Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCGACTGTGGATC  >  NC_000913/2695410‑2695596
                                                                                             |                                                                                             
AATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATG                                                                                               >  SRR4302532.3049420/1‑94 (MQ=60)
AATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATA                                                                                               >  SRR4302532.4964531/1‑94 (MQ=60)
AATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATA                                                                                               <  SRR4302532.1785982/94‑1 (MQ=60)
 ATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGC                                                                                              >  SRR4302532.1271095/1‑94 (MQ=60)
   TTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCC                                                                                            <  SRR4302532.391285/94‑1 (MQ=60)
   TTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCC                                                                                            <  SRR4302532.3614759/94‑1 (MQ=60)
   TTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCC                                                                                            <  SRR4302532.5113369/94‑1 (MQ=60)
   TTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCC                                                                                            <  SRR4302532.3803835/94‑1 (MQ=60)
     CCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGG                                                                                          >  SRR4302532.3104042/1‑94 (MQ=60)
     CCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGG                                                                                          >  SRR4302532.3728792/1‑94 (MQ=60)
      CTGGAGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGA                                                                                         >  SRR4302532.4386739/1‑94 (MQ=60)
       TGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTTATGCCCGCAT                                                                                        >  SRR4302532.565989/1‑94 (MQ=60)
       TGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGAT                                                                                        >  SRR4302532.4733931/1‑94 (MQ=60)
       TGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGAT                                                                                        <  SRR4302532.2846350/94‑1 (MQ=60)
       TGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGAT                                                                                        <  SRR4302532.179713/94‑1 (MQ=60)
        GGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATG                                                                                       >  SRR4302532.1774330/1‑94 (MQ=60)
         GCGGCGCATGCGAAAGAAGTCACTGAGCAGCGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGA                                                                                      <  SRR4302532.5751833/94‑1 (MQ=60)
          CGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGAT                                                                                     >  SRR4302532.5283585/1‑94 (MQ=60)
          CGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGAT                                                                                     <  SRR4302532.1180717/94‑1 (MQ=60)
          CGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGAT                                                                                     <  SRR4302532.2910199/94‑1 (MQ=60)
              GCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAG                                                                                 >  SRR4302532.2931348/1‑94 (MQ=60)
              GCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAG                                                                                 >  SRR4302532.5987603/1‑94 (MQ=60)
               CATGCGAAAGAAGTGACTGAGCAGCGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGGGATTCATGCCCGGATGATGCAGC                                                                                <  SRR4302532.4542651/94‑1 (MQ=60)
               CATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGC                                                                                >  SRR4302532.5097440/1‑94 (MQ=60)
                ATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCA                                                                               >  SRR4302532.5902880/1‑94 (MQ=60)
                 TGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCAC                                                                              <  SRR4302532.4442291/94‑1 (MQ=60)
                  GCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACT                                                                             >  SRR4302532.3097626/1‑94 (MQ=60)
                  GCGAAAGAAGCCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACA                                                                             <  SRR4302532.1522845/94‑1 (MQ=60)
                   CGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACAT                                                                            >  SRR4302532.2979468/1‑94 (MQ=60)
                    GAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATC                                                                           <  SRR4302532.6328090/94‑1 (MQ=60)
                    GAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATC                                                                           >  SRR4302532.5529867/1‑94 (MQ=60)
                    GAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATC                                                                           >  SRR4302532.3357279/1‑94 (MQ=60)
                     AAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCC                                                                          <  SRR4302532.845126/94‑1 (MQ=60)
                     AAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCC                                                                          >  SRR4302532.1295530/1‑94 (MQ=60)
                     AAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCC                                                                          <  SRR4302532.1367879/94‑1 (MQ=60)
                         AAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTA                                                                      >  SRR4302532.2682556/1‑94 (MQ=60)
                           GTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAA                                                                    <  SRR4302532.3934591/94‑1 (MQ=60)
                            TCACTGCGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAG                                                                   <  SRR4302532.1486580/94‑1 (MQ=60)
                            TCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAG                                                                   <  SRR4302532.1079381/94‑1 (MQ=60)
                             CACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGA                                                                  <  SRR4302532.1133196/94‑1 (MQ=60)
                             CACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGA                                                                  >  SRR4302532.3045170/1‑94 (MQ=60)
                             CACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGA                                                                  <  SRR4302532.3795212/94‑1 (MQ=60)
                             CACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGA                                                                  >  SRR4302532.488932/1‑94 (MQ=60)
                              ACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGAT                                                                 >  SRR4302532.5354330/1‑94 (MQ=60)
                              ACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGAT                                                                 >  SRR4302532.1199529/1‑94 (MQ=60)
                                 GAGCACCGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCC                                                              <  SRR4302532.400680/94‑1 (MQ=60)
                                  AGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCG                                                             <  SRR4302532.5128821/94‑1 (MQ=60)
                                  AGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCG                                                             <  SRR4302532.4143627/94‑1 (MQ=60)
                                     AACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAG                                                          <  SRR4302532.3423039/94‑1 (MQ=60)
                                     AACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAG                                                          >  SRR4302532.720935/1‑94 (MQ=60)
                                     AACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAG                                                          >  SRR4302532.5472063/1‑94 (MQ=60)
                                        CCCGCCCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGC                                                       <  SRR4302532.2647540/94‑1 (MQ=60)
                                         CCGCGAACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATTCCCGGATGATGCAGAACATCCATTAAAGATCCCGCAGCGCC                                                      <  SRR4302532.4097311/94‑1 (MQ=60)
                                           GCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAG                                                    <  SRR4302532.592788/94‑1 (MQ=60)
                                           GCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGGGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAG                                                    >  SRR4302532.1181418/1‑94 (MQ=60)
                                            CGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGT                                                   >  SRR4302532.2013726/1‑94 (MQ=60)
                                             CCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTT                                                  <  SRR4302532.5395164/94‑1 (MQ=60)
                                               ACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTT                                                >  SRR4302532.3006745/1‑94 (MQ=60)
                                               ACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTT                                                <  SRR4302532.157807/94‑1 (MQ=60)
                                               ACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTT                                                >  SRR4302532.496534/1‑94 (MQ=60)
                                               ACTCAACCGCCAGTATTCCTTCCGTAATTTCCTCTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGGGCCAGTTTT                                                <  SRR4302532.157806/94‑1 (MQ=60)
                                                CTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTC                                               <  SRR4302532.4187544/94‑1 (MQ=60)
                                                CTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTC                                               >  SRR4302532.4873417/1‑94 (MQ=60)
                                                CTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTC                                               <  SRR4302532.5291724/94‑1 (MQ=60)
                                                CTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTC                                               >  SRR4302532.3810768/1‑94 (MQ=60)
                                                 TCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCG                                              >  SRR4302532.4589489/1‑94 (MQ=60)
                                                 TCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCG                                              <  SRR4302532.6114907/94‑1 (MQ=60)
                                                  CATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGC                                             <  SRR4302532.5503114/94‑1 (MQ=60)
                                                   ATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCC                                            >  SRR4302532.3826846/1‑94 (MQ=60)
                                                    TCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGT                                           >  SRR4302532.494456/1‑94 (MQ=60)
                                                     CCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTC                                          >  SRR4302532.1377040/1‑94 (MQ=60)
                                                      CGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCA                                         >  SRR4302532.1601020/1‑94 (MQ=60)
                                                      CGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCA                                         >  SRR4302532.6010551/1‑94 (MQ=60)
                                                        CCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACG                                       >  SRR4302532.3470210/1‑94 (MQ=60)
                                                         CAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGC                                      >  SRR4302532.5305419/1‑94 (MQ=60)
                                                          AGTATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCG                                     >  SRR4302532.2367193/1‑94 (MQ=60)
                                                          AGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCG                                     <  SRR4302532.6261036/94‑1 (MQ=60)
                                                           GTATTCCTTCCGTAATTTTCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCTCGTCACGCGC                                    >  SRR4302532.3995791/1‑94 (MQ=60)
                                                            TATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCA                                   >  SRR4302532.552427/1‑94 (MQ=60)
                                                             ATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCAC                                  >  SRR4302532.3257112/1‑94 (MQ=60)
                                                             ATTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCAC                                  >  SRR4302532.1139096/1‑94 (MQ=60)
                                                             ATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCAC                                  >  SRR4302532.4157162/1‑94 (MQ=60)
                                                             ATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCAC                                  >  SRR4302532.83450/1‑94 (MQ=60)
                                                             ATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCAC                                  >  SRR4302532.3480588/1‑94 (MQ=60)
                                                              TTCCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACC                                 >  SRR4302532.852645/1‑94 (MQ=60)
                                                              TTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACC                                 >  SRR4302532.611266/1‑94 (MQ=60)
                                                              TTCCTTCCGTAATTTCCACTCGGCGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGAAGCGCCAGTTTTCGCGTCACGCTCACC                                 >  SRR4302532.611263/1‑94 (MQ=60)
                                                               TCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCA                                <  SRR4302532.2016384/94‑1 (MQ=60)
                                                                CCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAA                               >  SRR4302532.1236102/1‑94 (MQ=60)
                                                                CCTTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGGGTTCGCGTCACGCGCACCAA                               >  SRR4302532.1700384/1‑94 (MQ=60)
                                                                 CTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCCAA                              >  SRR4302532.5787427/1‑94 (MQ=60)
                                                                  TTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAG                             <  SRR4302532.2209331/94‑1 (MQ=60)
                                                                  TTCCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAG                             >  SRR4302532.3206848/1‑94 (MQ=60)
                                                                  TTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAG                             >  SRR4302532.6359728/1‑94 (MQ=60)
                                                                   TCCGTAATTTCGACTCGGGGATTCATACCCGGATGATGCAGCACATCCAGTAAAGAGCCCGCAGCGCCAGTTTTCGCGTGACGCGCACCAAAGA                            >  SRR4302532.215179/1‑94 (MQ=60)
                                                                   TCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGA                            >  SRR4302532.215178/1‑94 (MQ=60)
                                                                    CCGTAATTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGAC                           <  SRR4302532.4491803/94‑1 (MQ=60)
                                                                    CCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGAC                           >  SRR4302532.3761738/1‑94 (MQ=60)
                                                                        aagtgcaACTCGGTGATTCATACCCGGATGAAGCAGCACATCCATTAAAAATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACG                       <  SRR4302532.5051561/87‑1 (MQ=60)
                                                                        TATTTCCCCTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACG                       <  SRR4302532.1699350/94‑1 (MQ=60)
                                                                         ATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGC                      <  SRR4302532.1536068/94‑1 (MQ=60)
                                                                          TTTCCTCCCGGTGATTCATTCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCG                     <  SRR4302532.1962706/94‑1 (MQ=60)
                                                                          TTTCCACTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCG                     <  SRR4302532.4840952/94‑1 (MQ=60)
                                                                          TTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCATCACGCGCACCAAAGACCACGCG                     <  SRR4302532.4615744/94‑1 (MQ=60)
                                                                            TCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGAC                   >  SRR4302532.1682749/1‑94 (MQ=60)
                                                                              CACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCA                 <  SRR4302532.1253662/94‑1 (MQ=60)
                                                                               CCTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAA                <  SRR4302532.5193882/94‑1 (MQ=60)
                                                                               ACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAA                >  SRR4302532.4564298/1‑94 (MQ=60)
                                                                                CTCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAAT               >  SRR4302532.2363410/1‑94 (MQ=60)
                                                                                CTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAAT               >  SRR4302532.147197/1‑94 (MQ=60)
                                                                                 TCGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTCCGCGTCACGCGCACCAAAGACCACGCGACCAATG              <  SRR4302532.4560338/94‑1 (MQ=60)
                                                                                 TCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATG              <  SRR4302532.4114727/94‑1 (MQ=60)
                                                                                  CGGTGATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGC             >  SRR4302532.142922/1‑94 (MQ=60)
                                                                                  CGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGC             <  SRR4302532.2570042/94‑1 (MQ=60)
                                                                                   GGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCGCCAAAGACCACGCGACCcctgca            >  SRR4302532.533421/1‑88 (MQ=60)
                                                                                   GGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCG            >  SRR4302532.1467490/1‑94 (MQ=60)
                                                                                   GGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCG            <  SRR4302532.5414100/94‑1 (MQ=60)
                                                                                      GATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCGACT         <  SRR4302532.4991593/94‑1 (MQ=60)
                                                                                      GATTCATGCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCGACT         >  SRR4302532.1399569/1‑94 (MQ=60)
                                                                                       ATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCGACTG        >  SRR4302532.1004267/1‑94 (MQ=60)
                                                                                           ATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCGACTGTGGA    <  SRR4302532.1058137/94‑1 (MQ=60)
                                                                                           ATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCGACTGTGGA    <  SRR4302532.4763990/94‑1 (MQ=60)
                                                                                             GCCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCGACTGTGGATC  >  SRR4302532.1083117/1‑94 (MQ=60)
                                                                                             |                                                                                             
AATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCGACTGTGGATC  >  NC_000913/2695410‑2695596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑