Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGTTTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCT  >  NC_000913/2460137‑2460322
                                                                                             |                                                                                            
CGTTTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGG                                                                                              >  SRR4302532.4874178/1‑94 (MQ=60)
CGTTTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGG                                                                                              >  SRR4302532.1790360/1‑94 (MQ=60)
CGTTTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACCCTGAACCTGCCTGAAATGTGGGAAGC                                                                                              >  SRR4302532.722319/1‑94 (MQ=60)
 GTTTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTG                                                                                             >  SRR4302532.3413138/1‑94 (MQ=60)
 GTTTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCG                                                                                             <  SRR4302532.4843476/94‑1 (MQ=60)
  TTTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGT                                                                                            >  SRR4302532.578077/1‑94 (MQ=60)
   TTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTC                                                                                           >  SRR4302532.1004721/1‑94 (MQ=60)
   TTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTC                                                                                           <  SRR4302532.2037594/94‑1 (MQ=60)
    TAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCA                                                                                          >  SRR4302532.345692/1‑94 (MQ=60)
    TAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCA                                                                                          >  SRR4302532.1699932/1‑94 (MQ=60)
    TAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCA                                                                                          <  SRR4302532.1148891/94‑1 (MQ=60)
    TAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCA                                                                                          >  SRR4302532.4882873/1‑94 (MQ=60)
      ATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGG                                                                                        <  SRR4302532.6339965/94‑1 (MQ=60)
        AACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTT                                                                                      >  SRR4302532.843999/1‑94 (MQ=60)
        AACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTT                                                                                      >  SRR4302532.2385249/1‑94 (MQ=60)
          CTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTAT                                                                                    >  SRR4302532.5244293/1‑94 (MQ=60)
          CTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTAT                                                                                    >  SRR4302532.5244292/1‑94 (MQ=60)
          CTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTAT                                                                                    >  SRR4302532.1656403/1‑94 (MQ=60)
          CTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTAT                                                                                    <  SRR4302532.5193111/94‑1 (MQ=60)
          CTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTAT                                                                                    <  SRR4302532.4126700/94‑1 (MQ=60)
            ACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAA                                                                                  <  SRR4302532.4981697/94‑1 (MQ=60)
             CGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAAC                                                                                 <  SRR4302532.514151/94‑1 (MQ=60)
             CGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAAC                                                                                 <  SRR4302532.514152/94‑1 (MQ=60)
              GGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACC                                                                                <  SRR4302532.4994932/94‑1 (MQ=60)
              GGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACC                                                                                <  SRR4302532.1559422/94‑1 (MQ=60)
              GGTTGGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACC                                                                                <  SRR4302532.2028356/94‑1 (MQ=60)
                TTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGT                                                                              >  SRR4302532.1847703/1‑94 (MQ=60)
                 TTGCCAATTCCTCCCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTG                                                                             <  SRR4302532.1245969/94‑1 (MQ=60)
                  TGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGT                                                                            <  SRR4302532.2293166/94‑1 (MQ=60)
                   TCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTT                                                                           <  SRR4302532.2358474/94‑1 (MQ=60)
                   GCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTT                                                                           >  SRR4302532.3744537/1‑94 (MQ=60)
                   GCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTT                                                                           >  SRR4302532.2386951/1‑94 (MQ=60)
                   GCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACACTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTT                                                                           >  SRR4302532.5922134/1‑94 (MQ=60)
                     CAATTCCTACCGGGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGA                                                                         <  SRR4302532.400108/94‑1 (MQ=60)
                     CAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGA                                                                         >  SRR4302532.4780381/1‑94 (MQ=60)
                     CAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGA                                                                         >  SRR4302532.3995029/1‑94 (MQ=60)
                     CAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGA                                                                         <  SRR4302532.1076719/94‑1 (MQ=60)
                       ATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGGTATAACCGTGTTGATC                                                                       >  SRR4302532.4195086/1‑94 (MQ=60)
                       ATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATC                                                                       <  SRR4302532.198080/94‑1 (MQ=60)
                          CCTGCCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCAC                                                                    >  SRR4302532.4175960/1‑94 (MQ=60)
                           CTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACA                                                                   >  SRR4302532.6128344/1‑94 (MQ=60)
                            TACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAG                                                                  <  SRR4302532.5908775/94‑1 (MQ=60)
                            TACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAG                                                                  >  SRR4302532.1306545/1‑94 (MQ=60)
                            TACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAG                                                                  >  SRR4302532.3583109/1‑94 (MQ=60)
                            TACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAG                                                                  >  SRR4302532.2979820/1‑94 (MQ=60)
                            CACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAG                                                                  <  SRR4302532.4321895/94‑1 (MQ=60)
                             ACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTTATCCACAGT                                                                 <  SRR4302532.2424149/94‑1 (MQ=60)
                             ACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGT                                                                 <  SRR4302532.5441464/94‑1 (MQ=60)
                             ACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGT                                                                 >  SRR4302532.454358/1‑94 (MQ=60)
                               CGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGG                                                               >  SRR4302532.2739972/1‑94 (MQ=60)
                               CGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGG                                                               <  SRR4302532.4047397/94‑1 (MQ=60)
                                GCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGG                                                              <  SRR4302532.497561/94‑1 (MQ=60)
                                   ACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGA                                                           >  SRR4302532.949880/1‑94 (MQ=60)
                                     AGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATT                                                         >  SRR4302532.3634395/1‑94 (MQ=60)
                                       GTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCA                                                       <  SRR4302532.5577423/94‑1 (MQ=60)
                                       GTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCA                                                       <  SRR4302532.4011625/94‑1 (MQ=60)
                                         GCCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACT                                                     <  SRR4302532.2462263/94‑1 (MQ=60)
                                          GCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTA                                                    <  SRR4302532.1986327/94‑1 (MQ=60)
                                           CGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTAT                                                   >  SRR4302532.357225/1‑94 (MQ=60)
                                            GCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATA                                                  <  SRR4302532.2953374/94‑1 (MQ=60)
                                              AACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGC                                                >  SRR4302532.3371497/1‑94 (MQ=60)
                                              AACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGC                                                <  SRR4302532.5337825/94‑1 (MQ=60)
                                               ACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCC                                               <  SRR4302532.6236277/94‑1 (MQ=60)
                                                   AATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGC                                           >  SRR4302532.2624959/1‑94 (MQ=60)
                                                   AATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGC                                           <  SRR4302532.673546/94‑1 (MQ=60)
                                                    ATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCT                                          <  SRR4302532.6293369/94‑1 (MQ=60)
                                                    ATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCT                                          >  SRR4302532.3510796/1‑94 (MQ=60)
                                                      CGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTA                                        <  SRR4302532.1334303/94‑1 (MQ=60)
                                                         GTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACAC                                     <  SRR4302532.4516645/94‑1 (MQ=60)
                                                          TTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACC                                    >  SRR4302532.4715193/1‑94 (MQ=60)
                                                          TTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACC                                    <  SRR4302532.5605757/94‑1 (MQ=60)
                                                          TTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACC                                    <  SRR4302532.561165/94‑1 (MQ=60)
                                                          TTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACC                                    <  SRR4302532.3663453/94‑1 (MQ=60)
                                                          TTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACC                                    >  SRR4302532.1617266/1‑94 (MQ=60)
                                                           TATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCA                                   <  SRR4302532.5149781/94‑1 (MQ=60)
                                                           TATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCA                                   <  SRR4302532.1408418/94‑1 (MQ=60)
                                                            ATCTGACGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAG                                  <  SRR4302532.3065096/94‑1 (MQ=60)
                                                                 CCGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATACCCGTGTTGATCCACCGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGA                             <  SRR4302532.1330922/94‑1 (MQ=60)
                                                                 ACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGA                             <  SRR4302532.1231130/94‑1 (MQ=60)
                                                                  CGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAG                            <  SRR4302532.1786996/94‑1 (MQ=60)
                                                                  CGCTGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAG                            >  SRR4302532.6262980/1‑94 (MQ=60)
                                                                     TGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCA                         >  SRR4302532.1451857/1‑94 (MQ=60)
                                                                     TGAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCA                         <  SRR4302532.5185496/94‑1 (MQ=60)
                                                                      GAACCTGCCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAG                        <  SRR4302532.5715312/94‑1 (MQ=60)
                                                                       AACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGT                       >  SRR4302532.5525590/1‑94 (MQ=60)
                                                                             CCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGC                 >  SRR4302532.2218471/1‑94 (MQ=60)
                                                                             CCTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGC                 >  SRR4302532.3785739/1‑94 (MQ=60)
                                                                              CTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCA                >  SRR4302532.5330320/1‑94 (MQ=60)
                                                                              CTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCA                >  SRR4302532.4921087/1‑94 (MQ=60)
                                                                              CTGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCA                >  SRR4302532.676257/1‑94 (MQ=60)
                                                                               TGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACGCCAGCTGGAGTCAGTTCCAGCAG               >  SRR4302532.4638586/1‑94 (MQ=60)
                                                                               TGAAATGTGGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAG               <  SRR4302532.835544/94‑1 (MQ=60)
                                                                                 AAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCT             >  SRR4302532.3828130/1‑94 (MQ=60)
                                                                                  AATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTG            >  SRR4302532.2430587/1‑94 (MQ=60)
                                                                                      TGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAG        >  SRR4302532.3764720/1‑94 (MQ=60)
                                                                                       GGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGC       >  SRR4302532.4615193/1‑94 (MQ=60)
                                                                                       GGGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACTAGCTGGAGTCAGTTCCAGCCGCTGAAAGT       >  SRR4302532.1713765/1‑94 (MQ=60)
                                                                                        GGAAGCGTCAGGTTATAGCCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGGCACTTCCAGCAGCTCAAAGCA      >  SRR4302532.2574490/1‑94 (MQ=60)
                                                                                        GGAAGCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGCTTCACTATAGCCTGGCTTACACCACCTGGAGTCAGTTCCAGCAGCTGACAGCG      >  SRR4302532.2574491/1‑94 (MQ=60)
                                                                                            GTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCT  <  SRR4302532.4513888/94‑1 (MQ=60)
                                                                                            GCGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCT  >  SRR4302532.6326181/1‑94 (MQ=60)
                                                                                             |                                                                                            
CGTTTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCT  >  NC_000913/2460137‑2460322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑