Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CACCGAAAGATAGTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCCGCGGG  >  NC_000913/2592404‑2592587
                                                                                             |                                                                                          
CACCGAAAGATAGTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCC                                                                                            <  SRR4302532.3048429/94‑1 (MQ=60)
   CGAAAGATAGTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATC                                                                                         <  SRR4302532.4064932/94‑1 (MQ=60)
   CGAAAGATAGTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATC                                                                                         >  SRR4302532.4135340/1‑94 (MQ=60)
   CGAAAGATAGTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCGATC                                                                                         >  SRR4302532.6327556/1‑94 (MQ=60)
    GAAAGATAGTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCC                                                                                        <  SRR4302532.1792010/94‑1 (MQ=60)
    GAAAGATAGTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATAC                                                                                        >  SRR4302532.2287146/1‑94 (MQ=60)
        GATAGTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCT                                                                                    <  SRR4302532.2636502/94‑1 (MQ=60)
         ATAGTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTG                                                                                   >  SRR4302532.2903421/1‑94 (MQ=60)
          TAGTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGA                                                                                  <  SRR4302532.4134266/94‑1 (MQ=60)
            GTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACC                                                                                <  SRR4302532.5001899/94‑1 (MQ=60)
            GTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACC                                                                                <  SRR4302532.4227581/94‑1 (MQ=60)
              cgcggcattgcggaaATTGCAAAGGAACAGAAATAAGTTACCGCCCTGTGCCTTCCCGCTGATGAGACGGATGAACTGCTATCCGGCTGACCCG                                                                              >  SRR4302532.4865379/16‑94 (MQ=60)
              CGAGGTCTTGCGTATATTGCAAAGCACCAGCCATAAGTTGGCGCCCTGTGCCTTCCCGATGCCGAGCCGGATGAACTGCCATCCGGCTGACCCC                                                                              >  SRR4302532.1310122/1‑94 (MQ=60)
              CGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCG                                                                              >  SRR4302532.1310121/1‑94 (MQ=60)
               GAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGC                                                                             >  SRR4302532.5838820/1‑94 (MQ=60)
                AGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCC                                                                            <  SRR4302532.2727552/94‑1 (MQ=60)
                AGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCC                                                                            <  SRR4302532.929905/94‑1 (MQ=60)
                  GTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGT                                                                          >  SRR4302532.1246995/1‑94 (MQ=60)
                    CTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCC                                                                        >  SRR4302532.1022180/1‑94 (MQ=60)
                    CTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCC                                                                        >  SRR4302532.6116149/1‑94 (MQ=60)
                     TTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCA                                                                       >  SRR4302532.1461904/1‑94 (MQ=60)
                        CGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGC                                                                    >  SRR4302532.1675730/1‑94 (MQ=60)
                         GTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCCCGCA                                                                   >  SRR4302532.3888009/1‑94 (MQ=60)
                         GTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCA                                                                   <  SRR4302532.6358036/94‑1 (MQ=60)
                           ATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAAT                                                                 >  SRR4302532.2303620/1‑94 (MQ=60)
                           ATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCTACGCCAT                                                                 >  SRR4302532.2868302/1‑94 (MQ=60)
                            TATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATG                                                                <  SRR4302532.1825919/94‑1 (MQ=60)
                             ATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGT                                                               >  SRR4302532.2352187/1‑94 (MQ=60)
                              TTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTC                                                              <  SRR4302532.1986648/94‑1 (MQ=60)
                               TGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCG                                                             >  SRR4302532.5752977/1‑94 (MQ=60)
                               TGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCG                                                             <  SRR4302532.6242816/94‑1 (MQ=60)
                                 CAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCC                                                           >  SRR4302532.5042240/1‑94 (MQ=60)
                                 CAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCC                                                           >  SRR4302532.5332206/1‑94 (MQ=60)
                                  AAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCG                                                          >  SRR4302532.4172389/1‑94 (MQ=60)
                                     GCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCA                                                       <  SRR4302532.1147298/94‑1 (MQ=60)
                                      CACTAACAATAAGTTGCAGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACtccccatccccgcaaacttgccgctat                                                      >  SRR4302532.1972397/1‑67 (MQ=60)
                                       CCCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGT                                                     <  SRR4302532.1727731/94‑1 (MQ=60)
                                         CAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGG                                                   <  SRR4302532.2087913/94‑1 (MQ=60)
                                         CAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGG                                                   >  SRR4302532.378582/1‑94 (MQ=60)
                                         CAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGCGG                                                   >  SRR4302532.489273/1‑94 (MQ=60)
                                           GCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGAT                                                 <  SRR4302532.6180259/94‑1 (MQ=60)
                                             AATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTG                                               <  SRR4302532.4459579/94‑1 (MQ=60)
                                             AATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTG                                               >  SRR4302532.2087752/1‑94 (MQ=60)
                                             AATAAGTTGCCCCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTG                                               <  SRR4302532.6123044/94‑1 (MQ=60)
                                              ATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGT                                              >  SRR4302532.1090672/1‑94 (MQ=60)
                                                AAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTG                                            >  SRR4302532.311480/1‑94 (MQ=60)
                                                 AGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGC                                           <  SRR4302532.857142/94‑1 (MQ=60)
                                                    TGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGT                                        >  SRR4302532.3881140/1‑94 (MQ=60)
                                                    TGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGT                                        <  SRR4302532.5778545/94‑1 (MQ=60)
                                                     GCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTG                                       <  SRR4302532.1577518/94‑1 (MQ=60)
                                                      CCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGC                                      <  SRR4302532.1261713/94‑1 (MQ=60)
                                                       CGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCG                                     >  SRR4302532.5876514/1‑94 (MQ=60)
                                                       CGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCG                                     <  SRR4302532.5401022/94‑1 (MQ=60)
                                                        CCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGC                                    <  SRR4302532.1709214/94‑1 (MQ=60)
                                                           CTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGC                                 >  SRR4302532.1991265/1‑94 (MQ=60)
                                                             GTGCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCA                               <  SRR4302532.3940508/94‑1 (MQ=60)
                                                               GCCTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGC                             <  SRR4302532.2898457/94‑1 (MQ=60)
                                                                 CTTCCCGCTGCCGAGCCGGATGAACTGCCACCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGA                           <  SRR4302532.296437/94‑1 (MQ=60)
                                                                 CTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGC                           >  SRR4302532.3945457/1‑94 (MQ=60)
                                                                 CTTCCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGA                           <  SRR4302532.4850654/94‑1 (MQ=60)
                                                                   TCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACT                         <  SRR4302532.5971735/94‑1 (MQ=60)
                                                                   TCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACT                         <  SRR4302532.2456830/94‑1 (MQ=60)
                                                                   TCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACT                         <  SRR4302532.5429668/94‑1 (MQ=60)
                                                                   CCCCGCTGACGAGCCGGATGACCTGCTATCCGGCTGACCCGCCGTCCACGCAAGGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACT                         <  SRR4302532.1551750/94‑1 (MQ=60)
                                                                    CCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGCCCCGCCGTCCACGCAATGTCGCCGCCAGTGGAGTGTTGCCGTGCGCCGCCAGCGACTG                        <  SRR4302532.1181654/94‑1 (MQ=60)
                                                                    CCCGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTG                        >  SRR4302532.5259379/1‑94 (MQ=60)
                                                                     CCGCTGCCGACCGGGAAGAACTGCCATCCGGCGCACCCGCAGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGG                       <  SRR4302532.3086991/94‑1 (MQ=60)
                                                                      CGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGG                      >  SRR4302532.4079548/1‑94 (MQ=60)
                                                                      CGCTGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGG                      <  SRR4302532.5446512/94‑1 (MQ=60)
                                                                       GCTGACGAGCCGGATGAACTGCCATCCGGCTGTCCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGC                     >  SRR4302532.5847496/1‑94 (MQ=60)
                                                                        CTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCC                    >  SRR4302532.5074755/1‑94 (MQ=60)
                                                                         TGACGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCC                   >  SRR4302532.3279739/1‑94 (MQ=60)
                                                                            CGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCA                <  SRR4302532.1849815/94‑1 (MQ=60)
                                                                            CGAGCCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCA                >  SRR4302532.795839/1‑94 (MQ=60)
                                                                                CCGGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGAATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATT            >  SRR4302532.4474088/1‑94 (MQ=60)
                                                                                  GGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGGGCCGCCAGGGCCTGGGCCACCAGATTAC          >  SRR4302532.1415764/1‑94 (MQ=60)
                                                                                  GGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTAC          >  SRR4302532.2366059/1‑94 (MQ=60)
                                                                                  GGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTAC          >  SRR4302532.1415765/1‑94 (MQ=60)
                                                                                  GGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTAC          <  SRR4302532.3978461/94‑1 (MQ=60)
                                                                                  GGATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTAC          >  SRR4302532.3149130/1‑94 (MQ=60)
                                                                                    ATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCC        <  SRR4302532.2926115/94‑1 (MQ=60)
                                                                                    ATGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCC        >  SRR4302532.3931899/1‑94 (MQ=60)
                                                                                     TGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCaacaggcgattcttcccttcccccgccacccactgggccaccaggttactcc       >  SRR4302532.1532081/1‑42 (MQ=60)
                                                                                     TGAACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCC       <  SRR4302532.4328866/94‑1 (MQ=60)
                                                                                     TGAACTCCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCC       <  SRR4302532.1605131/94‑1 (MQ=60)
                                                                                      GAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCCG      <  SRR4302532.2982418/94‑1 (MQ=60)
                                                                                       AACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCCGG     >  SRR4302532.22705/1‑94 (MQ=60)
                                                                                        ACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCCGCG    <  SRR4302532.4422127/94‑1 (MQ=60)
                                                                                        ACTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCCGCG    <  SRR4302532.647277/94‑1 (MQ=60)
                                                                                         CTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCCGCGG   <  SRR4302532.1911093/94‑1 (MQ=60)
                                                                                         CTGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCCGCGG   >  SRR4302532.1002528/1‑94 (MQ=60)
                                                                                         CTGCCACCCGGCCGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTGGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCCGCGG   <  SRR4302532.1911092/94‑1 (MQ=60)
                                                                                          TGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCCGCGGG  >  SRR4302532.3773000/1‑94 (MQ=60)
                                                                                          TGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCCGCGGG  >  SRR4302532.2773844/1‑94 (MQ=60)
                                                                                          TGCCATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTCGGCCACCtgaatacaccgccgg  >  SRR4302532.6239413/1‑79 (MQ=60)
                                                                                             |                                                                                          
CACCGAAAGATAGTCGAGGTCTTGCGTATATTGCAAAGCACCAGCAATAAGTTGCCGCCCTGTGCCTTCCCGCTGACGAGCCGGATGAACTGCTATCCGGCTGACCCGCCGTCCACGCAATGTCGCCGCCAGTGGATTGTTGCCGTGCGCCGCCAGCGACTGGGCCACCAGATTACCCCGCGGG  >  NC_000913/2592404‑2592587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑