                                         <  SRR4302532.5674801/94‑1 (MQ=60)
                                       TGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGC                                                        >  SRR4302532.2430017/1‑94 (MQ=60)
                                        GGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCT                                                       >  SRR4302532.2486712/1‑94 (MQ=60)
                                          ATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCT                                                     >  SRR4302532.5903222/1‑94 (MQ=60)
                                          ATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCT                                                     <  SRR4302532.446003/94‑1 (MQ=60)
                                           TATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTG                                                    >  SRR4302532.3523865/1‑94 (MQ=60)
                                             TCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCT                                                  <  SRR4302532.6191271/94‑1 (MQ=60)
                                              CGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTC                                                 <  SRR4302532.5860499/94‑1 (MQ=60)
                                                AGAAACAGCACATCCGGGCGCATGTTGTGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCT                                               <  SRR4302532.6016910/94‑1 (MQ=60)
                                                 GAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTG                                              >  SRR4302532.5107544/1‑94 (MQ=60)
                                                  AAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGC                                             >  SRR4302532.3223291/1‑94 (MQ=60)
                                                   AACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCA                                            <  SRR4302532.2486489/94‑1 (MQ=60)
                                                       GCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAA                                        >  SRR4302532.445259/1‑94 (MQ=60)
                                                        CACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAAT                                       <  SRR4302532.3084575/94‑1 (MQ=60)
                                                          CATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATAC                                     <  SRR4302532.241881/94‑1 (MQ=60)
                                                           ATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACA                                    <  SRR4302532.2509846/94‑1 (MQ=60)
                                                           ATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACA                                    >  SRR4302532.1355014/1‑94 (MQ=60)
                                                            TCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACAC                                   <  SRR4302532.6068180/94‑1 (MQ=60)
                                                            TCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACAC                                   <  SRR4302532.709789/94‑1 (MQ=60)
                                                            TCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACAC                                   <  SRR4302532.4697714/94‑1 (MQ=60)
                                                            TCCGGGCGCAGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTTAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACAC                                   <  SRR4302532.5878252/94‑1 (MQ=60)
                                                              CGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGC                                 >  SRR4302532.611452/1‑94 (MQ=60)
                                                               GGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCA                                >  SRR4302532.5008984/1‑94 (MQ=60)
                                                                 GCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGG                              >  SRR4302532.337345/1‑94 (MQ=60)
                                                                 GCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGG                              <  SRR4302532.1726398/94‑1 (MQ=60)
                                                                   GCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTT                            <  SRR4302532.3124621/94‑1 (MQ=60)
                                                                     AGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCT                          >  SRR4302532.292944/1‑94 (MQ=60)
                                                                     AGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCT                          >  SRR4302532.292945/1‑94 (MQ=60)
                                                                     AGTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCT                          >  SRR4302532.6323739/1‑94 (MQ=60)
                                                                      GTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTC                         >  SRR4302532.5696017/1‑94 (MQ=60)
                                                                      GTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTC                         >  SRR4302532.130581/1‑94 (MQ=60)
                                                                      GTTTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTC                         >  SRR4302532.863993/1‑94 (MQ=60)
                                                                        TTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCC                       <  SRR4302532.267235/94‑1 (MQ=60)
                                                                        TTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCC                       <  SRR4302532.4997334/94‑1 (MQ=60)
                                                                        TTATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCC                       >  SRR4302532.1806315/1‑94 (MQ=60)
                                                                         TATGCACCGCGCCGATCCCTCCCGCGGCGATTGAACTCTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCG                      <  SRR4302532.4731553/94‑1 (MQ=60)
                                                                         TATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCG                      <  SRR4302532.3032268/94‑1 (MQ=60)
                                                                          ATGCACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGT                     >  SRR4302532.1012592/1‑94 (MQ=60)
                                                                              ACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTA                 >  SRR4302532.3196332/1‑94 (MQ=60)
                                                                              ACCGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTA                 >  SRR4302532.1627406/1‑94 (MQ=60)
                                                                                CGCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAAC               >  SRR4302532.2346597/1‑94 (MQ=60)
                                                                                 GCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACG              <  SRR4302532.1319560/94‑1 (MQ=60)
                                                                                 GCGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACG              <  SRR4302532.4404721/94‑1 (MQ=60)
                                                                                  CGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGG             >  SRR4302532.1466043/1‑94 (MQ=60)
                                                                                  CGCCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGG             <  SRR4302532.5176230/94‑1 (MQ=60)
                                                                                    CCGATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTT           >  SRR4302532.6092942/1‑94 (MQ=60)
                                                                                     CGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTC          >  SRR4302532.5568449/1‑94 (MQ=60)
                                                                                     CGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTC          <  SRR4302532.4366743/94‑1 (MQ=60)
                                                                                     CGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACAGTTC          >  SRR4302532.209764/1‑94 (MQ=60)
                                                                                      GATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCA         <  SRR4302532.1032216/94‑1 (MQ=60)
                                                                                      GATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCA         <  SRR4302532.2436960/94‑1 (MQ=60)
                                                                                      GATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCA         >  SRR4302532.5956104/1‑94 (MQ=60)
                                                                                      GATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCA         >  SRR4302532.3670031/1‑94 (MQ=60)
                                                                                      GATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCA         >  SRR4302532.844438/1‑94 (MQ=60)
                                                                                      CATCCCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCA         <  SRR4302532.6007896/94‑1 (MQ=60)
                                                                                         CCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCATCA      <  SRR4302532.4281359/94‑1 (MQ=60)
                                                                                          CCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCATCAT     <  SRR4302532.6143536/94‑1 (MQ=60)
                                                                                          CCTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCATCAT     >  SRR4302532.904506/1‑94 (MQ=60)
                                                                                           CTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCATCATC    >  SRR4302532.6024407/1‑94 (MQ=60)
                                                                                           CTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCATCATC    >  SRR4302532.724688/1‑94 (MQ=60)
                                                                                           CTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCATCATC    <  SRR4302532.2852091/94‑1 (MQ=60)
                                                                                           CTCCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCATCATC    >  SRR4302532.2784108/1‑94 (MQ=60)
                                                                                             CCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCATCATCGA  >  SRR4302532.5500752/1‑94 (MQ=60)
                                                                                             |                                                                                             
AGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCACGGCGTTTGAACACTCTCCAACGATTTCAATATCGCTCTGCTCCTGCAAAAATACACGCAGGTTCTCCCGTGCTAACGGTTCATCATCGA  >  NC_000913/2210777‑2210963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑