Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCCAACGGAACCCGCTCTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGAT  >  NC_000913/2284820‑2285006
                                                                                              |                                                                                             
CCCAACGGAACCCGCTCTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGC                                                                                               <  SRR4302532.80406/94‑1 (MQ=60)
CCCAACGGAACCCGCTCTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGC                                                                                               >  SRR4302532.759569/1‑94 (MQ=60)
     CGGAACCCGCTCTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGG                                                                                          <  SRR4302532.1449626/94‑1 (MQ=60)
       GAACCCGCTCTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCA                                                                                        >  SRR4302532.4293538/1‑94 (MQ=60)
          CCCGCTCTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAA                                                                                     >  SRR4302532.4854080/1‑94 (MQ=60)
           CCGCTCTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAAC                                                                                    <  SRR4302532.5295403/94‑1 (MQ=60)
            CGCTCTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACG                                                                                   >  SRR4302532.5119778/1‑94 (MQ=60)
              ctcaaaacatgaccgcccgcgcttttacttttgaAATCGCC‑AAACGCTGTTCCCCAATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGT                                                                                 <  SRR4302532.3693601/60‑1 (MQ=60)
              CTCTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGT                                                                                 >  SRR4302532.4313605/1‑94 (MQ=60)
                CTCAACATTAGCACCCGCGCCGTTACTATTGGAATCGCC‑AAGCGCTGTTGCACCATTACTCATCTTGCGATGGATGGCGTTGGCAAAACGGTCA                                                                               >  SRR4302532.5998626/1‑94 (MQ=60)
                CTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCA                                                                               <  SRR4302532.2728364/94‑1 (MQ=60)
                CTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCA                                                                               >  SRR4302532.823416/1‑94 (MQ=60)
                  CAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAAC                                                                             >  SRR4302532.5354525/1‑94 (MQ=60)
                   AACATGAGCACCCGCGCCGTTACTATTGTAATCGCT‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACT                                                                            <  SRR4302532.6305317/94‑1 (MQ=60)
                    ACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTT                                                                           >  SRR4302532.1270332/1‑94 (MQ=60)
                     CATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTT                                                                          >  SRR4302532.1471353/1‑94 (MQ=60)
                      ATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTA                                                                         >  SRR4302532.716269/1‑94 (MQ=60)
                       TGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCA                                                                        >  SRR4302532.4990751/1‑94 (MQ=60)
                       TGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCA                                                                        >  SRR4302532.1389191/1‑94 (MQ=60)
                           CACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCAC                                                                    >  SRR4302532.3936895/1‑94 (MQ=60)
                             CCCGCGGCGTTTCTATTGTAATCCCCAAAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACC                                                                   <  SRR4302532.2443048/94‑1 (MQ=60)
                              CCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCC                                                                 >  SRR4302532.144054/1‑94 (MQ=60)
                               CGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCA                                                                <  SRR4302532.5778073/94‑1 (MQ=60)
                               CACGCCGTTACTATTGCAATCGCC‑AAAAACTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAcaaaggtcacatttaaacaccaca                                                                >  SRR4302532.3152436/1‑70 (MQ=60)
                                GCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCAT                                                               <  SRR4302532.458813/94‑1 (MQ=60)
                                 CGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATC                                                              >  SRR4302532.2788697/1‑94 (MQ=60)
                                 CGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATC                                                              <  SRR4302532.3285121/94‑1 (MQ=60)
                                  GCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCA                                                             >  SRR4302532.171846/1‑94 (MQ=60)
                                  GCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCA                                                             <  SRR4302532.1970287/94‑1 (MQ=60)
                                  GCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCA                                                             >  SRR4302532.4007155/1‑94 (MQ=60)
                                  GCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCA                                                             >  SRR4302532.5391720/1‑94 (MQ=60)
                                  GCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCA                                                             >  SRR4302532.4979008/1‑94 (MQ=60)
                                    CGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAAC                                                           >  SRR4302532.5614706/1‑94 (MQ=60)
                                    CGTTACTATTGTAATCGAC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTGGGCAAAACGGTCAACTTTCACCACCCCATCAAC                                                           <  SRR4302532.2833414/94‑1 (MQ=60)
                                     GTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACA                                                          >  SRR4302532.398195/1‑94 (MQ=60)
                                     GTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACA                                                          >  SRR4302532.5953691/1‑94 (MQ=60)
                                      TTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACAT                                                         <  SRR4302532.6205632/94‑1 (MQ=60)
                                       TACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATA                                                        >  SRR4302532.1168815/1‑94 (MQ=60)
                                       TACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATA                                                        >  SRR4302532.3509106/1‑94 (MQ=60)
                                        ACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAG                                                       <  SRR4302532.2129318/94‑1 (MQ=60)
                                         CTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGG                                                      >  SRR4302532.5278200/1‑94 (MQ=60)
                                         CTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGG                                                      >  SRR4302532.2842935/1‑94 (MQ=60)
                                          TATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGC                                                     <  SRR4302532.6250495/94‑1 (MQ=60)
                                           ATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCA                                                    <  SRR4302532.1737826/94‑1 (MQ=60)
                                           ATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCA                                                    >  SRR4302532.3726653/1‑94 (MQ=60)
                                            TTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCAC                                                   <  SRR4302532.4952035/94‑1 (MQ=60)
                                             TGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACC                                                  >  SRR4302532.4626310/1‑94 (MQ=60)
                                              GTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCG                                                 <  SRR4302532.642949/94‑1 (MQ=60)
                                               TAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGT                                                >  SRR4302532.5594410/1‑94 (MQ=60)
                                                AATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTT                                               >  SRR4302532.4238351/1‑94 (MQ=60)
                                                  TCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCT                                             <  SRR4302532.2560978/94‑1 (MQ=60)
                                                   ccgcccatcgatgttgcaccattccacatcggGCCATGGATCGGGTTGGCAAAACCGTCAACTTTCACCAACCCATCAACATAGGCACCGTTCT                                             <  SRR4302532.5524456/62‑1 (MQ=56)
                                                     CC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGAT                                          <  SRR4302532.2726398/94‑1 (MQ=60)
                                                      C‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCCTCAACATAGGCCCCGCTCTGATG                                         >  SRR4302532.144548/1‑94 (MQ=60)
                                                      C‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATG                                         >  SRR4302532.2618784/1‑94 (MQ=60)
                                                      C‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATG                                         >  SRR4302532.2617791/1‑94 (MQ=60)
                                                        AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGC                                        <  SRR4302532.1921699/94‑1 (MQ=60)
                                                         AACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCT                                       <  SRR4302532.1731103/94‑1 (MQ=60)
                                                         AACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGCTCTGATGCT                                       >  SRR4302532.1440566/1‑94 (MQ=60)
                                                            GCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCGCCACCCCATCAACATAGGCACCGTTCTGATGCTCCC                                    <  SRR4302532.863040/94‑1 (MQ=60)
                                                            GCTGTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCC                                    <  SRR4302532.4581140/94‑1 (MQ=60)
                                                               GTTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAAC                                 <  SRR4302532.496079/94‑1 (MQ=60)
                                                                TTGCCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACC                                <  SRR4302532.6225749/94‑1 (MQ=60)
                                                                  TCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGG                              <  SRR4302532.2165377/94‑1 (MQ=60)
                                                                   CCCCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGC                             >  SRR4302532.225933/1‑94 (MQ=60)
                                                                    CCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCA                            >  SRR4302532.1545620/1‑94 (MQ=60)
                                                                     CCATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCAT                           <  SRR4302532.3294825/94‑1 (MQ=60)
                                                                      CATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATA                          <  SRR4302532.6332423/94‑1 (MQ=60)
                                                                      CATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATA                          <  SRR4302532.1860012/94‑1 (MQ=60)
                                                                      CATTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATA                          <  SRR4302532.5040696/94‑1 (MQ=60)
                                                                        TTACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG                        >  SRR4302532.1866841/1‑94 (MQ=60)
                                                                          ACTCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCC                      <  SRR4302532.3901345/94‑1 (MQ=60)
                                                                           CTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCC                     >  SRR4302532.1875032/1‑94 (MQ=60)
                                                                            TCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCC                    <  SRR4302532.3549069/94‑1 (MQ=60)
                                                                            TCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCTCAACTGGCATAATCCCC                    >  SRR4302532.5670872/1‑94 (MQ=60)
                                                                            TCATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCC                    <  SRR4302532.2803101/94‑1 (MQ=60)
                                                                             CATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGCCACCGTTCTGATGCTCCCAACCGGCATACGCCCCC                   >  SRR4302532.2057559/1‑94 (MQ=60)
                                                                              ATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCA                  >  SRR4302532.2218173/1‑94 (MQ=60)
                                                                              ATCTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCA                  <  SRR4302532.3096088/94‑1 (MQ=60)
                                                                              ATCGTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCA                  <  SRR4302532.2086280/94‑1 (MQ=60)
                                                                                CTTGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGG                <  SRR4302532.5324960/94‑1 (MQ=60)
                                                                                  TGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGT              <  SRR4302532.2819466/94‑1 (MQ=60)
                                                                                  TGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGT              >  SRR4302532.5630551/1‑94 (MQ=60)
                                                                                  TGCCATGGATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCT‑CCAACCGGCATAAGCCCCCAGGGTA             <  SRR4302532.211321/94‑1 (MQ=60)
                                                                                         GATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTA       <  SRR4302532.5990363/94‑1 (MQ=60)
                                                                                         GATGGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGATA       >  SRR4302532.2531456/1‑94 (MQ=60)
                                                                                            GGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCG    <  SRR4302532.4669034/94‑1 (MQ=60)
                                                                                            GGCGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCG    <  SRR4302532.2672731/94‑1 (MQ=60)
                                                                                              CGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGAT  >  SRR4302532.2184036/1‑94 (MQ=60)
                                                                                              CGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGAT  <  SRR4302532.1960468/94‑1 (MQ=60)
                                                                                              |                                                                                             
CCCAACGGAACCCGCTCTCAACATGAGCACCCGCGCCGTTACTATTGTAATCGCC‑AAACGCTGTTGCCCCATTACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGAT  >  NC_000913/2284820‑2285006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑