Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCGTTAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTACTTCATG  >  NC_000913/2407233‑2407418
                                                                                            |                                                                                             
CCGTTAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCACATCTGAAATGTCTGGAAGAGC                                                                                              >  SRR4302532.6332996/1‑94 (MQ=60)
 CGTTAATTGACGAGCATGCATATAGCGATTAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACT                                                                                             <  SRR4302532.962059/94‑1 (MQ=60)
 CGTTAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACT                                                                                             >  SRR4302532.2059421/1‑94 (MQ=60)
 CGTTAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCACATCTGAAATGTCTGGAAGAGCT                                                                                             <  SRR4302532.3183796/94‑1 (MQ=60)
  GTTAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTC                                                                                            >  SRR4302532.111108/1‑94 (MQ=60)
  GTTAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTC                                                                                            >  SRR4302532.111109/1‑94 (MQ=60)
  GTTAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTC                                                                                            <  SRR4302532.2242385/94‑1 (MQ=60)
   TTAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCG                                                                                           <  SRR4302532.1066327/94‑1 (MQ=60)
    TAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGC                                                                                          >  SRR4302532.550501/1‑94 (MQ=60)
     AATTGACGAGCATGCATATAGCGATGAAGAAAAAGCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCG                                                                                         <  SRR4302532.3020164/94‑1 (MQ=60)
      ATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGG                                                                                        <  SRR4302532.3499053/94‑1 (MQ=60)
      ATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGG                                                                                        <  SRR4302532.2772031/94‑1 (MQ=60)
             AGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAA                                                                                 >  SRR4302532.300857/1‑94 (MQ=60)
              GCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAAT                                                                                <  SRR4302532.3428835/94‑1 (MQ=60)
                ATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAA                                                                              >  SRR4302532.890344/1‑94 (MQ=60)
                ATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCACATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAA                                                                              >  SRR4302532.1918001/1‑94 (MQ=60)
                 TGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAAT                                                                             >  SRR4302532.3022750/1‑94 (MQ=60)
                 TCCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAAT                                                                             <  SRR4302532.2205899/94‑1 (MQ=60)
                   CATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGA                                                                           >  SRR4302532.479768/1‑94 (MQ=60)
                   CATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGA                                                                           <  SRR4302532.4873882/94‑1 (MQ=60)
                   CATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGA                                                                           >  SRR4302532.5944007/1‑94 (MQ=60)
                    ATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAA                                                                          >  SRR4302532.3027921/1‑94 (MQ=60)
                    ATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAA                                                                          <  SRR4302532.1152146/94‑1 (MQ=60)
                    ATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAA                                                                          >  SRR4302532.898029/1‑94 (MQ=60)
                    ATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCACATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAA                                                                          >  SRR4302532.3704441/1‑94 (MQ=60)
                      ATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATT                                                                        >  SRR4302532.3931889/1‑94 (MQ=60)
                      ATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATT                                                                        >  SRR4302532.1456864/1‑94 (MQ=60)
                       TAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTC                                                                       <  SRR4302532.5716947/94‑1 (MQ=60)
                       TAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCACATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTC                                                                       <  SRR4302532.2597957/94‑1 (MQ=60)
                        AGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCT                                                                      <  SRR4302532.963049/94‑1 (MQ=60)
                         GCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTT                                                                     <  SRR4302532.1329891/94‑1 (MQ=60)
                         GCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCACATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTT                                                                     <  SRR4302532.39782/94‑1 (MQ=60)
                          CGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTG                                                                    >  SRR4302532.4910471/1‑94 (MQ=60)
                          CGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTG                                                                    >  SRR4302532.3297837/1‑94 (MQ=60)
                          CGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTG                                                                    <  SRR4302532.4988903/94‑1 (MQ=60)
                          CGATGAAGAAAAATCGCTGGTGAAACAGGAAGATGCACTGTGTGCATATCTGAAATGTCGGGAAGAACTCGCGGCCGGAAATAATAAATTCTTG                                                                    >  SRR4302532.4112811/1‑94 (MQ=60)
                          CGATGAAGAAAAATCGCGGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCCCGGCCGGGAATAATGAATTCTTG                                                                    >  SRR4302532.4031291/1‑94 (MQ=60)
                           GATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGC                                                                   >  SRR4302532.5423632/1‑94 (MQ=60)
                           GATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGC                                                                   <  SRR4302532.3474434/94‑1 (MQ=60)
                           GATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGC                                                                   >  SRR4302532.180930/1‑94 (MQ=60)
                           GATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGC                                                                   >  SRR4302532.2237654/1‑94 (MQ=60)
                            ATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCT                                                                  >  SRR4302532.1196987/1‑94 (MQ=60)
                            ATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCACATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCT                                                                  >  SRR4302532.67629/1‑94 (MQ=60)
                             TGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTG                                                                 <  SRR4302532.4082546/94‑1 (MQ=60)
                             TGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTG                                                                 <  SRR4302532.6000093/94‑1 (MQ=60)
                                  AAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAA                                                            <  SRR4302532.4999122/94‑1 (MQ=60)
                                     AATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAAC                                                         <  SRR4302532.6177528/94‑1 (MQ=60)
                                      ATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACG                                                        <  SRR4302532.3369275/94‑1 (MQ=60)
                                      ATCGCTGGTGAAACAGGCAGATGCACTGTGTGCACATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACG                                                        <  SRR4302532.1949672/94‑1 (MQ=60)
                                        CGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCG                                                      <  SRR4302532.2200686/94‑1 (MQ=60)
                                        CGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCG                                                      >  SRR4302532.2010655/1‑94 (MQ=60)
                                        CGCTGGTGAAACAGGCAGATGCACTGTGTGCACATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCG                                                      <  SRR4302532.3500267/94‑1 (MQ=60)
                                         GCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGA                                                     >  SRR4302532.607079/1‑94 (MQ=60)
                                         GCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGA                                                     >  SRR4302532.2307920/1‑94 (MQ=60)
                                          CTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGAC                                                    <  SRR4302532.1841176/94‑1 (MQ=60)
                                           TGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACT                                                   >  SRR4302532.848601/1‑94 (MQ=60)
                                           TGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACT                                                   >  SRR4302532.5712/1‑94 (MQ=60)
                                            GGTGAAACAGGCAGATGCACTGTGTGCACATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTG                                                  <  SRR4302532.5835350/94‑1 (MQ=60)
                                               GAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAA                                               <  SRR4302532.1318319/94‑1 (MQ=60)
                                                 AACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGC                                             >  SRR4302532.1851712/1‑94 (MQ=60)
                                                    AGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGAC                                          <  SRR4302532.2375848/94‑1 (MQ=60)
                                                    AGGCAGATGCACTGTGTGCATATCTGAAATGTCAGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGAC                                          <  SRR4302532.2595229/94‑1 (MQ=60)
                                                        AGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTT                                      <  SRR4302532.5364677/94‑1 (MQ=60)
                                                        AGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTT                                      >  SRR4302532.4995795/1‑94 (MQ=60)
                                                         GATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTG                                     <  SRR4302532.3634659/94‑1 (MQ=60)
                                                          ATGCACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGA                                    >  SRR4302532.2782364/1‑94 (MQ=60)
                                                           TGCACTGTGTGCACATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAA                                   <  SRR4302532.3959359/94‑1 (MQ=60)
                                                             CACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGC                                 <  SRR4302532.5885814/94‑1 (MQ=60)
                                                             CACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGC                                 <  SRR4302532.820215/94‑1 (MQ=60)
                                                             CACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGC                                 <  SRR4302532.826876/94‑1 (MQ=60)
                                                              ACTGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCG                                >  SRR4302532.395913/1‑94 (MQ=60)
                                                              ACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCG                                <  SRR4302532.3345842/94‑1 (MQ=60)
                                                               CTGTGTGCACATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGGGC                               >  SRR4302532.3863428/1‑94 (MQ=60)
                                                                TGTGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCATGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCG                              <  SRR4302532.1427114/94‑1 (MQ=60)
                                                                TGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCG                              <  SRR4302532.6021879/94‑1 (MQ=60)
                                                                TGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCG                              <  SRR4302532.1125494/94‑1 (MQ=60)
                                                                 GTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGT                             >  SRR4302532.2623503/1‑94 (MQ=60)
                                                                  TGTGCATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTC                            >  SRR4302532.2257181/1‑94 (MQ=60)
                                                                    TGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGCCGCTTGAAGCGCGTCGC                          >  SRR4302532.547791/1‑94 (MQ=60)
                                                                    TGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGC                          >  SRR4302532.377042/1‑94 (MQ=60)
                                                                     GCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCA                         <  SRR4302532.1211132/94‑1 (MQ=60)
                                                                     GCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCA                         <  SRR4302532.3433244/94‑1 (MQ=60)
                                                                      CATATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAG                        >  SRR4302532.1847465/1‑94 (MQ=60)
                                                                         ATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGGCTGGAAGCGACGCTTGAAGCGCGTCGCAGCCA                     <  SRR4302532.1749476/94‑1 (MQ=60)
                                                                         ATCTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCA                     >  SRR4302532.5227457/1‑94 (MQ=60)
                                                                           CTGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGG                   <  SRR4302532.5395135/94‑1 (MQ=60)
                                                                           CTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGG                   <  SRR4302532.242516/94‑1 (MQ=60)
                                                                            TGAAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGA                  >  SRR4302532.4980293/1‑94 (MQ=60)
                                                                            TGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGA                  <  SRR4302532.5576670/94‑1 (MQ=60)
                                                                              AAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGA                <  SRR4302532.3012039/94‑1 (MQ=60)
                                                                              AAATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGA                >  SRR4302532.5858848/1‑94 (MQ=60)
                                                                               AATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGAT               <  SRR4302532.449928/94‑1 (MQ=60)
                                                                               AATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGAT               <  SRR4302532.6000467/94‑1 (MQ=60)
                                                                                ATGTCTGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATG              <  SRR4302532.3461671/94‑1 (MQ=60)
                                                                                ATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTTAAGCGCGTCGCAGCCAGGAGATG              >  SRR4302532.3643065/1‑94 (MQ=60)
                                                                                  GTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGA            >  SRR4302532.3925997/1‑94 (MQ=60)
                                                                                  GTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGA            >  SRR4302532.2868548/1‑94 (MQ=60)
                                                                                  GTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACACTTGAAGCGCGTCGCAGCCAGGAGATGGA            <  SRR4302532.5340765/94‑1 (MQ=60)
                                                                                   TCTGGAAGAGCTCGCGGCCTGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGAC           <  SRR4302532.1977524/94‑1 (MQ=60)
                                                                                     TGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTA         >  SRR4302532.1908459/1‑94 (MQ=60)
                                                                                     TGGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTA         >  SRR4302532.5535739/1‑94 (MQ=60)
                                                                                     TGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTA         <  SRR4302532.1256983/94‑1 (MQ=60)
                                                                                      GGAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTAC        >  SRR4302532.4342429/1‑94 (MQ=60)
                                                                                       GAAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTACT       <  SRR4302532.2752002/94‑1 (MQ=60)
                                                                                        AAGAGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTACTT      <  SRR4302532.1219376/94‑1 (MQ=60)
                                                                                        AAGAGCTCGCGGCCGGAAATAATGAATTCTTGCT‑GCAAAAACGCGACTTGAAGCGACGCTTGAAGCGCGTCGCAACCAGGGGATGGACTACGTC     >  SRR4302532.5669601/1‑94 (MQ=60)
                                                                                           AGCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTACTTCAT   <  SRR4302532.5251267/94‑1 (MQ=60)
                                                                                            GCTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTACTTCATG  >  SRR4302532.3519757/1‑94 (MQ=60)
                                                                                            |                                                                                             
CCGTTAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTACTTCATG  >  NC_000913/2407233‑2407418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑